Wall clock time and date at job start Sun Mar 7 2021 04:33:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86299 * 109.47377 * 2 1 4 4 C 1.50699 * 109.46922 * 239.99776 * 2 1 3 5 5 C 1.34857 * 125.88838 * 120.02277 * 4 2 1 6 6 C 1.40892 * 107.41422 * 179.97438 * 5 4 2 7 7 C 1.34841 * 107.41834 * 0.02562 * 6 5 4 8 8 C 1.50708 * 125.89040 * 179.97438 * 7 6 5 9 9 C 1.50697 * 109.47244 * 85.02418 * 8 7 6 10 10 O 1.21276 * 119.99784 * 0.02562 * 9 8 7 11 11 N 1.34779 * 119.99934 * 180.02562 * 9 8 7 12 12 C 1.46499 * 119.99733 * 180.02562 * 11 9 8 13 13 H 1.09003 * 112.85279 * 23.79582 * 12 11 9 14 14 C 1.53783 * 113.61522 * 154.99853 * 12 11 9 15 15 C 1.53782 * 87.07940 * 140.06003 * 14 12 11 16 16 H 1.08997 * 113.61229 * 89.20487 * 15 14 12 17 17 C 1.50704 * 113.61362 * 220.01870 * 15 14 12 18 18 N 1.30504 * 125.64940 * 265.02906 * 17 15 14 19 19 C 1.34120 * 109.25474 * 179.73737 * 18 17 15 20 20 C 1.34663 * 108.02403 * 359.97438 * 19 18 17 21 21 N 1.35042 * 125.65148 * 84.72260 * 17 15 14 22 22 C 1.53775 * 87.08603 * 334.56907 * 15 14 12 23 23 N 1.36339 * 125.89421 * 300.31032 * 4 2 1 24 24 H 0.96696 * 114.00382 * 59.99757 * 1 2 3 25 25 H 1.09002 * 109.47395 * 120.00494 * 2 1 3 26 26 H 1.48497 * 109.99719 * 59.99854 * 3 2 1 27 27 H 1.48494 * 110.00086 * 181.31841 * 3 2 1 28 28 H 1.07994 * 126.29012 * 359.96277 * 5 4 2 29 29 H 1.08000 * 126.28870 * 179.97438 * 6 5 4 30 30 H 1.09003 * 109.46625 * 325.02647 * 8 7 6 31 31 H 1.09003 * 109.47228 * 205.02770 * 8 7 6 32 32 H 0.96994 * 119.99824 * 359.97438 * 11 9 8 33 33 H 1.08998 * 113.61106 * 25.51511 * 14 12 11 34 34 H 1.08994 * 113.61269 * 254.61070 * 14 12 11 35 35 H 1.08010 * 125.99023 * 180.02562 * 19 18 17 36 36 H 1.08005 * 126.59404 * 180.02562 * 20 19 18 37 37 H 0.96999 * 126.39641 * 0.25473 * 21 17 15 38 38 H 1.08992 * 113.62117 * 139.98189 * 22 15 14 39 39 H 1.09006 * 113.61193 * 270.88609 * 22 15 14 40 40 H 0.96999 * 125.63596 * 0.02562 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7102 -0.1728 -2.1911 6 6 2.9455 -1.1750 -3.1531 7 6 2.3010 -2.2865 -2.7440 8 6 2.2751 -3.6091 -3.4661 9 6 3.4929 -4.4120 -3.0877 10 8 4.3019 -3.9555 -2.3080 11 7 3.6829 -5.6374 -3.6157 12 6 4.8665 -6.4182 -3.2473 13 1 5.2829 -6.1264 -2.2832 14 6 4.6757 -7.9363 -3.4020 15 6 6.1124 -7.9817 -3.9486 16 1 6.8692 -8.1190 -3.1763 17 6 6.2861 -8.9237 -5.1121 18 7 6.6927 -10.1614 -5.0346 19 6 6.7216 -10.6953 -6.2646 20 6 6.3171 -9.7530 -7.1375 21 7 6.0413 -8.6288 -6.4070 22 6 5.9158 -6.5152 -4.3674 23 7 1.6722 -2.0059 -1.5672 24 1 -0.3934 0.4417 -0.7650 25 1 1.7924 -0.5139 0.8899 26 1 1.5615 2.4678 1.2085 27 1 3.5346 1.7702 -0.0321 28 1 3.0846 0.8398 -2.2182 29 1 3.5332 -1.0716 -4.0532 30 1 2.2743 -3.4354 -4.5422 31 1 1.3762 -4.1584 -3.1860 32 1 3.0356 -6.0026 -4.2389 33 1 3.9196 -8.2085 -4.1384 34 1 4.5525 -8.4596 -2.4539 35 1 7.0168 -11.7045 -6.5117 36 1 6.2278 -9.8630 -8.2082 37 1 5.7279 -7.7791 -6.7544 38 1 6.7935 -5.8915 -4.1987 39 1 5.4986 -6.3990 -5.3678 40 1 1.1317 -2.6262 -1.0533 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14772358_14644196.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:33:57 Heat of formation + Delta-G solvation = 65.301180 kcal Electronic energy + Delta-G solvation = -23503.710765 eV Core-core repulsion = 19901.619992 eV Total energy + Delta-G solvation = -3602.090773 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 303.137 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -43.12920 -42.31551 -41.01184 -39.27673 -37.68577 -34.73922 -33.45651 -33.09311 -31.87634 -30.65847 -29.38865 -27.00226 -26.31051 -24.97154 -22.76001 -22.17867 -21.56422 -21.31375 -21.14522 -20.72504 -19.14550 -18.90096 -18.17721 -17.38022 -16.80829 -16.60208 -16.34509 -16.18808 -15.82641 -15.27724 -15.19746 -14.94967 -14.69929 -14.53850 -14.38582 -14.13539 -13.97930 -13.85162 -13.78386 -13.74232 -13.36888 -12.87724 -12.55962 -12.15307 -12.01710 -11.89644 -11.84438 -10.99750 -10.98350 -10.93327 -10.62477 -10.19355 -9.73519 -9.36881 -8.91589 -4.96857 1.04132 1.13806 1.27213 1.53796 1.72233 1.86749 1.99475 2.06947 2.16680 2.24468 2.49230 3.16555 3.26118 3.44594 3.45048 3.56847 3.61802 3.79317 3.81998 3.91609 3.96974 4.08462 4.29649 4.34356 4.44117 4.45198 4.47569 4.51332 4.57130 4.65777 4.73457 4.79861 4.80187 4.99946 5.13907 5.29925 5.33198 5.36040 5.77966 6.03371 6.17850 6.33271 6.33477 6.51777 6.64362 7.13157 7.13401 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.050 4.050 3 Si 0.720 3.280 4 C -0.009 4.009 5 C -0.188 4.188 6 C -0.173 4.173 7 C 0.034 3.966 8 C -0.072 4.072 9 C 0.512 3.488 10 O -0.520 6.520 11 N -0.724 5.724 12 C 0.127 3.873 13 H 0.122 0.878 14 C -0.133 4.133 15 C -0.022 4.022 16 H 0.125 0.875 17 C 0.219 3.781 18 N -0.486 5.486 19 C -0.026 4.026 20 C -0.056 4.056 21 N -0.566 5.566 22 C -0.150 4.150 23 N -0.535 5.535 24 H 0.381 0.619 25 H 0.110 0.890 26 H -0.256 1.256 27 H -0.255 1.255 28 H 0.141 0.859 29 H 0.136 0.864 30 H 0.117 0.883 31 H 0.100 0.900 32 H 0.401 0.599 33 H 0.087 0.913 34 H 0.087 0.913 35 H 0.171 0.829 36 H 0.178 0.822 37 H 0.417 0.583 38 H 0.086 0.914 39 H 0.080 0.920 40 H 0.413 0.587 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.081 0.811 -6.184 7.453 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.160 4.160 3 Si 0.620 3.380 4 C -0.123 4.123 5 C -0.213 4.213 6 C -0.197 4.197 7 C -0.079 4.079 8 C -0.113 4.113 9 C 0.298 3.702 10 O -0.394 6.394 11 N -0.376 5.376 12 C 0.022 3.978 13 H 0.140 0.860 14 C -0.172 4.172 15 C -0.043 4.043 16 H 0.143 0.857 17 C -0.045 4.045 18 N -0.205 5.205 19 C -0.174 4.174 20 C -0.190 4.190 21 N -0.170 5.170 22 C -0.189 4.189 23 N -0.130 5.130 24 H 0.229 0.771 25 H 0.128 0.872 26 H -0.181 1.181 27 H -0.179 1.179 28 H 0.159 0.841 29 H 0.154 0.846 30 H 0.135 0.865 31 H 0.118 0.882 32 H 0.236 0.764 33 H 0.106 0.894 34 H 0.106 0.894 35 H 0.189 0.811 36 H 0.195 0.805 37 H 0.255 0.745 38 H 0.104 0.896 39 H 0.099 0.901 40 H 0.249 0.751 Dipole moment (debyes) X Y Z Total from point charges -2.772 0.875 -3.814 4.796 hybrid contribution -0.748 -0.632 -1.149 1.510 sum -3.521 0.243 -4.963 6.090 Atomic orbital electron populations 1.86478 1.17443 1.81774 1.49524 1.24851 0.84826 1.10738 0.95612 0.94148 0.81034 0.76300 0.86491 1.20831 1.05981 0.85588 0.99876 1.20655 1.04553 1.00059 0.96006 1.20578 1.04765 0.92591 1.01795 1.19454 1.02850 0.95726 0.89880 1.20136 0.97242 0.91836 1.02069 1.20672 0.87550 0.81384 0.80619 1.90777 1.45455 1.69365 1.33829 1.45969 1.25728 1.17478 1.48383 1.22444 0.85785 0.90159 0.99425 0.85989 1.23426 0.95925 0.95107 1.02733 1.20764 0.99068 0.90969 0.93487 0.85689 1.22863 1.03278 0.93596 0.84720 1.70253 1.19139 1.06101 1.25015 1.22429 1.06126 1.00555 0.88322 1.22822 1.09704 0.87496 0.98969 1.43261 1.52090 1.13783 1.07826 1.23568 1.00601 0.95389 0.99375 1.41782 1.40916 1.11096 1.19181 0.77145 0.87230 1.18086 1.17916 0.84105 0.84618 0.86487 0.88164 0.76430 0.89424 0.89403 0.81133 0.80452 0.74503 0.89572 0.90124 0.75083 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.14 12.88 -35.23 -0.45 -0.59 16 2 C -0.05 -0.02 3.08 36.01 0.11 0.09 16 3 Si 0.72 -0.41 30.59 -169.99 -5.20 -5.61 16 4 C -0.01 -0.01 6.51 -81.79 -0.53 -0.54 16 5 C -0.19 -0.31 9.37 -39.78 -0.37 -0.69 16 6 C -0.17 -0.32 10.76 -39.78 -0.43 -0.74 16 7 C 0.03 0.03 5.66 -81.79 -0.46 -0.43 16 8 C -0.07 0.18 6.24 -29.03 -0.18 0.00 16 9 C 0.51 -0.03 7.82 -10.99 -0.09 -0.12 16 10 O -0.52 -2.54 15.63 5.56 0.09 -2.45 16 11 N -0.72 2.07 5.36 -53.01 -0.28 1.78 16 12 C 0.13 -0.26 4.24 -67.11 -0.28 -0.54 16 13 H 0.12 -0.01 7.46 -51.93 -0.39 -0.40 16 14 C -0.13 0.33 7.38 -25.92 -0.19 0.14 16 15 C -0.02 0.03 4.29 -90.96 -0.39 -0.36 16 16 H 0.13 -0.13 8.14 -51.93 -0.42 -0.56 16 17 C 0.22 0.22 7.36 -155.41 -1.14 -0.92 16 18 N -0.49 -1.91 11.25 -10.81 -0.12 -2.03 16 19 C -0.03 -0.05 11.87 -17.82 -0.21 -0.26 16 20 C -0.06 0.03 12.04 -16.56 -0.20 -0.17 16 21 N -0.57 0.67 5.94 -10.23 -0.06 0.60 16 22 C -0.15 0.39 7.36 -25.92 -0.19 0.20 16 23 N -0.54 -0.48 6.07 -5.44 -0.03 -0.51 16 24 H 0.38 -1.33 8.70 45.56 0.40 -0.93 16 25 H 0.11 0.12 7.96 -51.93 -0.41 -0.29 16 26 H -0.26 -0.59 7.11 56.52 0.40 -0.18 16 27 H -0.25 -0.57 7.11 56.52 0.40 -0.17 16 28 H 0.14 0.00 6.22 -52.49 -0.33 -0.33 16 29 H 0.14 0.08 8.06 -52.49 -0.42 -0.34 16 30 H 0.12 -0.56 8.14 -51.93 -0.42 -0.98 16 31 H 0.10 -0.47 8.14 -51.93 -0.42 -0.89 16 32 H 0.40 -2.28 8.73 -40.82 -0.36 -2.63 16 33 H 0.09 -0.27 8.07 -51.93 -0.42 -0.68 16 34 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 35 H 0.17 0.01 8.06 -52.48 -0.42 -0.41 16 36 H 0.18 -0.63 8.06 -52.48 -0.42 -1.05 16 37 H 0.42 -1.70 7.53 -40.82 -0.31 -2.01 16 38 H 0.09 -0.15 8.14 -51.93 -0.42 -0.58 16 39 H 0.08 -0.32 6.64 -51.93 -0.34 -0.67 16 40 H 0.41 -0.27 8.96 -40.82 -0.37 -0.64 16 LS Contribution 341.06 15.07 5.14 5.14 Total: 0.00 -11.79 341.06 -10.59 -22.39 By element: Atomic # 1 Polarization: -9.25 SS G_CDS: -5.10 Total: -14.35 kcal Atomic # 6 Polarization: 0.20 SS G_CDS: -4.56 Total: -4.36 kcal Atomic # 7 Polarization: 0.34 SS G_CDS: -0.50 Total: -0.16 kcal Atomic # 8 Polarization: -2.68 SS G_CDS: -0.37 Total: -3.04 kcal Atomic # 14 Polarization: -0.41 SS G_CDS: -5.20 Total: -5.61 kcal Total LS contribution 5.14 Total: 5.14 kcal Total: -11.79 -10.59 -22.39 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_14644196.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 87.689 kcal (2) G-P(sol) polarization free energy of solvation -11.794 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 75.895 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.594 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.388 kcal (6) G-S(sol) free energy of system = (1) + (5) 65.301 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds