Wall clock time and date at job start Sun Mar 7 2021 04:34:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86304 * 109.47561 * 2 1 4 4 C 1.50710 * 109.46856 * 119.99818 * 2 1 3 5 5 C 1.38264 * 119.94283 * 64.99711 * 4 2 1 6 6 C 1.38141 * 120.05325 * 180.02562 * 5 4 2 7 7 C 1.38730 * 119.94727 * 359.97438 * 6 5 4 8 8 O 1.35901 * 120.05985 * 180.02562 * 7 6 5 9 9 C 1.42899 * 117.00329 * 179.97438 * 8 7 6 10 10 C 1.50697 * 109.47192 * 179.97438 * 9 8 7 11 11 C 1.36412 * 125.80030 * 90.00038 * 10 9 8 12 12 C 1.47378 * 127.19219 * 0.02562 * 11 10 9 13 13 O 1.21606 * 120.00243 * 359.70190 * 12 11 10 14 14 N 1.34777 * 119.99816 * 179.70563 * 12 11 10 15 15 C 1.46502 * 119.99843 * 179.97438 * 14 12 11 16 16 H 1.09000 * 112.90816 * 23.74366 * 15 14 12 17 17 C 1.53784 * 113.61491 * 154.99806 * 15 14 12 18 18 C 1.53787 * 87.07923 * 139.97939 * 17 15 14 19 19 H 1.09004 * 113.60869 * 89.20131 * 18 17 15 20 20 C 1.50694 * 113.61364 * 220.01686 * 18 17 15 21 21 N 1.30505 * 125.65507 * 265.02959 * 20 18 17 22 22 C 1.34119 * 109.25935 * 180.02562 * 21 20 18 23 23 C 1.34670 * 108.02478 * 359.97438 * 22 21 20 24 24 N 1.35048 * 125.64927 * 84.72345 * 20 18 17 25 25 C 1.53778 * 87.08035 * 334.56830 * 18 17 15 26 26 C 1.47029 * 105.61498 * 179.75080 * 11 10 9 27 27 C 1.34174 * 105.95042 * 0.23260 * 26 11 10 28 28 O 1.33657 * 125.80344 * 270.14158 * 10 9 8 29 29 C 1.38731 * 119.88751 * 0.27314 * 7 6 5 30 30 C 1.38148 * 119.94036 * 359.47718 * 29 7 6 31 31 H 0.96700 * 114.00154 * 300.01109 * 1 2 3 32 32 H 1.08993 * 109.47298 * 239.99121 * 2 1 3 33 33 H 1.48501 * 109.99897 * 178.68047 * 3 2 1 34 34 H 1.48494 * 109.99693 * 299.99800 * 3 2 1 35 35 H 1.07997 * 119.97310 * 0.02562 * 5 4 2 36 36 H 1.08008 * 120.02623 * 179.97438 * 6 5 4 37 37 H 1.09009 * 109.46570 * 60.00189 * 9 8 7 38 38 H 1.08997 * 109.47088 * 300.00458 * 9 8 7 39 39 H 0.97002 * 120.00010 * 359.97438 * 14 12 11 40 40 H 1.09004 * 113.61451 * 25.43425 * 17 15 14 41 41 H 1.08994 * 113.61477 * 254.52726 * 17 15 14 42 42 H 1.08000 * 125.99081 * 179.97438 * 22 21 20 43 43 H 1.07998 * 126.59966 * 179.97438 * 23 22 21 44 44 H 0.96994 * 126.39658 * 359.97438 * 24 20 18 45 45 H 1.08999 * 113.61111 * 139.98327 * 25 18 17 46 46 H 1.08999 * 113.61280 * 270.79710 * 25 18 17 47 47 H 1.08002 * 127.02203 * 180.24494 * 26 11 10 48 48 H 1.07999 * 125.43091 * 180.02562 * 27 26 11 49 49 H 1.07996 * 120.03248 * 179.72047 * 29 7 6 50 50 H 1.08009 * 119.97201 * 180.22670 * 30 29 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 1.6838 -2.0605 1.3974 6 6 2.1427 -2.7138 2.5247 7 6 2.8528 -2.0144 3.4897 8 8 3.3058 -2.6549 4.5993 9 6 4.0299 -1.8719 5.5504 10 6 4.4485 -2.7449 6.7052 11 6 5.6154 -3.4458 6.7936 12 6 6.6999 -3.4998 5.7972 13 8 6.6022 -2.8763 4.7577 14 7 7.8000 -4.2402 6.0380 15 6 8.8779 -4.2943 5.0472 16 1 8.8907 -3.4275 4.3865 17 6 10.2523 -4.6299 5.6499 18 6 10.4924 -5.5103 4.4120 19 1 10.9480 -4.9762 3.5782 20 6 11.1858 -6.8118 4.7222 21 7 12.4704 -7.0274 4.6415 22 6 12.7287 -8.2964 4.9905 23 6 11.5600 -8.8897 5.2997 24 7 10.5815 -7.9467 5.1352 25 6 8.9638 -5.6373 4.3031 26 6 5.5680 -4.1309 8.0937 27 6 4.3964 -3.7865 8.6495 28 8 3.7384 -2.9660 7.8158 29 6 3.0953 -0.6587 3.3224 30 6 2.6387 -0.0111 2.1908 31 1 -0.3933 0.4418 0.7650 32 1 1.7923 -0.5139 -0.8898 33 1 3.5347 1.7701 0.0321 34 1 1.5617 2.4678 -1.2085 35 1 1.1314 -2.6047 0.6457 36 1 1.9488 -3.7684 2.6547 37 1 3.3940 -1.0657 5.9166 38 1 4.9147 -1.4491 5.0746 39 1 7.8781 -4.7373 6.8673 40 1 10.1949 -5.1929 6.5815 41 1 10.9226 -3.7728 5.7127 42 1 13.7033 -8.7611 5.0187 43 1 11.4216 -9.9119 5.6197 44 1 9.6313 -8.0710 5.2851 45 1 8.5939 -5.5934 3.2788 46 1 8.5543 -6.4765 4.8654 47 1 6.3223 -4.7788 8.5152 48 1 4.0399 -4.1166 9.6141 49 1 3.6439 -0.1109 4.0743 50 1 2.8304 1.0436 2.0583 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14772358_4549634.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:34:35 Heat of formation + Delta-G solvation = 37.523782 kcal Electronic energy + Delta-G solvation = -35492.884349 eV Core-core repulsion = 30649.208403 eV Total energy + Delta-G solvation = -4843.675945 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.156 amu Computer time = 1.45 seconds Orbital eigenvalues (eV) -43.80956 -43.11723 -41.22934 -41.01002 -39.31691 -39.07702 -37.13241 -34.92092 -33.94680 -33.43891 -32.84652 -31.94617 -31.35757 -30.61400 -28.07840 -26.99465 -26.49794 -26.04143 -24.44205 -23.76558 -22.81172 -22.39430 -22.20030 -21.53534 -21.35266 -20.57241 -19.43263 -19.21625 -19.08742 -18.23125 -17.46538 -17.26459 -17.21610 -16.92189 -16.64627 -16.59761 -16.38121 -15.96033 -15.82351 -15.76248 -15.73056 -15.42301 -14.94613 -14.85824 -14.64379 -14.57794 -14.31148 -14.21945 -14.13519 -13.92646 -13.76079 -13.67007 -13.55862 -13.42530 -13.12668 -12.58349 -12.18471 -12.14538 -12.02436 -11.99229 -11.84111 -11.70297 -11.06260 -11.03696 -10.97833 -10.97552 -10.37078 -10.22978 -9.98485 -9.93515 -9.36055 -9.15205 -5.00899 -0.03256 0.35261 0.36782 0.85081 1.05119 1.34276 1.42713 1.67438 1.94854 2.01485 2.09121 2.13669 2.17816 2.47189 2.72291 3.16003 3.23021 3.26683 3.46540 3.52256 3.53112 3.57535 3.65076 3.71084 3.81153 3.83812 3.89453 3.94661 4.09235 4.10731 4.24734 4.32762 4.34935 4.40066 4.46256 4.48766 4.51204 4.53601 4.54726 4.66651 4.67738 4.71403 4.74396 4.80700 4.99941 5.00146 5.02463 5.14608 5.20970 5.31789 5.35336 5.55073 5.74010 5.78022 5.78750 6.33323 6.33899 6.34163 6.62448 7.07929 7.14061 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.062 4.062 3 Si 0.683 3.317 4 C -0.158 4.158 5 C -0.052 4.052 6 C -0.148 4.148 7 C 0.142 3.858 8 O -0.304 6.304 9 C 0.135 3.865 10 C 0.067 3.933 11 C -0.212 4.212 12 C 0.591 3.409 13 O -0.530 6.530 14 N -0.712 5.712 15 C 0.128 3.872 16 H 0.126 0.874 17 C -0.132 4.132 18 C -0.022 4.022 19 H 0.126 0.874 20 C 0.219 3.781 21 N -0.485 5.485 22 C -0.026 4.026 23 C -0.056 4.056 24 N -0.566 5.566 25 C -0.150 4.150 26 C -0.197 4.197 27 C -0.014 4.014 28 O -0.164 6.164 29 C -0.202 4.202 30 C -0.073 4.073 31 H 0.378 0.622 32 H 0.112 0.888 33 H -0.258 1.258 34 H -0.255 1.255 35 H 0.133 0.867 36 H 0.133 0.867 37 H 0.084 0.916 38 H 0.116 0.884 39 H 0.402 0.598 40 H 0.087 0.913 41 H 0.089 0.911 42 H 0.171 0.829 43 H 0.178 0.822 44 H 0.417 0.583 45 H 0.086 0.914 46 H 0.080 0.920 47 H 0.161 0.839 48 H 0.214 0.786 49 H 0.132 0.868 50 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.510 -1.098 6.833 7.084 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.173 4.173 3 Si 0.585 3.415 4 C -0.159 4.159 5 C -0.070 4.070 6 C -0.167 4.167 7 C 0.097 3.903 8 O -0.218 6.218 9 C 0.060 3.940 10 C 0.013 3.987 11 C -0.217 4.217 12 C 0.379 3.621 13 O -0.408 6.408 14 N -0.363 5.363 15 C 0.023 3.977 16 H 0.143 0.857 17 C -0.171 4.171 18 C -0.042 4.042 19 H 0.144 0.856 20 C -0.045 4.045 21 N -0.204 5.204 22 C -0.174 4.174 23 C -0.190 4.190 24 N -0.170 5.170 25 C -0.190 4.190 26 C -0.216 4.216 27 C -0.080 4.080 28 O -0.059 6.059 29 C -0.220 4.220 30 C -0.091 4.091 31 H 0.226 0.774 32 H 0.130 0.870 33 H -0.182 1.182 34 H -0.180 1.180 35 H 0.151 0.849 36 H 0.151 0.849 37 H 0.102 0.898 38 H 0.134 0.866 39 H 0.236 0.764 40 H 0.106 0.894 41 H 0.108 0.892 42 H 0.189 0.811 43 H 0.195 0.805 44 H 0.255 0.745 45 H 0.105 0.895 46 H 0.099 0.901 47 H 0.178 0.822 48 H 0.231 0.769 49 H 0.150 0.850 50 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -0.645 0.124 4.983 5.026 hybrid contribution -0.486 -1.919 0.962 2.201 sum -1.131 -1.795 5.945 6.312 Atomic orbital electron populations 1.86499 1.17239 1.81697 1.49235 1.24965 0.85108 1.09862 0.97410 0.94869 0.81145 0.78246 0.87215 1.20224 1.02700 0.95190 0.97791 1.20821 0.96508 0.93482 0.96153 1.20484 1.01697 1.00806 0.93716 1.18947 0.93882 0.90952 0.86519 1.86083 1.68658 1.37880 1.29158 1.21118 0.98392 0.90357 0.84086 1.21967 0.90094 0.99026 0.87565 1.21213 0.97685 1.05119 0.97675 1.17217 0.81093 0.78624 0.85156 1.90807 1.79465 1.44288 1.26238 1.45717 1.18358 1.50037 1.22162 1.22492 0.85331 0.98743 0.91122 0.85662 1.23431 0.96024 1.00181 0.97509 1.20762 0.93745 0.89641 1.00086 0.85602 1.22860 0.88927 0.89571 1.03117 1.70251 1.12604 1.17253 1.20331 1.22426 0.98485 0.91056 1.05454 1.22824 0.88888 0.96407 1.10879 1.43269 1.10583 1.10820 1.52291 1.23578 0.94403 0.98344 1.02671 1.22878 0.99780 1.04609 0.94351 1.24064 0.92923 0.94489 0.96538 1.83805 1.43852 1.53252 1.25026 1.21183 1.06380 0.93721 1.00756 1.20760 0.96353 0.98997 0.92957 0.77431 0.87044 1.18240 1.18002 0.84921 0.84944 0.89750 0.86635 0.76351 0.89435 0.89228 0.81136 0.80475 0.74511 0.89492 0.90144 0.82167 0.76905 0.84984 0.85306 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.43 12.83 -35.23 -0.45 -0.88 16 2 C -0.06 -0.03 2.80 36.01 0.10 0.07 16 3 Si 0.68 -0.29 29.80 -169.99 -5.07 -5.36 16 4 C -0.16 -0.16 5.35 -104.60 -0.56 -0.72 16 5 C -0.05 -0.08 9.68 -39.61 -0.38 -0.46 16 6 C -0.15 -0.33 9.99 -39.44 -0.39 -0.72 16 7 C 0.14 0.36 6.69 -39.22 -0.26 0.10 16 8 O -0.30 -0.96 10.12 -19.43 -0.20 -1.16 16 9 C 0.14 0.14 4.74 36.00 0.17 0.31 16 10 C 0.07 0.09 7.00 -34.97 -0.24 -0.15 16 11 C -0.21 -0.17 6.31 -103.27 -0.65 -0.82 16 12 C 0.59 0.94 7.81 -12.54 -0.10 0.84 16 13 O -0.53 -2.46 14.45 5.27 0.08 -2.39 16 14 N -0.71 1.07 5.35 -54.10 -0.29 0.78 16 15 C 0.13 -0.21 4.24 -67.12 -0.28 -0.50 16 16 H 0.13 -0.04 7.46 -51.93 -0.39 -0.43 16 17 C -0.13 0.31 7.38 -25.91 -0.19 0.12 16 18 C -0.02 0.03 4.29 -90.96 -0.39 -0.36 16 19 H 0.13 -0.14 8.14 -51.93 -0.42 -0.56 16 20 C 0.22 0.25 7.36 -155.41 -1.14 -0.89 16 21 N -0.49 -1.93 11.25 -10.82 -0.12 -2.05 16 22 C -0.03 -0.05 11.87 -17.82 -0.21 -0.27 16 23 C -0.06 0.02 12.04 -16.56 -0.20 -0.18 16 24 N -0.57 0.53 5.94 -10.23 -0.06 0.46 16 25 C -0.15 0.33 7.35 -25.92 -0.19 0.14 16 26 C -0.20 0.39 10.60 -37.45 -0.40 0.00 16 27 C -0.01 0.03 12.03 29.30 0.35 0.38 16 28 O -0.16 -0.10 10.52 7.66 0.08 -0.02 16 29 C -0.20 -0.21 9.04 -39.43 -0.36 -0.57 16 30 C -0.07 -0.03 8.66 -39.61 -0.34 -0.37 16 31 H 0.38 -1.16 8.70 45.56 0.40 -0.76 16 32 H 0.11 0.10 7.96 -51.93 -0.41 -0.31 16 33 H -0.26 -0.53 7.11 56.52 0.40 -0.13 16 34 H -0.25 -0.71 7.11 56.52 0.40 -0.31 16 35 H 0.13 0.08 8.06 -52.49 -0.42 -0.34 16 36 H 0.13 0.18 8.06 -52.48 -0.42 -0.25 16 37 H 0.08 -0.10 7.65 -51.92 -0.40 -0.50 16 38 H 0.12 0.15 6.02 -51.93 -0.31 -0.16 16 39 H 0.40 -1.56 7.90 -40.82 -0.32 -1.88 16 40 H 0.09 -0.24 8.07 -51.93 -0.42 -0.66 16 41 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 42 H 0.17 0.02 8.06 -52.49 -0.42 -0.40 16 43 H 0.18 -0.59 8.06 -52.49 -0.42 -1.02 16 44 H 0.42 -1.53 7.53 -40.82 -0.31 -1.84 16 45 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 46 H 0.08 -0.27 6.64 -51.93 -0.34 -0.61 16 47 H 0.16 -0.80 7.74 -52.49 -0.41 -1.20 16 48 H 0.21 -1.27 8.06 -52.49 -0.42 -1.70 16 49 H 0.13 -0.13 6.30 -52.49 -0.33 -0.46 16 50 H 0.13 -0.23 4.90 -52.48 -0.26 -0.48 16 LS Contribution 421.30 15.07 6.35 6.35 Total: 0.00 -12.06 421.30 -11.44 -23.50 By element: Atomic # 1 Polarization: -9.09 SS G_CDS: -6.08 Total: -15.17 kcal Atomic # 6 Polarization: 1.62 SS G_CDS: -5.68 Total: -4.06 kcal Atomic # 7 Polarization: -0.34 SS G_CDS: -0.47 Total: -0.81 kcal Atomic # 8 Polarization: -3.96 SS G_CDS: -0.49 Total: -4.45 kcal Atomic # 14 Polarization: -0.29 SS G_CDS: -5.07 Total: -5.36 kcal Total LS contribution 6.35 Total: 6.35 kcal Total: -12.06 -11.44 -23.50 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_4549634.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 61.024 kcal (2) G-P(sol) polarization free energy of solvation -12.059 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 48.965 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.441 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.500 kcal (6) G-S(sol) free energy of system = (1) + (5) 37.524 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds