Wall clock time and date at job start Sun Mar 7 2021 04:34:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86299 * 109.47117 * 2 1 4 4 C 1.50704 * 109.47144 * 239.99915 * 2 1 3 5 5 C 1.38243 * 119.94208 * 120.00400 * 4 2 1 6 6 C 1.38163 * 120.05315 * 180.25725 * 5 4 2 7 7 C 1.38717 * 119.94355 * 359.48554 * 6 5 4 8 8 O 1.35897 * 120.05477 * 180.25503 * 7 6 5 9 9 C 1.42901 * 117.00082 * 0.27786 * 8 7 6 10 10 C 1.50700 * 109.47109 * 179.97438 * 9 8 7 11 11 O 1.21282 * 120.00139 * 0.02562 * 10 9 8 12 12 N 1.34780 * 120.00237 * 179.97438 * 10 9 8 13 13 C 1.46498 * 119.99791 * 180.02562 * 12 10 9 14 14 H 1.08994 * 112.85290 * 334.66653 * 13 12 10 15 15 C 1.53783 * 113.61338 * 105.87052 * 13 12 10 16 16 C 1.53953 * 87.02253 * 139.94661 * 15 13 12 17 17 H 1.09004 * 113.53436 * 89.18427 * 16 15 13 18 18 C 1.50695 * 113.74302 * 220.05324 * 16 15 13 19 19 N 1.30496 * 125.65198 * 192.61957 * 18 16 15 20 20 C 1.34127 * 109.25746 * 180.02562 * 19 18 16 21 21 C 1.34667 * 108.02278 * 0.02562 * 20 19 18 22 22 N 1.35043 * 125.65099 * 12.31615 * 18 16 15 23 23 C 1.53783 * 87.10891 * 334.63322 * 16 15 13 24 24 C 1.38752 * 119.88567 * 0.53486 * 7 6 5 25 25 N 1.48010 * 120.02406 * 179.74536 * 24 7 6 26 26 O 1.21804 * 119.99519 * 179.97438 * 25 24 7 27 27 O 1.21797 * 119.99838 * 359.97438 * 25 24 7 28 28 C 1.38113 * 119.94692 * 359.71857 * 24 7 6 29 29 H 0.96700 * 113.99605 * 59.99732 * 1 2 3 30 30 H 1.09001 * 109.47135 * 120.00260 * 2 1 3 31 31 H 1.48497 * 109.99986 * 60.00196 * 3 2 1 32 32 H 1.48507 * 109.99937 * 181.31747 * 3 2 1 33 33 H 1.08002 * 119.97116 * 359.97147 * 5 4 2 34 34 H 1.07998 * 120.03041 * 179.72208 * 6 5 4 35 35 H 1.08993 * 109.47337 * 299.99436 * 9 8 7 36 36 H 1.09002 * 109.47080 * 60.00398 * 9 8 7 37 37 H 0.97000 * 119.99575 * 0.02562 * 12 10 9 38 38 H 1.09006 * 113.60634 * 254.52344 * 15 13 12 39 39 H 1.08997 * 113.61650 * 25.42167 * 15 13 12 40 40 H 1.08002 * 125.98905 * 179.97438 * 20 19 18 41 41 H 1.07996 * 126.59486 * 180.02562 * 21 20 19 42 42 H 0.97002 * 126.39309 * 359.97438 * 22 18 16 43 43 H 1.08997 * 113.61908 * 270.81085 * 23 16 15 44 44 H 1.09010 * 113.68895 * 139.92215 * 23 16 15 45 45 H 1.08000 * 119.97655 * 180.02562 * 28 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.7262 -0.0375 -2.1396 6 6 3.1836 -0.6850 -3.2712 7 6 2.8535 -2.0146 -3.4892 8 8 3.3065 -2.6552 -4.5988 9 6 4.1234 -1.9001 -5.4958 10 6 4.5288 -2.7691 -6.6584 11 8 4.1546 -3.9214 -6.7136 12 7 5.3063 -2.2655 -7.6373 13 6 5.6999 -3.1102 -8.7677 14 1 5.7005 -4.1722 -8.5225 15 6 4.9556 -2.7795 -10.0722 16 6 6.2956 -2.9986 -10.7979 17 1 6.4584 -4.0305 -11.1090 18 6 6.5572 -2.0064 -11.9016 19 7 7.4892 -2.1068 -12.8095 20 6 7.4273 -1.0447 -13.6263 21 6 6.4191 -0.2559 -13.2084 22 7 5.8623 -0.8690 -12.1185 23 6 6.9841 -2.6393 -9.4706 24 6 2.0553 -2.6876 -2.5753 25 7 1.6966 -4.1046 -2.8077 26 8 0.9963 -4.6951 -2.0049 27 8 2.1018 -4.6802 -3.8017 28 6 1.5962 -2.0343 -1.4484 29 1 -0.3933 0.4418 -0.7651 30 1 1.7924 -0.5139 0.8900 31 1 1.5616 2.4678 1.2085 32 1 3.5347 1.7703 -0.0321 33 1 2.9859 0.9966 -1.9676 34 1 3.8008 -0.1576 -3.9834 35 1 3.5621 -1.0408 -5.8625 36 1 5.0151 -1.5552 -4.9723 37 1 5.6053 -1.3438 -7.5933 38 1 4.1908 -3.5101 -10.3356 39 1 4.5955 -1.7519 -10.1211 40 1 8.0735 -0.8550 -14.4706 41 1 6.1059 0.6778 -13.6516 42 1 5.1110 -0.5453 -11.5973 43 1 7.1797 -1.5734 -9.3547 44 1 7.8549 -3.2561 -9.2480 45 1 0.9753 -2.5578 -0.7365 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14772358_4549638.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:34:43 Heat of formation + Delta-G solvation = 19.887617 kcal Electronic energy + Delta-G solvation = -32923.371826 eV Core-core repulsion = 28106.812916 eV Total energy + Delta-G solvation = -4816.558910 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.135 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -43.29080 -43.08245 -41.78641 -40.99372 -39.77092 -38.94817 -37.59254 -37.35861 -34.80504 -33.47716 -33.43886 -32.24370 -30.86159 -29.68057 -27.82305 -26.81418 -26.67722 -25.87975 -24.07883 -22.89287 -22.60480 -21.98338 -21.53541 -20.76635 -20.52446 -19.77134 -19.20763 -18.95656 -18.63577 -18.40520 -18.09591 -17.57252 -17.29606 -16.87892 -16.52441 -16.31000 -16.09859 -15.76527 -15.69090 -15.60405 -15.24605 -14.90752 -14.73712 -14.62252 -14.12836 -14.00088 -13.90163 -13.75160 -13.53271 -13.41761 -13.22667 -12.70432 -12.51345 -12.35584 -12.27301 -12.24995 -12.19253 -12.01892 -11.94537 -11.71456 -11.02557 -11.00756 -10.97785 -10.83526 -10.56639 -10.16740 -9.78372 -9.33442 -5.00082 -1.31276 -0.24042 0.15860 0.35763 1.10171 1.21686 1.27342 1.45251 1.63895 2.02490 2.05636 2.13691 2.18808 2.36244 3.12119 3.22323 3.30728 3.38383 3.41078 3.51450 3.59809 3.63798 3.71447 3.78015 3.80372 3.93922 3.99071 4.03949 4.27412 4.29295 4.35716 4.50955 4.51622 4.57855 4.60311 4.63479 4.67010 4.79851 4.84332 4.87172 4.99153 5.07423 5.07913 5.18686 5.19439 5.46336 5.76799 5.80346 6.41792 6.45493 6.51564 6.73366 7.16028 7.16265 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.083 4.083 3 Si 0.801 3.199 4 C -0.150 4.150 5 C -0.005 4.005 6 C -0.187 4.187 7 C 0.194 3.806 8 O -0.292 6.292 9 C 0.023 3.977 10 C 0.509 3.491 11 O -0.564 6.564 12 N -0.696 5.696 13 C 0.127 3.873 14 H 0.100 0.900 15 C -0.139 4.139 16 C -0.027 4.027 17 H 0.113 0.887 18 C 0.213 3.787 19 N -0.535 5.535 20 C -0.066 4.066 21 C -0.040 4.040 22 N -0.554 5.554 23 C -0.117 4.117 24 C -0.104 4.104 25 N 0.034 4.966 26 O -0.207 6.207 27 O -0.170 6.170 28 C -0.004 4.004 29 H 0.398 0.602 30 H 0.109 0.891 31 H -0.307 1.307 32 H -0.263 1.263 33 H 0.189 0.811 34 H 0.208 0.792 35 H 0.148 0.852 36 H 0.143 0.857 37 H 0.423 0.577 38 H 0.076 0.924 39 H 0.105 0.895 40 H 0.175 0.825 41 H 0.211 0.789 42 H 0.432 0.568 43 H 0.106 0.894 44 H 0.084 0.916 45 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.280 17.482 -1.864 17.728 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.191 4.191 3 Si 0.704 3.296 4 C -0.152 4.152 5 C -0.023 4.023 6 C -0.206 4.206 7 C 0.144 3.856 8 O -0.202 6.202 9 C -0.054 4.054 10 C 0.295 3.705 11 O -0.441 6.441 12 N -0.350 5.350 13 C 0.022 3.978 14 H 0.118 0.882 15 C -0.178 4.178 16 C -0.047 4.047 17 H 0.131 0.869 18 C -0.052 4.052 19 N -0.255 5.255 20 C -0.212 4.212 21 C -0.174 4.174 22 N -0.159 5.159 23 C -0.156 4.156 24 C -0.190 4.190 25 N 0.544 4.456 26 O -0.413 6.413 27 O -0.385 6.385 28 C -0.023 4.023 29 H 0.248 0.752 30 H 0.126 0.874 31 H -0.235 1.235 32 H -0.189 1.189 33 H 0.206 0.794 34 H 0.225 0.775 35 H 0.166 0.834 36 H 0.160 0.840 37 H 0.262 0.738 38 H 0.094 0.906 39 H 0.123 0.877 40 H 0.192 0.808 41 H 0.228 0.772 42 H 0.274 0.726 43 H 0.124 0.876 44 H 0.103 0.897 45 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 3.282 16.703 -1.001 17.052 hybrid contribution -0.912 -0.681 0.318 1.182 sum 2.371 16.021 -0.683 16.210 Atomic orbital electron populations 1.86533 1.17262 1.82218 1.50635 1.25488 0.85478 1.12104 0.96044 0.93818 0.77909 0.72438 0.85409 1.20453 1.02118 0.92672 0.99936 1.21726 0.89437 1.01203 0.89885 1.21820 1.06080 0.90389 1.02282 1.18958 0.89587 0.92060 0.84957 1.86473 1.63612 1.39816 1.30297 1.23158 0.98155 0.94615 0.89439 1.20551 0.78520 0.87640 0.83807 1.90863 1.54818 1.20242 1.78173 1.45569 1.51374 1.16488 1.21613 1.22336 0.95179 0.96403 0.83895 0.88234 1.23572 0.96040 1.03701 0.94508 1.20794 0.98117 0.96832 0.89000 0.86851 1.23074 0.92673 0.90174 0.99253 1.70177 1.22994 1.25839 1.06474 1.22742 1.02298 0.93339 1.02867 1.23275 0.99132 1.02484 0.92549 1.43212 1.28502 1.18771 1.25409 1.23346 0.96970 1.03479 0.91792 1.20865 1.13450 0.81469 1.03196 1.43916 0.98224 1.04028 0.99452 1.94510 1.36215 1.68391 1.42202 1.94673 1.56186 1.69368 1.18288 1.20829 0.94216 0.94806 0.92495 0.75185 0.87388 1.23540 1.18946 0.79441 0.77512 0.83414 0.83978 0.73782 0.90569 0.87694 0.80764 0.77245 0.72641 0.87610 0.89715 0.83394 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 2.32 12.77 -148.98 -1.90 0.42 16 2 C -0.08 0.57 2.82 71.24 0.20 0.77 16 3 Si 0.80 -8.86 29.78 68.60 2.04 -6.82 16 4 C -0.15 1.00 5.39 -19.85 -0.11 0.89 16 5 C -0.01 0.07 8.66 22.25 0.19 0.26 16 6 C -0.19 2.37 9.04 22.37 0.20 2.58 16 7 C 0.19 -0.22 6.67 22.51 0.15 -0.07 16 8 O -0.29 -0.71 7.68 -63.37 -0.49 -1.19 16 9 C 0.02 -0.23 5.22 71.24 0.37 0.14 16 10 C 0.51 -1.03 7.91 87.66 0.69 -0.34 16 11 O -0.56 -6.88 16.12 16.00 0.26 -6.62 16 12 N -0.70 6.85 5.36 -440.03 -2.36 4.49 16 13 C 0.13 -0.75 4.21 45.52 0.19 -0.56 16 14 H 0.10 0.01 7.50 -2.39 -0.02 -0.01 16 15 C -0.14 1.01 7.37 31.18 0.23 1.24 16 16 C -0.03 0.10 4.29 -10.96 -0.05 0.06 16 17 H 0.11 -0.17 8.14 -2.39 -0.02 -0.19 16 18 C 0.21 0.10 7.37 138.13 1.02 1.12 16 19 N -0.53 -4.04 11.25 -188.14 -2.12 -6.15 16 20 C -0.07 -0.21 11.87 83.52 0.99 0.78 16 21 C -0.04 0.15 12.04 83.09 1.00 1.15 16 22 N -0.55 3.01 5.94 -186.28 -1.11 1.91 16 23 C -0.12 0.88 7.38 31.12 0.23 1.11 16 24 C -0.10 -0.62 6.86 36.47 0.25 -0.37 16 25 N 0.03 0.54 4.45 -46.25 -0.21 0.34 16 26 O -0.21 -3.79 18.45 18.88 0.35 -3.44 16 27 O -0.17 -3.52 17.24 25.61 0.44 -3.08 16 28 C 0.00 0.00 9.11 22.25 0.20 0.20 16 29 H 0.40 -5.16 8.70 -74.06 -0.64 -5.81 16 30 H 0.11 -0.51 7.96 -2.39 -0.02 -0.53 16 31 H -0.31 0.31 7.11 99.48 0.71 1.02 16 32 H -0.26 2.40 7.11 99.48 0.71 3.11 16 33 H 0.19 -3.91 4.87 -2.91 -0.01 -3.93 16 34 H 0.21 -4.80 6.30 -2.91 -0.02 -4.82 16 35 H 0.15 -2.89 7.65 -2.39 -0.02 -2.91 16 36 H 0.14 -2.61 7.67 -2.39 -0.02 -2.63 16 37 H 0.42 -7.88 8.71 -92.71 -0.81 -8.69 16 38 H 0.08 -0.32 8.14 -2.38 -0.02 -0.34 16 39 H 0.10 -1.30 6.66 -2.39 -0.02 -1.31 16 40 H 0.18 0.05 8.06 -2.91 -0.02 0.03 16 41 H 0.21 -2.32 8.06 -2.91 -0.02 -2.35 16 42 H 0.43 -5.39 7.54 -92.71 -0.70 -6.09 16 43 H 0.11 -1.15 8.06 -2.39 -0.02 -1.17 16 44 H 0.08 -0.50 8.14 -2.38 -0.02 -0.52 16 45 H 0.15 0.52 7.61 -2.91 -0.02 0.50 16 Total: 0.00 -47.51 389.26 -0.32 -47.83 By element: Atomic # 1 Polarization: -35.63 SS G_CDS: -1.01 Total: -36.64 kcal Atomic # 6 Polarization: 3.18 SS G_CDS: 5.77 Total: 8.95 kcal Atomic # 7 Polarization: 6.37 SS G_CDS: -5.79 Total: 0.58 kcal Atomic # 8 Polarization: -12.57 SS G_CDS: -1.34 Total: -13.91 kcal Atomic # 14 Polarization: -8.86 SS G_CDS: 2.04 Total: -6.82 kcal Total: -47.51 -0.32 -47.83 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_4549638.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 67.718 kcal (2) G-P(sol) polarization free energy of solvation -47.508 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.210 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.322 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -47.831 kcal (6) G-S(sol) free energy of system = (1) + (5) 19.888 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds