Wall clock time and date at job start Sun Mar 7 2021 04:34:59
AMSOL-version 7.1
by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers,
I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget,
B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar
Copyright 2004 by Regents of the University of Minnesota.
All rights reserved.
Notice: recipients of this code are asked to comply
with the user agreement in Section 1 of the documentation file.
*******************************************************************************
* 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION
* - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT)
* GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK
* TLIMIT= - A TIME OF 15. SECONDS REQUESTED
* CHARGE - CHARGE ON SYSTEM= 0
* AM1 - THE AM1 HAMILTONIAN TO BE USED
* DEV - DEVELOPER OPTIONS ARE ALLOWED
* SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED
* - CHARGE MODEL 2 WILL BE USED (CM2A)
* - THE SOLVENT IS USER-SPECIFIED
* DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06
* IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345
* ALPHA - THE SOLVENT ALPHA IS 0.00
* BETA - THE SOLVENT BETA IS 0.00
* GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS
* 38.93 CAL MOL^-1 ANGSTROM^-2
* FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00
* FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00
*******************************************************************************
Atom NO. Chemical Bond length Bond angle Dihedral angle
number (k) symbol (angstroms) (degrees) (degrees)
(I) NA:I NB:NA:I NC:NB:NA:I NA NB NC
1 1 C
2 2 O 1.42899 * 1
3 3 C 1.35981 * 117.00055 * 2 1
4 4 C 1.38674 * 119.99911 * 180.02562 * 3 2 1
5 5 C 1.38157 * 119.99810 * 179.97438 * 4 3 2
6 6 C 1.50706 * 119.99710 * 179.97438 * 5 4 3
7 7 O 1.42903 * 109.47189 * 255.00111 * 6 5 4
8 8 Si 1.86299 * 109.47210 * 15.00366 * 6 5 4
9 9 C 1.38673 * 120.00340 * 0.02562 * 5 4 3
10 10 O 1.35981 * 120.00239 * 179.97438 * 9 5 4
11 11 C 1.42901 * 116.99691 * 179.97438 * 10 9 5
12 12 C 1.50703 * 109.46572 * 179.97438 * 11 10 9
13 13 O 1.21282 * 120.00093 * 359.97438 * 12 11 10
14 14 N 1.34781 * 119.99613 * 180.02562 * 12 11 10
15 15 C 1.46494 * 119.99714 * 180.02562 * 14 12 11
16 16 H 1.08995 * 112.85566 * 25.32410 * 15 14 12
17 17 C 1.53784 * 113.61839 * 156.52508 * 15 14 12
18 18 C 1.53781 * 87.08164 * 139.97433 * 17 15 14
19 19 H 1.09000 * 113.61024 * 89.20917 * 18 17 15
20 20 C 1.50698 * 113.61363 * 220.01825 * 18 17 15
21 21 N 1.30499 * 125.65172 * 265.02888 * 20 18 17
22 22 C 1.34127 * 109.25818 * 180.02562 * 21 20 18
23 23 C 1.34662 * 108.01885 * 359.97438 * 22 21 20
24 24 N 1.35043 * 125.64996 * 84.72242 * 20 18 17
25 25 C 1.53784 * 113.61446 * 254.13134 * 15 14 12
26 26 C 1.38728 * 119.99621 * 359.71661 * 9 5 4
27 27 C 1.38108 * 119.99946 * 0.53703 * 26 9 5
28 28 H 1.08996 * 109.47480 * 179.97438 * 1 2 3
29 29 H 1.09000 * 109.47367 * 299.99890 * 1 2 3
30 30 H 1.08997 * 109.47388 * 59.99809 * 1 2 3
31 31 H 1.07997 * 120.00328 * 359.97438 * 4 3 2
32 32 H 1.08998 * 109.46637 * 135.00466 * 6 5 4
33 33 H 0.96696 * 113.99941 * 179.97438 * 7 6 5
34 34 H 1.48493 * 110.00033 * 178.67938 * 8 6 5
35 35 H 1.48495 * 109.99992 * 299.99890 * 8 6 5
36 36 H 1.08991 * 109.47011 * 299.99386 * 11 10 9
37 37 H 1.08999 * 109.47213 * 59.99613 * 11 10 9
38 38 H 0.96993 * 120.00048 * 359.97438 * 14 12 11
39 39 H 1.08994 * 113.61459 * 254.53411 * 17 15 14
40 40 H 1.09002 * 113.60705 * 25.34300 * 17 15 14
41 41 H 1.07998 * 125.98934 * 179.97438 * 22 21 20
42 42 H 1.08004 * 126.59261 * 180.02562 * 23 22 21
43 43 H 0.96993 * 126.39602 * 0.02562 * 24 20 18
44 44 H 1.09007 * 113.61193 * 334.56718 * 25 15 14
45 45 H 1.09002 * 113.61918 * 105.46702 * 25 15 14
46 46 H 1.07998 * 119.99677 * 180.30068 * 26 9 5
47 47 H 1.08002 * 120.00212 * 179.77140 * 27 26 9
Note: An asterisk (*) indicates this parameter was or will be optimized.
Cartesian coordinates (angstroms)
NO. Atom X Y Z
1 6 0.0000 0.0000 0.0000
2 8 1.4290 0.0000 0.0000
3 6 2.0463 1.2116 0.0000
4 6 3.4312 1.2841 -0.0005
5 6 4.0584 2.5151 -0.0011
6 6 5.5634 2.5939 -0.0011
7 8 6.0208 2.9676 1.3002
8 14 6.2723 0.9320 -0.4550
9 6 3.3032 3.6782 -0.0005
10 8 3.9205 4.8898 -0.0005
11 6 3.0805 6.0458 -0.0005
12 6 3.9348 7.2873 0.0001
13 8 5.1438 7.1915 0.0010
14 7 3.3552 8.5041 0.0007
15 6 4.1856 9.7110 0.0008
16 1 5.1733 9.5453 -0.4293
17 6 3.4699 10.9514 -0.5598
18 6 4.1495 11.7536 0.5624
19 1 5.1272 12.1484 0.2863
20 6 3.2549 12.7919 1.1890
21 7 3.2012 14.0520 0.8537
22 6 2.2958 14.6760 1.6217
23 6 1.7680 13.7680 2.4647
24 7 2.3719 12.5715 2.1867
25 6 4.2179 10.4365 1.3564
26 6 1.9178 3.6056 -0.0054
27 6 1.2908 2.3750 0.0004
28 1 -0.3634 -1.0276 -0.0005
29 1 -0.3634 0.5138 0.8900
30 1 -0.3634 0.5138 -0.8899
31 1 4.0194 0.3784 -0.0005
32 1 5.8882 3.3384 -0.7280
33 1 6.9824 3.0374 1.3740
34 1 7.7550 1.0046 -0.4897
35 1 5.8368 -0.0918 0.5285
36 1 2.4514 6.0378 -0.8905
37 1 2.4512 6.0377 0.8894
38 1 2.3883 8.5807 0.0004
39 1 3.8011 11.2320 -1.5595
40 1 2.3844 10.9066 -0.4706
41 1 2.0357 15.7230 1.5727
42 1 1.0104 13.9482 3.2130
43 1 2.2000 11.7241 2.6263
44 1 3.3374 10.2514 1.9718
45 1 5.1523 10.3021 1.9014
46 1 1.3297 4.5113 -0.0099
47 1 0.2123 2.3185 0.0004
There are 66 doubly filled levels
RHF calculation, no. of doubly occupied orbitals= 66
No. of singly occupied orbitals= 1
REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN:
H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987).
REFERENCE FOR CHARGE MODEL 2:
J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885.
REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL:
J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and
D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63
P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted.
CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R
& SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93
& DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV
s_22_14772358_4974302.mol2 47
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
SCF FIELD WAS ACHIEVED
Wall clock time and date at job start Sun Mar 7 2021 04:34:59
Heat of formation + Delta-G solvation = -9.637705 kcal
Electronic energy + Delta-G solvation = -31117.820647 eV
Core-core repulsion = 26656.778048 eV
Total energy + Delta-G solvation = -4461.042599 eV
No. of doubly occupied orbitals = 66
and no. of open levels = 1
Molecular weight
(most abundant/longest-lived isotopes) = 360.156 amu
Computer time = 1.03 seconds
Orbital eigenvalues (eV)
-43.13813 -41.76532 -41.12453 -40.06632 -39.17522 -37.99473 -36.94564 -34.83144
-33.46140 -32.89360 -31.25478 -30.63966 -29.41200 -28.06377 -27.02822 -26.52324
-26.04472 -23.72110 -22.68598 -22.29245 -21.93652 -21.58352 -20.85579 -19.44602
-19.10754 -18.64563 -18.40576 -18.38064 -17.55427 -17.40707 -17.12996 -16.66988
-16.59399 -16.03942 -15.83355 -15.66183 -15.52052 -15.46327 -15.19305 -14.93903
-14.75174 -14.55199 -14.16900 -14.08862 -13.82720 -13.76918 -13.70332 -13.57174
-13.44408 -13.14931 -12.67084 -12.60313 -12.54845 -12.18365 -11.87420 -11.77512
-11.63384 -11.45693 -11.00413 -10.99180 -10.91708 -10.29389 -10.27827 -10.07388
-9.37893 -8.75449 -4.87570 0.09670 0.42115 1.03092 1.36905 1.40256
1.41412 1.67870 2.02373 2.06223 2.15714 2.27390 2.53119 2.57633
3.12232 3.23570 3.40052 3.42088 3.48203 3.59969 3.67133 3.72354
3.82036 3.82493 3.87592 4.03629 4.07373 4.11812 4.18779 4.21356
4.32184 4.37779 4.43531 4.45163 4.46779 4.48765 4.55317 4.63871
4.68797 4.71234 4.77980 4.96002 5.06358 5.12169 5.15747 5.23307
5.28680 5.46090 5.77113 6.12205 6.27455 6.32409 6.43199 6.61965
7.01755 7.12409
Net atomic charges, atomic populations, and dipole contributions
calculated with CM2
Atom NO. Type Charge No. of electrons
1 C 0.027 3.973
2 O -0.315 6.315
3 C 0.100 3.900
4 C -0.110 4.110
5 C -0.059 4.059
6 C -0.065 4.065
7 O -0.529 6.529
8 Si 0.684 3.316
9 C 0.116 3.884
10 O -0.278 6.278
11 C 0.039 3.961
12 C 0.518 3.482
13 O -0.507 6.507
14 N -0.719 5.719
15 C 0.129 3.871
16 H 0.125 0.875
17 C -0.132 4.132
18 C -0.022 4.022
19 H 0.126 0.874
20 C 0.219 3.781
21 N -0.485 5.485
22 C -0.026 4.026
23 C -0.056 4.056
24 N -0.566 5.566
25 C -0.151 4.151
26 C -0.171 4.171
27 C -0.161 4.161
28 H 0.102 0.898
29 H 0.055 0.945
30 H 0.056 0.944
31 H 0.144 0.856
32 H 0.081 0.919
33 H 0.379 0.621
34 H -0.259 1.259
35 H -0.254 1.254
36 H 0.094 0.906
37 H 0.092 0.908
38 H 0.402 0.598
39 H 0.090 0.910
40 H 0.088 0.912
41 H 0.172 0.828
42 H 0.178 0.822
43 H 0.417 0.583
44 H 0.080 0.920
45 H 0.087 0.913
46 H 0.133 0.867
47 H 0.135 0.865
For the charges calculated by CM2:
Dipole moment (debyes) X Y Z Total
from point charges -6.998 -0.541 -0.971 7.086
Note: The Mulliken population analysis charges presented below were not
used in the solvation calculation but are provided for completeness.
The chosen solvation model uses CM2 partial charges for calculating
solvation energies.
Net atomic charges, atomic populations, and dipole contributions
using Mulliken population analysis
Atom NO. Type Charge No. of electrons
1 C -0.068 4.068
2 O -0.229 6.229
3 C 0.055 3.945
4 C -0.128 4.128
5 C -0.060 4.060
6 C -0.175 4.175
7 O -0.336 6.336
8 Si 0.585 3.415
9 C 0.071 3.929
10 O -0.191 6.191
11 C -0.040 4.040
12 C 0.303 3.697
13 O -0.380 6.380
14 N -0.373 5.373
15 C 0.024 3.976
16 H 0.143 0.857
17 C -0.171 4.171
18 C -0.042 4.042
19 H 0.144 0.856
20 C -0.045 4.045
21 N -0.204 5.204
22 C -0.174 4.174
23 C -0.190 4.190
24 N -0.170 5.170
25 C -0.190 4.190
26 C -0.190 4.190
27 C -0.180 4.180
28 H 0.120 0.880
29 H 0.073 0.927
30 H 0.075 0.925
31 H 0.162 0.838
32 H 0.099 0.901
33 H 0.227 0.773
34 H -0.185 1.185
35 H -0.178 1.178
36 H 0.112 0.888
37 H 0.110 0.890
38 H 0.237 0.763
39 H 0.108 0.892
40 H 0.106 0.894
41 H 0.189 0.811
42 H 0.195 0.805
43 H 0.255 0.745
44 H 0.099 0.901
45 H 0.106 0.894
46 H 0.151 0.849
47 H 0.153 0.847
Dipole moment (debyes) X Y Z Total
from point charges -5.472 -1.015 -1.232 5.700
hybrid contribution -1.225 0.376 1.849 2.250
sum -6.697 -0.640 0.617 6.756
Atomic orbital electron populations
1.23089 0.78120 1.04321 1.01318 1.86106 1.21493 1.26266 1.89015
1.18732 0.91809 0.84530 0.99472 1.20185 0.91955 0.97226 1.03415
1.18303 0.93792 0.89861 1.04068 1.24609 0.93651 1.10742 0.88473
1.86589 1.26968 1.90736 1.29341 0.95115 0.80238 0.76370 0.89786
1.18607 0.90520 0.84797 0.98987 1.86220 1.33250 1.10784 1.88818
1.22450 0.93248 0.84503 1.03834 1.20084 0.88896 0.84200 0.76551
1.90788 1.14138 1.86462 1.46603 1.45788 1.10229 1.04916 1.76350
1.22491 0.96743 0.81993 0.96333 0.85737 1.23422 1.00595 0.93452
0.99614 1.20786 0.98067 0.89452 0.95929 0.85573 1.22853 0.95826
0.93717 0.92089 1.70253 1.20314 1.03542 1.26320 1.22429 0.98190
1.00326 0.96456 1.22823 1.04703 0.85447 1.06009 1.43264 1.32235
1.11206 1.30283 1.23617 1.03563 0.94186 0.97668 1.21015 0.92827
0.98662 1.06458 1.21078 1.00273 0.91507 1.05150 0.87954 0.92662
0.92511 0.83839 0.90149 0.77321 1.18456 1.17836 0.88849 0.89034
0.76328 0.89171 0.89364 0.81122 0.80471 0.74523 0.90120 0.89432
0.84924 0.84740
Number of geometries 1
Number of calculations of the screened coulomb radii 1
The total number of SCF iterations 12.
Note: The number of geometries may not
correspond to the number of cycles due to rejected geometry changes.
In the following table subtotal= G_P + SS G_CDS.
Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M
number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value
1 C 0.03 -0.05 9.81 101.05 0.99 0.94 16
2 O -0.32 -0.55 10.50 -19.68 -0.21 -0.76 16
3 C 0.10 0.20 6.69 -39.24 -0.26 -0.07 16
4 C -0.11 -0.27 8.59 -39.45 -0.34 -0.61 16
5 C -0.06 -0.18 5.30 -104.49 -0.55 -0.73 16
6 C -0.07 -0.16 2.36 36.01 0.09 -0.07 16
7 O -0.53 -2.00 12.86 -35.23 -0.45 -2.46 16
8 Si 0.68 0.47 30.20 -169.99 -5.13 -4.66 16
9 C 0.12 0.29 6.66 -39.24 -0.26 0.03 16
10 O -0.28 -0.83 9.00 -39.59 -0.36 -1.19 16
11 C 0.04 -0.05 5.22 36.01 0.19 0.14 16
12 C 0.52 0.30 7.91 -10.98 -0.09 0.21 16
13 O -0.51 -2.78 16.12 -14.36 -0.23 -3.01 16
14 N -0.72 2.05 5.36 -53.02 -0.28 1.77 16
15 C 0.13 -0.29 4.21 -67.12 -0.28 -0.58 16
16 H 0.12 -0.08 7.50 -51.93 -0.39 -0.47 16
17 C -0.13 0.38 7.38 -25.92 -0.19 0.19 16
18 C -0.02 0.04 4.29 -90.87 -0.39 -0.35 16
19 H 0.13 -0.18 8.14 -51.93 -0.42 -0.61 16
20 C 0.22 0.18 7.36 -155.42 -1.14 -0.97 16
21 N -0.49 -1.80 11.25 -10.82 -0.12 -1.93 16
22 C -0.03 -0.05 11.87 -17.81 -0.21 -0.26 16
23 C -0.06 0.03 12.04 -16.56 -0.20 -0.17 16
24 N -0.57 0.73 5.94 -10.23 -0.06 0.66 16
25 C -0.15 0.41 7.37 -25.83 -0.19 0.22 16
26 C -0.17 -0.02 9.03 -39.45 -0.36 -0.38 16
27 C -0.16 -0.04 9.03 -39.45 -0.36 -0.39 16
28 H 0.10 -0.34 8.14 -51.93 -0.42 -0.77 16
29 H 0.05 -0.15 7.66 -51.93 -0.40 -0.55 16
30 H 0.06 -0.18 7.66 -51.93 -0.40 -0.57 16
31 H 0.14 0.25 4.90 -52.49 -0.26 -0.01 16
32 H 0.08 0.16 7.82 -51.93 -0.41 -0.24 16
33 H 0.38 -0.01 8.74 45.56 0.40 0.39 16
34 H -0.26 -0.65 7.11 56.52 0.40 -0.25 16
35 H -0.25 -0.83 6.75 56.52 0.38 -0.45 16
36 H 0.09 -0.37 7.65 -51.93 -0.40 -0.77 16
37 H 0.09 -0.32 7.67 -51.93 -0.40 -0.72 16
38 H 0.40 -2.38 8.71 -40.82 -0.36 -2.74 16
39 H 0.09 -0.24 8.14 -51.93 -0.42 -0.67 16
40 H 0.09 -0.31 8.06 -51.93 -0.42 -0.73 16
41 H 0.17 -0.01 8.06 -52.49 -0.42 -0.43 16
42 H 0.18 -0.64 8.06 -52.48 -0.42 -1.06 16
43 H 0.42 -1.72 7.54 -40.82 -0.31 -2.03 16
44 H 0.08 -0.33 6.65 -51.92 -0.35 -0.67 16
45 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16
46 H 0.13 -0.39 6.29 -52.49 -0.33 -0.72 16
47 H 0.13 -0.30 6.29 -52.49 -0.33 -0.63 16
LS Contribution 392.03 15.07 5.91 5.91
Total: 0.00 -13.20 392.03 -10.59 -23.79
By element:
Atomic # 1 Polarization: -9.19 SS G_CDS: -6.09 Total: -15.28 kcal
Atomic # 6 Polarization: 0.71 SS G_CDS: -3.56 Total: -2.85 kcal
Atomic # 7 Polarization: 0.97 SS G_CDS: -0.47 Total: 0.51 kcal
Atomic # 8 Polarization: -6.17 SS G_CDS: -1.25 Total: -7.42 kcal
Atomic # 14 Polarization: 0.47 SS G_CDS: -5.13 Total: -4.66 kcal
Total LS contribution 5.91 Total: 5.91 kcal
Total: -13.20 -10.59 -23.79 kcal
The number of atoms in the molecule is 47
The average number of expansion shells was 16.00
The maximum number of expansion shells was 16
The minimum number of expansion shells was 16
**** NOTA BENE ****
This is the net solvation energy for this exact molecular structure
(nuclear and electronic)! The standard-state solvation energy should be
obtained as the difference between the heat of formation plus delta-G solvation
for the relaxed solvated system and that for the relaxed gas-phase system.
s_22_14772358_4974302.mol2 47
1SCF run
This is a breakdown of the solvation energy calculated
without geometric relaxation in solution:
(1) E-EN(sol) electronic-nuclear energy of solute 14.153 kcal
(2) G-P(sol) polarization free energy of solvation -13.202 kcal
(3) G-ENP(sol) elect.-nuc.-pol. free energy of system 0.951 kcal
(4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.588 kcal
(5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.791 kcal
(6) G-S(sol) free energy of system = (1) + (5) -9.638 kcal
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
Total computer time = 1.03 seconds