Wall clock time and date at job start Sun Mar 7 2021 04:35:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35965 * 117.00244 * 2 1 4 4 C 1.39440 * 120.12148 * 179.97438 * 3 2 1 5 5 O 1.34781 * 133.24350 * 0.02562 * 4 3 2 6 6 C 1.34940 * 110.83692 * 179.26447 * 5 4 3 7 7 C 1.46999 * 125.13509 * 180.12420 * 6 5 4 8 8 O 1.21644 * 119.99808 * 180.63997 * 7 6 5 9 9 N 1.34778 * 119.99987 * 0.64476 * 7 6 5 10 10 C 1.46496 * 119.99799 * 179.97438 * 9 7 6 11 11 H 1.08995 * 112.85126 * 334.66319 * 10 9 7 12 12 C 1.53780 * 113.61660 * 105.86310 * 10 9 7 13 13 C 1.53956 * 87.02010 * 139.94814 * 12 10 9 14 14 H 1.09002 * 113.53495 * 89.19480 * 13 12 10 15 15 C 1.50697 * 113.74424 * 220.05249 * 13 12 10 16 16 N 1.30494 * 125.65060 * 192.29024 * 15 13 12 17 17 C 1.34132 * 109.25662 * 179.89949 * 16 15 13 18 18 C 1.34670 * 108.02151 * 0.36602 * 17 16 15 19 19 N 1.35050 * 125.64772 * 12.60555 * 15 13 12 20 20 C 1.53782 * 87.11298 * 334.63639 * 13 12 10 21 21 C 1.35807 * 109.72160 * 0.68680 * 6 5 4 22 22 C 1.40610 * 119.14022 * 179.77689 * 4 3 2 23 23 C 1.39781 * 120.11643 * 0.52402 * 22 4 3 24 24 C 1.50699 * 120.09688 * 179.72165 * 23 22 4 25 25 O 1.42907 * 109.46603 * 74.73108 * 24 23 22 26 26 Si 1.86298 * 109.47032 * 194.72411 * 24 23 22 27 27 C 1.36638 * 119.80978 * 359.44856 * 23 22 4 28 28 C 1.38264 * 120.11913 * 0.02562 * 3 2 1 29 29 H 1.09002 * 109.47324 * 299.99563 * 1 2 3 30 30 H 1.09000 * 109.47218 * 59.99436 * 1 2 3 31 31 H 1.09003 * 109.47249 * 179.97438 * 1 2 3 32 32 H 0.97002 * 120.00011 * 359.97438 * 9 7 6 33 33 H 1.09000 * 113.61491 * 254.53244 * 12 10 9 34 34 H 1.09003 * 113.61171 * 25.42767 * 12 10 9 35 35 H 1.07999 * 125.99483 * 180.12034 * 17 16 15 36 36 H 1.08002 * 126.59210 * 179.81535 * 18 17 16 37 37 H 0.96998 * 126.40097 * 359.93689 * 19 15 13 38 38 H 1.08995 * 113.61621 * 270.81099 * 20 13 12 39 39 H 1.09001 * 113.68824 * 139.91800 * 20 13 12 40 40 H 1.07991 * 126.95538 * 179.42473 * 21 6 5 41 41 H 1.08996 * 109.47117 * 314.73021 * 24 23 22 42 42 H 0.96697 * 114.00527 * 59.99993 * 25 24 23 43 43 H 1.48506 * 109.99834 * 58.68765 * 26 24 23 44 44 H 1.48502 * 110.00011 * 180.02562 * 26 24 23 45 45 H 1.07997 * 119.75246 * 180.27524 * 27 23 22 46 46 H 1.08002 * 119.65917 * 359.95676 * 28 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4386 1.2873 0.0005 5 8 4.4141 0.3572 0.0007 6 6 5.6317 0.9386 -0.0149 7 6 6.9131 0.2183 -0.0219 8 8 7.9595 0.8386 -0.0244 9 7 6.9286 -1.1294 -0.0256 10 6 8.2056 -1.8472 -0.0331 11 1 9.0175 -1.2621 -0.4649 12 6 8.5598 -2.4885 1.3190 13 6 9.0751 -3.6987 0.5190 14 1 10.1257 -3.6203 0.2392 15 6 8.7331 -5.0278 1.1416 16 7 9.2359 -6.1814 0.7961 17 6 8.7044 -7.1436 1.5648 18 6 7.8335 -6.5652 2.4136 19 7 7.8512 -5.2230 2.1455 20 6 8.1068 -3.2743 -0.5978 21 6 5.4945 2.2897 -0.0106 22 6 4.0555 2.5509 -0.0043 23 6 3.2767 3.7116 0.0016 24 6 3.9383 5.0656 0.0028 25 8 4.4615 5.3411 -1.2982 26 14 2.6862 6.3681 0.4571 27 6 1.9137 3.6151 0.0005 28 6 1.2957 2.3726 0.0005 29 1 -0.3634 0.5138 0.8900 30 1 -0.3634 0.5139 -0.8899 31 1 -0.3634 -1.0277 -0.0005 32 1 6.0941 -1.6240 -0.0233 33 1 9.3418 -1.9580 1.8623 34 1 7.6904 -2.7119 1.9373 35 1 8.9318 -8.1979 1.5098 36 1 7.2362 -7.0644 3.1623 37 1 7.3282 -4.5397 2.5933 38 1 7.1134 -3.7129 -0.5044 39 1 8.5223 -3.3769 -1.6002 40 1 6.2874 3.0228 -0.0115 41 1 4.7502 5.0726 0.7300 42 1 3.7933 5.3507 -1.9971 43 1 2.1112 6.0753 1.7946 44 1 3.3261 7.7082 0.4612 45 1 1.3129 4.5125 0.0006 46 1 0.2174 2.3120 0.0002 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14772358_6672420.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:35:22 Heat of formation + Delta-G solvation = 26.970138 kcal Electronic energy + Delta-G solvation = -32484.596474 eV Core-core repulsion = 27924.226648 eV Total energy + Delta-G solvation = -4560.369826 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.141 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -43.71430 -43.09469 -41.20552 -40.62817 -39.29872 -39.11135 -37.04326 -34.86525 -33.60997 -33.41887 -31.97702 -31.16094 -30.47667 -28.77821 -27.00060 -26.76330 -26.23512 -24.63712 -23.99241 -22.64873 -22.11938 -21.73794 -21.58161 -20.91466 -19.72870 -19.15082 -18.96938 -18.59186 -17.81308 -17.71384 -17.27648 -16.98199 -16.72021 -16.58649 -16.24770 -15.89337 -15.85254 -15.71080 -15.68919 -14.93841 -14.87403 -14.66710 -14.62518 -14.41766 -14.13422 -14.08349 -13.75102 -13.63013 -13.59382 -13.49907 -13.38027 -12.64851 -12.59406 -12.42588 -12.16917 -12.12252 -11.93728 -11.85458 -11.42495 -10.98852 -10.96627 -10.94885 -10.49423 -10.32807 -9.82174 -9.34046 -9.03732 -5.11344 -0.64084 0.06958 0.65734 1.07282 1.18518 1.25472 1.58635 1.85544 1.92618 1.98280 1.99734 2.13268 2.19690 2.36025 3.10372 3.21239 3.27981 3.38481 3.44664 3.48651 3.58521 3.62793 3.78039 3.81946 3.83283 3.97146 4.03997 4.04444 4.11376 4.13291 4.37206 4.39852 4.40869 4.41765 4.45932 4.48163 4.51421 4.66770 4.73251 4.78081 4.81080 4.83597 4.96511 5.01895 5.15177 5.17904 5.22920 5.31013 5.58158 5.80893 6.09761 6.26094 6.36397 6.53224 6.86103 7.16069 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.311 6.311 3 C 0.150 3.850 4 C 0.046 3.954 5 O -0.175 6.175 6 C -0.026 4.026 7 C 0.604 3.396 8 O -0.506 6.506 9 N -0.708 5.708 10 C 0.125 3.875 11 H 0.128 0.872 12 C -0.150 4.150 13 C -0.021 4.021 14 H 0.127 0.873 15 C 0.219 3.781 16 N -0.485 5.485 17 C -0.026 4.026 18 C -0.056 4.056 19 N -0.566 5.566 20 C -0.132 4.132 21 C -0.102 4.102 22 C -0.082 4.082 23 C -0.098 4.098 24 C -0.066 4.066 25 O -0.535 6.535 26 Si 0.686 3.314 27 C -0.087 4.087 28 C -0.177 4.177 29 H 0.060 0.940 30 H 0.062 0.938 31 H 0.105 0.895 32 H 0.409 0.591 33 H 0.089 0.911 34 H 0.081 0.919 35 H 0.171 0.829 36 H 0.178 0.822 37 H 0.417 0.583 38 H 0.089 0.911 39 H 0.091 0.909 40 H 0.174 0.826 41 H 0.114 0.886 42 H 0.379 0.621 43 H -0.255 1.255 44 H -0.252 1.252 45 H 0.141 0.859 46 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.509 0.257 0.538 8.530 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.224 6.224 3 C 0.104 3.896 4 C -0.002 4.002 5 O -0.076 6.076 6 C -0.076 4.076 7 C 0.390 3.610 8 O -0.382 6.382 9 N -0.358 5.358 10 C 0.020 3.980 11 H 0.146 0.854 12 C -0.190 4.190 13 C -0.042 4.042 14 H 0.145 0.855 15 C -0.045 4.045 16 N -0.204 5.204 17 C -0.174 4.174 18 C -0.190 4.190 19 N -0.170 5.170 20 C -0.171 4.171 21 C -0.123 4.123 22 C -0.084 4.084 23 C -0.099 4.099 24 C -0.177 4.177 25 O -0.341 6.341 26 Si 0.587 3.413 27 C -0.105 4.105 28 C -0.196 4.196 29 H 0.079 0.921 30 H 0.080 0.920 31 H 0.123 0.877 32 H 0.244 0.756 33 H 0.107 0.893 34 H 0.100 0.900 35 H 0.189 0.811 36 H 0.195 0.805 37 H 0.255 0.745 38 H 0.107 0.893 39 H 0.110 0.890 40 H 0.192 0.808 41 H 0.131 0.869 42 H 0.226 0.774 43 H -0.180 1.180 44 H -0.176 1.176 45 H 0.158 0.842 46 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -6.769 0.671 0.814 6.851 hybrid contribution -1.215 -0.317 1.224 1.754 sum -7.984 0.355 2.039 8.248 Atomic orbital electron populations 1.23195 0.77265 1.04778 1.01836 1.86170 1.22200 1.25681 1.88391 1.17733 0.86481 0.85903 0.99508 1.18781 0.87460 0.86959 1.07034 1.84048 1.12665 1.34733 1.76181 1.21967 0.83903 0.92602 1.09151 1.16651 0.85431 0.82207 0.76742 1.90926 1.30306 1.67422 1.49585 1.45877 1.10053 1.05658 1.74235 1.22600 0.86856 0.91848 0.96668 0.85426 1.23618 1.01835 0.96012 0.97527 1.20782 1.01638 0.85835 0.95920 0.85494 1.22836 0.93673 0.96153 0.91816 1.70248 1.25989 0.97817 1.26357 1.22426 0.99014 0.99568 0.96424 1.22824 1.06838 0.83231 1.06066 1.43273 1.34788 1.08899 1.30000 1.23427 1.00270 0.93672 0.99718 1.22762 0.94801 0.94347 1.00384 1.19409 0.92636 0.92081 1.04240 1.19503 0.92922 0.94476 1.02999 1.25065 1.05477 0.97748 0.89376 1.86545 1.38153 1.93340 1.16018 0.94986 0.83023 0.77848 0.85448 1.20399 0.93095 0.97281 0.99739 1.20987 1.00449 0.90515 1.07673 0.92099 0.91987 0.87653 0.75566 0.89267 0.90033 0.81127 0.80482 0.74489 0.89267 0.89021 0.80810 0.86868 0.77395 1.17955 1.17648 0.84161 0.83345 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.81 101.05 0.99 0.91 16 2 O -0.31 -0.26 10.50 -19.63 -0.21 -0.47 16 3 C 0.15 0.16 6.70 -39.12 -0.26 -0.10 16 4 C 0.05 0.12 7.35 -38.24 -0.28 -0.16 16 5 O -0.17 -0.47 10.28 2.61 0.03 -0.45 16 6 C -0.03 -0.07 7.07 -36.90 -0.26 -0.33 16 7 C 0.60 1.46 7.80 -12.71 -0.10 1.36 16 8 O -0.51 -2.65 16.44 5.24 0.09 -2.57 16 9 N -0.71 0.35 5.36 -54.23 -0.29 0.06 16 10 C 0.12 -0.17 4.21 -67.12 -0.28 -0.45 16 11 H 0.13 -0.06 7.50 -51.93 -0.39 -0.45 16 12 C -0.15 0.31 7.37 -25.83 -0.19 0.12 16 13 C -0.02 0.02 4.29 -90.87 -0.39 -0.37 16 14 H 0.13 -0.15 8.14 -51.93 -0.42 -0.57 16 15 C 0.22 0.31 7.37 -155.42 -1.14 -0.83 16 16 N -0.48 -2.05 11.25 -10.82 -0.12 -2.17 16 17 C -0.03 -0.06 11.87 -17.81 -0.21 -0.27 16 18 C -0.06 0.00 12.04 -16.56 -0.20 -0.20 16 19 N -0.57 0.30 5.94 -10.23 -0.06 0.24 16 20 C -0.13 0.25 7.38 -25.91 -0.19 0.06 16 21 C -0.10 -0.27 10.68 -37.24 -0.40 -0.67 16 22 C -0.08 -0.18 6.16 -105.21 -0.65 -0.83 16 23 C -0.10 -0.03 5.26 -104.62 -0.55 -0.58 16 24 C -0.07 0.02 2.71 36.01 0.10 0.12 16 25 O -0.54 -0.11 12.88 -35.23 -0.45 -0.56 16 26 Si 0.69 -1.16 29.92 -169.99 -5.09 -6.25 16 27 C -0.09 0.14 8.62 -39.96 -0.34 -0.20 16 28 C -0.18 0.24 9.03 -39.38 -0.36 -0.11 16 29 H 0.06 -0.27 7.66 -51.93 -0.40 -0.67 16 30 H 0.06 -0.28 7.66 -51.93 -0.40 -0.68 16 31 H 0.11 -0.47 8.14 -51.93 -0.42 -0.90 16 32 H 0.41 -0.80 8.43 -40.82 -0.34 -1.15 16 33 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 34 H 0.08 -0.25 6.66 -51.93 -0.35 -0.59 16 35 H 0.17 0.06 8.06 -52.49 -0.42 -0.36 16 36 H 0.18 -0.53 8.06 -52.49 -0.42 -0.96 16 37 H 0.42 -1.34 7.55 -40.82 -0.31 -1.65 16 38 H 0.09 -0.18 8.06 -51.93 -0.42 -0.60 16 39 H 0.09 -0.17 8.14 -51.93 -0.42 -0.60 16 40 H 0.17 0.37 8.06 -52.49 -0.42 -0.05 16 41 H 0.11 0.05 7.96 -51.93 -0.41 -0.37 16 42 H 0.38 -1.45 8.70 45.56 0.40 -1.06 16 43 H -0.25 -0.17 7.11 56.52 0.40 0.23 16 44 H -0.25 -0.43 7.11 56.52 0.40 -0.03 16 45 H 0.14 -0.64 5.07 -52.49 -0.27 -0.91 16 46 H 0.15 -0.63 6.26 -52.49 -0.33 -0.96 16 LS Contribution 390.75 15.07 5.89 5.89 Total: 0.00 -11.37 390.75 -10.31 -21.68 By element: Atomic # 1 Polarization: -7.50 SS G_CDS: -5.37 Total: -12.87 kcal Atomic # 6 Polarization: 2.18 SS G_CDS: -4.72 Total: -2.53 kcal Atomic # 7 Polarization: -1.39 SS G_CDS: -0.47 Total: -1.87 kcal Atomic # 8 Polarization: -3.49 SS G_CDS: -0.55 Total: -4.04 kcal Atomic # 14 Polarization: -1.16 SS G_CDS: -5.09 Total: -6.25 kcal Total LS contribution 5.89 Total: 5.89 kcal Total: -11.37 -10.31 -21.68 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_6672420.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.647 kcal (2) G-P(sol) polarization free energy of solvation -11.368 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.279 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.309 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.676 kcal (6) G-S(sol) free energy of system = (1) + (5) 26.970 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds