Wall clock time and date at job start Sun Mar 7 2021 04:35:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50699 * 109.47249 * 239.99737 * 2 1 3 5 5 C 1.34241 * 126.49879 * 104.69377 * 4 2 1 6 6 N 1.36835 * 109.93573 * 179.83309 * 5 4 2 7 7 C 1.46505 * 125.05961 * 180.18047 * 6 5 4 8 8 C 1.50704 * 109.46959 * 265.29803 * 7 6 5 9 9 O 1.21277 * 120.00062 * 0.02562 * 8 7 6 10 10 N 1.34778 * 119.99442 * 180.02562 * 8 7 6 11 11 C 1.46503 * 119.99592 * 180.02562 * 10 8 7 12 12 H 1.08997 * 112.85094 * 25.33154 * 11 10 8 13 13 C 1.53782 * 113.61323 * 156.52848 * 11 10 8 14 14 C 1.53782 * 87.07907 * 139.98010 * 13 11 10 15 15 H 1.09006 * 113.61106 * 89.20338 * 14 13 11 16 16 C 1.50701 * 113.61311 * 220.01560 * 14 13 11 17 17 N 1.30497 * 125.65212 * 265.02680 * 16 14 13 18 18 C 1.34125 * 109.25504 * 180.02562 * 17 16 14 19 19 C 1.34671 * 108.02482 * 359.97438 * 18 17 16 20 20 N 1.35044 * 125.64418 * 84.72471 * 16 14 13 21 21 C 1.53784 * 113.61330 * 254.13498 * 11 10 8 22 22 C 1.37692 * 109.87742 * 0.44512 * 6 5 4 23 23 C 1.39083 * 133.51798 * 179.69204 * 22 6 5 24 24 C 1.37789 * 119.77827 * 180.02562 * 23 22 6 25 25 C 1.38779 * 120.66846 * 359.97438 * 24 23 22 26 26 C 1.36660 * 120.52810 * 0.02615 * 25 24 23 27 27 C 1.39591 * 119.76380 * 359.97438 * 26 25 24 28 28 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 29 29 H 1.09004 * 109.47449 * 120.00278 * 2 1 3 30 30 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 31 31 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 32 32 H 1.07995 * 125.03119 * 359.97438 * 5 4 2 33 33 H 1.08992 * 109.47139 * 25.30382 * 7 6 5 34 34 H 1.09004 * 109.46728 * 145.30321 * 7 6 5 35 35 H 0.96996 * 120.00146 * 0.02562 * 10 8 7 36 36 H 1.09001 * 113.61581 * 254.53046 * 13 11 10 37 37 H 1.09002 * 113.61286 * 25.35360 * 13 11 10 38 38 H 1.07998 * 125.99022 * 180.02562 * 18 17 16 39 39 H 1.07994 * 126.59617 * 180.02562 * 19 18 17 40 40 H 0.96994 * 126.40401 * 359.97438 * 20 16 14 41 41 H 1.08994 * 113.61571 * 334.56853 * 21 11 10 42 42 H 1.09001 * 113.61202 * 105.47188 * 21 11 10 43 43 H 1.08006 * 120.10584 * 0.04982 * 23 22 6 44 44 H 1.08001 * 119.66252 * 180.02562 * 24 23 22 45 45 H 1.08005 * 119.73954 * 179.97438 * 25 24 23 46 46 H 1.08001 * 120.11948 * 179.97438 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.4555 -0.1373 -2.3253 6 7 2.8029 -1.0991 -3.2345 7 6 3.4077 -0.8404 -4.5436 8 6 2.3280 -0.7840 -5.5934 9 8 1.1676 -0.9436 -5.2791 10 7 2.6521 -0.5562 -6.8817 11 6 1.6025 -0.5008 -7.9022 12 1 0.6312 -0.2192 -7.4956 13 6 2.0017 0.2989 -9.1537 14 6 1.2854 -0.7840 -9.9778 15 1 0.2271 -0.5801 -10.1407 16 6 2.0113 -1.1571 -11.2447 17 7 1.7819 -0.6571 -12.4281 18 6 2.6139 -1.2218 -13.3157 19 6 3.3887 -2.1049 -12.6573 20 7 3.0106 -2.0601 -11.3424 21 6 1.5551 -1.7446 -8.8053 22 6 2.4939 -2.3458 -2.7383 23 6 2.6281 -3.6362 -3.2395 24 6 2.2139 -4.7107 -2.4828 25 6 1.6636 -4.5193 -1.2232 26 6 1.5224 -3.2601 -0.7114 27 6 1.9353 -2.1572 -1.4608 28 1 -0.3934 0.4417 -0.7651 29 1 1.7923 -0.5139 0.8900 30 1 1.5879 2.4585 -1.2243 31 1 1.5615 2.4679 1.2085 32 1 2.5861 0.9254 -2.4665 33 1 3.9387 0.1110 -4.5168 34 1 4.1076 -1.6405 -4.7848 35 1 3.5802 -0.4289 -7.1331 36 1 1.5283 1.2788 -9.2151 37 1 3.0779 0.3373 -9.3223 38 1 2.6559 -1.0055 -14.3730 39 1 4.1626 -2.7257 -13.0838 40 1 3.3885 -2.5813 -10.6169 41 1 2.5089 -2.2670 -8.8794 42 1 0.7217 -2.4120 -8.5859 43 1 3.0559 -3.7955 -4.2183 44 1 2.3194 -5.7120 -2.8736 45 1 1.3436 -5.3723 -0.6432 46 1 1.0929 -3.1188 0.2694 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14772358_9818708.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:35:39 Heat of formation + Delta-G solvation = 95.810359 kcal Electronic energy + Delta-G solvation = -30174.987568 eV Core-core repulsion = 26034.003732 eV Total energy + Delta-G solvation = -4140.983836 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.153 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -43.17597 -42.52523 -41.13830 -39.43551 -38.04923 -37.58867 -34.93829 -34.02681 -33.49610 -31.49544 -30.65943 -30.15705 -29.02200 -27.08668 -26.46114 -25.42921 -23.69210 -22.91153 -22.57297 -21.95253 -21.65532 -20.95311 -20.59209 -19.21808 -18.64786 -18.49901 -17.74698 -17.41111 -17.00363 -16.65678 -16.33732 -16.29855 -16.05166 -15.87060 -15.61903 -15.31811 -15.02828 -14.84477 -14.72823 -14.63473 -14.44206 -14.19634 -14.02544 -13.89290 -13.81840 -13.51157 -13.28325 -12.70473 -12.62715 -12.48909 -12.29731 -12.23649 -11.93800 -11.90677 -11.65262 -11.17077 -11.03249 -11.02517 -10.46250 -10.36767 -10.35670 -9.41324 -9.06160 -8.57040 -4.92674 0.24091 0.75639 0.99571 1.28193 1.33590 1.39233 1.61038 1.67777 1.95534 2.02291 2.09588 2.12523 3.04438 3.09013 3.18327 3.33251 3.38721 3.45773 3.55120 3.57896 3.69757 3.75465 3.76687 3.82485 4.03763 4.04247 4.26418 4.28041 4.32868 4.38609 4.41300 4.43459 4.56325 4.58452 4.66141 4.68847 4.72489 4.77443 4.87022 4.90488 4.96307 5.08173 5.21181 5.22480 5.60997 5.73870 5.77251 5.82729 5.86712 6.06719 6.25420 6.28824 6.32387 6.59580 6.89976 7.09030 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.037 4.037 3 Si 0.682 3.318 4 C -0.192 4.192 5 C 0.066 3.934 6 N -0.466 5.466 7 C 0.091 3.909 8 C 0.492 3.508 9 O -0.511 6.511 10 N -0.719 5.719 11 C 0.127 3.873 12 H 0.123 0.877 13 C -0.131 4.131 14 C -0.022 4.022 15 H 0.126 0.874 16 C 0.219 3.781 17 N -0.485 5.485 18 C -0.026 4.026 19 C -0.056 4.056 20 N -0.566 5.566 21 C -0.150 4.150 22 C 0.109 3.891 23 C -0.128 4.128 24 C -0.096 4.096 25 C -0.146 4.146 26 C -0.064 4.064 27 C -0.086 4.086 28 H 0.374 0.626 29 H 0.114 0.886 30 H -0.261 1.261 31 H -0.256 1.256 32 H 0.169 0.831 33 H 0.124 0.876 34 H 0.118 0.882 35 H 0.402 0.598 36 H 0.089 0.911 37 H 0.088 0.912 38 H 0.172 0.828 39 H 0.179 0.821 40 H 0.416 0.584 41 H 0.080 0.920 42 H 0.086 0.914 43 H 0.113 0.887 44 H 0.124 0.876 45 H 0.123 0.877 46 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.188 -0.469 -2.056 8.455 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.148 4.148 3 Si 0.584 3.416 4 C -0.200 4.200 5 C -0.059 4.059 6 N -0.149 5.149 7 C -0.035 4.035 8 C 0.276 3.724 9 O -0.384 6.384 10 N -0.372 5.372 11 C 0.022 3.978 12 H 0.140 0.860 13 C -0.171 4.171 14 C -0.042 4.042 15 H 0.144 0.856 16 C -0.045 4.045 17 N -0.204 5.204 18 C -0.174 4.174 19 C -0.189 4.189 20 N -0.170 5.170 21 C -0.189 4.189 22 C 0.004 3.996 23 C -0.149 4.149 24 C -0.116 4.116 25 C -0.165 4.165 26 C -0.083 4.083 27 C -0.090 4.090 28 H 0.222 0.778 29 H 0.132 0.868 30 H -0.186 1.186 31 H -0.181 1.181 32 H 0.186 0.814 33 H 0.142 0.858 34 H 0.136 0.864 35 H 0.237 0.763 36 H 0.107 0.893 37 H 0.107 0.893 38 H 0.189 0.811 39 H 0.196 0.804 40 H 0.255 0.745 41 H 0.099 0.901 42 H 0.105 0.895 43 H 0.132 0.868 44 H 0.142 0.858 45 H 0.141 0.859 46 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 6.753 0.651 -1.783 7.015 hybrid contribution 0.310 -1.085 -0.650 1.302 sum 7.063 -0.434 -2.432 7.483 Atomic orbital electron populations 1.86594 1.18064 1.79933 1.49051 1.24293 0.83408 1.09764 0.97290 0.95351 0.91426 0.74498 0.80374 1.20595 1.09447 0.92336 0.97630 1.21588 1.01129 0.93943 0.89203 1.43199 1.53810 1.04623 1.13307 1.21599 0.94520 1.06051 0.81347 1.21101 0.90877 0.76901 0.83570 1.90820 1.19922 1.46913 1.80787 1.45933 1.10672 1.73700 1.06883 1.22486 0.93314 0.96000 0.85968 0.85961 1.23416 1.01517 0.99067 0.93071 1.20782 1.00166 0.97053 0.86212 0.85642 1.22834 0.92521 0.93283 0.95873 1.70253 1.25160 1.26246 0.98772 1.22435 0.96574 0.98372 1.00000 1.22831 1.05829 1.06664 0.83604 1.43259 1.29895 1.34044 1.09791 1.23597 1.02947 0.97674 0.94708 1.18165 1.01397 0.85827 0.94174 1.19933 1.05416 0.89283 1.00248 1.20822 0.98346 0.97928 0.94458 1.20674 1.02403 0.96977 0.96419 1.20317 0.97759 0.90911 0.99298 1.18941 1.03169 0.92790 0.94094 0.77822 0.86817 1.18586 1.18110 0.81425 0.85826 0.86395 0.76286 0.89259 0.89335 0.81100 0.80430 0.74546 0.90111 0.89538 0.86848 0.85761 0.85909 0.85881 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.65 12.88 -35.23 -0.45 -2.10 16 2 C -0.04 -0.04 3.06 36.01 0.11 0.07 16 3 Si 0.68 -0.44 30.83 -169.99 -5.24 -5.68 16 4 C -0.19 -0.39 5.57 -102.71 -0.57 -0.97 16 5 C 0.07 0.04 9.89 -16.73 -0.17 -0.13 16 6 N -0.47 -0.29 2.27 -115.71 -0.26 -0.55 16 7 C 0.09 -0.30 6.48 -5.19 -0.03 -0.34 16 8 C 0.49 -0.47 7.90 -10.98 -0.09 -0.56 16 9 O -0.51 -2.20 16.04 5.56 0.09 -2.12 16 10 N -0.72 2.81 5.36 -53.01 -0.28 2.52 16 11 C 0.13 -0.36 4.21 -67.11 -0.28 -0.64 16 12 H 0.12 -0.10 7.50 -51.93 -0.39 -0.49 16 13 C -0.13 0.43 7.38 -25.92 -0.19 0.24 16 14 C -0.02 0.04 4.29 -90.87 -0.39 -0.35 16 15 H 0.13 -0.19 8.14 -51.93 -0.42 -0.61 16 16 C 0.22 0.12 7.36 -155.42 -1.14 -1.03 16 17 N -0.49 -1.72 11.25 -10.82 -0.12 -1.84 16 18 C -0.03 -0.04 11.87 -17.81 -0.21 -0.25 16 19 C -0.06 0.05 12.04 -16.56 -0.20 -0.15 16 20 N -0.57 0.91 5.94 -10.23 -0.06 0.85 16 21 C -0.15 0.47 7.37 -25.83 -0.19 0.28 16 22 C 0.11 0.31 6.80 -83.99 -0.57 -0.26 16 23 C -0.13 -0.25 10.00 -39.43 -0.39 -0.65 16 24 C -0.10 -0.17 10.01 -39.55 -0.40 -0.56 16 25 C -0.15 -0.33 9.97 -39.95 -0.40 -0.73 16 26 C -0.06 -0.21 10.05 -39.65 -0.40 -0.61 16 27 C -0.09 -0.32 6.35 -105.14 -0.67 -0.99 16 28 H 0.37 0.26 8.70 45.56 0.40 0.66 16 29 H 0.11 0.07 7.96 -51.93 -0.41 -0.34 16 30 H -0.26 -0.23 6.99 56.52 0.40 0.16 16 31 H -0.26 -0.70 7.11 56.52 0.40 -0.30 16 32 H 0.17 -0.35 6.27 -52.49 -0.33 -0.68 16 33 H 0.12 -0.81 8.12 -51.93 -0.42 -1.23 16 34 H 0.12 -0.66 8.14 -51.93 -0.42 -1.08 16 35 H 0.40 -2.80 8.71 -40.82 -0.36 -3.16 16 36 H 0.09 -0.26 8.14 -51.93 -0.42 -0.68 16 37 H 0.09 -0.34 8.06 -51.93 -0.42 -0.76 16 38 H 0.17 -0.04 8.06 -52.49 -0.42 -0.46 16 39 H 0.18 -0.69 8.06 -52.49 -0.42 -1.11 16 40 H 0.42 -1.88 7.54 -40.82 -0.31 -2.19 16 41 H 0.08 -0.37 6.65 -51.93 -0.35 -0.71 16 42 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 43 H 0.11 -0.01 8.06 -52.48 -0.42 -0.44 16 44 H 0.12 -0.05 8.06 -52.49 -0.42 -0.48 16 45 H 0.12 0.04 8.06 -52.48 -0.42 -0.38 16 46 H 0.12 0.29 8.06 -52.49 -0.42 -0.13 16 LS Contribution 389.71 15.07 5.87 5.87 Total: 0.00 -13.02 389.71 -12.66 -25.68 By element: Atomic # 1 Polarization: -9.00 SS G_CDS: -6.02 Total: -15.02 kcal Atomic # 6 Polarization: -1.43 SS G_CDS: -6.18 Total: -7.62 kcal Atomic # 7 Polarization: 1.71 SS G_CDS: -0.73 Total: 0.98 kcal Atomic # 8 Polarization: -3.85 SS G_CDS: -0.36 Total: -4.22 kcal Atomic # 14 Polarization: -0.44 SS G_CDS: -5.24 Total: -5.68 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -13.02 -12.66 -25.68 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_9818708.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 121.488 kcal (2) G-P(sol) polarization free energy of solvation -13.016 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 108.472 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.662 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.678 kcal (6) G-S(sol) free energy of system = (1) + (5) 95.810 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds