Wall clock time and date at job start Sun Mar 7 2021 03:47:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 O 1.42894 * 109.47271 * 2 1 4 4 C 1.35903 * 116.99937 * 276.63949 * 3 2 1 5 5 C 1.38729 * 120.05552 * 357.81109 * 4 3 2 6 6 C 1.38146 * 119.94234 * 179.70416 * 5 4 3 7 7 C 1.38270 * 120.05786 * 0.59841 * 6 5 4 8 8 C 1.50688 * 119.94831 * 179.70315 * 7 6 5 9 9 O 1.42896 * 109.47274 * 244.98133 * 8 7 6 10 10 Si 1.86302 * 109.47147 * 4.97631 * 8 7 6 11 11 C 1.38269 * 120.10646 * 359.67715 * 7 6 5 12 12 C 1.38149 * 120.05814 * 0.02562 * 11 7 6 13 13 C 1.50705 * 109.47101 * 120.00139 * 2 1 3 14 14 O 1.21277 * 119.99547 * 254.14473 * 13 2 1 15 15 N 1.34774 * 120.00173 * 74.14485 * 13 2 1 16 16 C 1.46508 * 119.99829 * 5.23919 * 15 13 2 17 17 C 1.46501 * 120.00183 * 185.24069 * 15 13 2 18 18 H 1.08997 * 112.84636 * 11.19742 * 17 15 13 19 19 C 1.53785 * 113.61465 * 142.50057 * 17 15 13 20 20 C 1.53782 * 87.07813 * 89.11645 * 19 17 15 21 21 H 1.08996 * 113.69157 * 270.87066 * 20 19 17 22 22 C 1.50703 * 113.61115 * 139.98295 * 20 19 17 23 23 C 1.38236 * 119.99954 * 322.22519 * 22 20 19 24 24 C 1.38229 * 119.99972 * 179.76627 * 23 22 20 25 25 C 1.38235 * 119.99873 * 0.51433 * 24 23 22 26 26 C 1.38226 * 119.99997 * 359.73996 * 25 24 23 27 27 C 1.38229 * 120.00100 * 142.50198 * 22 20 19 28 28 C 1.53777 * 113.61545 * 239.99837 * 17 15 13 29 29 H 1.09005 * 109.47205 * 175.18924 * 1 2 3 30 30 H 1.08996 * 109.47159 * 55.19200 * 1 2 3 31 31 H 1.09000 * 109.47097 * 295.18544 * 1 2 3 32 32 H 1.09007 * 109.46851 * 239.99936 * 2 1 3 33 33 H 1.07999 * 120.02820 * 0.02562 * 5 4 3 34 34 H 1.07997 * 119.97177 * 180.32430 * 6 5 4 35 35 H 1.09002 * 109.47720 * 124.97710 * 8 7 6 36 36 H 0.96703 * 114.00325 * 180.02562 * 9 8 7 37 37 H 1.48500 * 110.00132 * 300.00442 * 10 8 7 38 38 H 1.48503 * 109.99744 * 61.32083 * 10 8 7 39 39 H 1.07997 * 119.96753 * 179.97438 * 11 7 6 40 40 H 1.07993 * 120.02683 * 180.02562 * 12 11 7 41 41 H 1.08997 * 109.46643 * 95.25153 * 16 15 13 42 42 H 1.08996 * 109.46955 * 215.25294 * 16 15 13 43 43 H 1.09002 * 109.47152 * 335.25078 * 16 15 13 44 44 H 1.08996 * 113.61531 * 203.66550 * 19 17 15 45 45 H 1.09003 * 113.61484 * 334.56959 * 19 17 15 46 46 H 1.08004 * 119.99806 * 0.02562 * 23 22 20 47 47 H 1.08007 * 119.99868 * 180.23067 * 24 23 22 48 48 H 1.08008 * 119.99665 * 179.72769 * 25 24 23 49 49 H 1.08002 * 120.00304 * 179.97438 * 26 25 24 50 50 H 1.07997 * 119.99940 * 0.02562 * 27 22 20 51 51 H 1.09004 * 113.61500 * 25.43599 * 28 17 15 52 52 H 1.08999 * 113.61397 * 156.25009 * 28 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3472 0.0000 4 6 2.0800 1.9756 -1.2028 5 6 1.7449 1.2947 -2.3641 6 6 1.8148 1.9375 -3.5849 7 6 2.2302 3.2547 -3.6512 8 6 2.3119 3.9514 -4.9849 9 8 3.6740 4.2753 -5.2704 10 14 1.6491 2.8273 -6.3145 11 6 2.5702 3.9337 -2.4958 12 6 2.4962 3.2972 -1.2719 13 6 2.0324 -0.7105 1.2305 14 8 2.5050 -0.0735 2.1479 15 7 1.9564 -2.0536 1.3114 16 6 1.4927 -2.8317 0.1598 17 6 2.3374 -2.7356 2.5507 18 1 2.4760 -2.0492 3.3860 19 6 1.4495 -3.9457 2.8860 20 6 2.4276 -4.7937 2.0559 21 1 2.1698 -4.8500 0.9984 22 6 2.7190 -6.1433 2.6598 23 6 2.8396 -6.2757 4.0306 24 6 3.1020 -7.5145 4.5848 25 6 3.2545 -8.6190 3.7677 26 6 3.1392 -8.4857 2.3967 27 6 2.8714 -7.2478 1.8428 28 6 3.4945 -3.7330 2.3744 29 1 -0.3634 -1.0241 -0.0862 30 1 -0.3633 0.5866 -0.8437 31 1 -0.3633 0.4373 0.9300 32 1 1.8933 -0.5139 -0.8900 33 1 1.4246 0.2645 -2.3133 34 1 1.5489 1.4095 -4.4887 35 1 1.7197 4.8660 -4.9540 36 1 3.8020 4.7273 -6.1157 37 1 2.4480 1.5765 -6.3669 38 1 0.2237 2.5086 -6.0461 39 1 2.8948 4.9623 -2.5502 40 1 2.7615 3.8282 -0.3697 41 1 2.3520 -3.1789 -0.4138 42 1 0.9181 -3.6897 0.5088 43 1 0.8629 -2.2054 -0.4721 44 1 1.4411 -4.2008 3.9457 45 1 0.4497 -3.8861 2.4560 46 1 2.7245 -5.4120 4.6687 47 1 3.1925 -7.6186 5.6561 48 1 3.4640 -9.5861 4.2006 49 1 3.2587 -9.3485 1.7582 50 1 2.7820 -7.1435 0.7716 51 1 4.1456 -3.5017 1.5313 52 1 4.0460 -3.9288 3.2938 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14797354_10157680.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:47:33 Heat of formation + Delta-G solvation = 1.002942 kcal Electronic energy + Delta-G solvation = -32613.382295 eV Core-core repulsion = 28318.571363 eV Total energy + Delta-G solvation = -4294.810932 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.182 amu Computer time = 4.60 seconds Orbital eigenvalues (eV) -42.20968 -41.42233 -40.33804 -39.26551 -38.55058 -37.21361 -35.76657 -33.36106 -32.10015 -31.90080 -31.76861 -31.40329 -28.66273 -26.96056 -26.80625 -26.19720 -25.11451 -24.17491 -23.58022 -22.63376 -21.99598 -21.09604 -19.78716 -19.53790 -18.48139 -18.37863 -17.94599 -17.51352 -16.97058 -16.92914 -16.72868 -16.35161 -16.19627 -16.01931 -15.65108 -15.49136 -15.24989 -15.07923 -14.73815 -14.58319 -14.43389 -14.28479 -14.25137 -13.98139 -13.92754 -13.84454 -13.62846 -13.57285 -13.32120 -13.17558 -13.11228 -12.94260 -12.76586 -12.36158 -12.25424 -12.17934 -11.91315 -11.81879 -11.79229 -11.70694 -11.26267 -10.76786 -10.32039 -10.06178 -9.87315 -9.83006 -9.57397 -9.20589 -5.00667 0.26101 0.27723 0.39762 0.47057 1.25727 1.29286 1.41343 1.59945 1.92794 2.29112 2.60464 2.79611 3.12613 3.35957 3.40033 3.45533 3.54890 3.60179 3.67038 3.68405 3.76425 3.79082 3.85116 3.93044 3.93490 4.07069 4.10225 4.17626 4.19727 4.21123 4.24219 4.33608 4.38860 4.41390 4.49012 4.51104 4.54426 4.61772 4.62795 4.63977 4.74186 4.82180 4.88525 4.89588 4.90971 5.03747 5.07006 5.10935 5.14857 5.21979 5.43432 5.48789 5.54659 5.61120 5.66040 5.69282 6.06922 6.09209 6.30183 6.61992 6.98463 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.066 3.934 3 O -0.283 6.283 4 C 0.136 3.864 5 C -0.207 4.207 6 C -0.081 4.081 7 C -0.113 4.113 8 C -0.066 4.066 9 O -0.546 6.546 10 Si 0.681 3.319 11 C -0.047 4.047 12 C -0.144 4.144 13 C 0.524 3.476 14 O -0.507 6.507 15 N -0.595 5.595 16 C 0.056 3.944 17 C 0.120 3.880 18 H 0.112 0.888 19 C -0.140 4.140 20 C -0.080 4.080 21 H 0.103 0.897 22 C -0.072 4.072 23 C -0.117 4.117 24 C -0.117 4.117 25 C -0.124 4.124 26 C -0.118 4.118 27 C -0.117 4.117 28 C -0.138 4.138 29 H 0.083 0.917 30 H 0.079 0.921 31 H 0.078 0.922 32 H 0.097 0.903 33 H 0.131 0.869 34 H 0.121 0.879 35 H 0.074 0.926 36 H 0.382 0.618 37 H -0.252 1.252 38 H -0.255 1.255 39 H 0.136 0.864 40 H 0.138 0.862 41 H 0.064 0.936 42 H 0.085 0.915 43 H 0.078 0.922 44 H 0.101 0.899 45 H 0.077 0.923 46 H 0.122 0.878 47 H 0.122 0.878 48 H 0.121 0.879 49 H 0.122 0.878 50 H 0.120 0.880 51 H 0.074 0.926 52 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.126 -2.155 -5.121 6.375 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C 0.006 3.994 3 O -0.195 6.195 4 C 0.091 3.909 5 C -0.226 4.226 6 C -0.098 4.098 7 C -0.113 4.113 8 C -0.177 4.177 9 O -0.352 6.352 10 Si 0.583 3.417 11 C -0.065 4.065 12 C -0.163 4.163 13 C 0.310 3.690 14 O -0.380 6.380 15 N -0.329 5.329 16 C -0.087 4.087 17 C 0.016 3.984 18 H 0.129 0.871 19 C -0.178 4.178 20 C -0.098 4.098 21 H 0.121 0.879 22 C -0.072 4.072 23 C -0.135 4.135 24 C -0.135 4.135 25 C -0.142 4.142 26 C -0.136 4.136 27 C -0.135 4.135 28 C -0.177 4.177 29 H 0.101 0.899 30 H 0.098 0.902 31 H 0.097 0.903 32 H 0.115 0.885 33 H 0.149 0.851 34 H 0.138 0.862 35 H 0.091 0.909 36 H 0.229 0.771 37 H -0.176 1.176 38 H -0.180 1.180 39 H 0.154 0.846 40 H 0.156 0.844 41 H 0.083 0.917 42 H 0.104 0.896 43 H 0.096 0.904 44 H 0.119 0.881 45 H 0.096 0.904 46 H 0.140 0.860 47 H 0.140 0.860 48 H 0.139 0.861 49 H 0.140 0.860 50 H 0.138 0.862 51 H 0.093 0.907 52 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -3.091 -2.788 -4.029 5.794 hybrid contribution -0.047 -0.296 0.297 0.422 sum -3.138 -3.084 -3.732 5.770 Atomic orbital electron populations 1.22389 0.92118 1.04034 1.05041 1.22214 0.96073 0.83154 0.97943 1.86234 1.80525 1.25434 1.27306 1.19052 0.95522 0.92454 0.83884 1.21103 1.08564 1.00786 0.92117 1.20652 0.98485 0.93787 0.96897 1.19249 1.03818 0.94096 0.94171 1.24605 0.88085 1.04873 1.00160 1.86504 1.23907 1.81338 1.43490 0.95325 0.79245 0.80743 0.86431 1.20855 0.95230 1.00099 0.90314 1.20540 1.04388 0.92232 0.99127 1.20031 0.78781 0.81867 0.88299 1.90765 1.42760 1.65267 1.39235 1.47363 1.66336 1.05097 1.14144 1.22249 1.00460 0.97646 0.88329 1.21959 0.95716 0.93701 0.87017 0.87052 1.23502 0.98382 0.94356 1.01583 1.21829 0.97328 0.90713 0.99940 0.87935 1.19687 0.99504 0.94474 0.93541 1.21021 1.00399 0.97596 0.94512 1.21185 0.99530 0.92806 0.99975 1.21203 1.00254 0.98887 0.93854 1.21182 0.99625 0.97485 0.95283 1.21053 1.00419 0.92469 0.99574 1.23457 0.96444 0.94518 1.03247 0.89869 0.90227 0.90279 0.88509 0.85082 0.86188 0.90853 0.77085 1.17645 1.18020 0.84576 0.84396 0.91732 0.89645 0.90393 0.88100 0.90437 0.85993 0.85987 0.86067 0.86036 0.86233 0.90715 0.88511 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.19 8.93 37.16 0.33 0.52 16 2 C 0.07 0.07 1.80 -27.88 -0.05 0.02 16 3 O -0.28 -1.18 9.38 -38.94 -0.37 -1.55 16 4 C 0.14 0.45 6.52 -39.22 -0.26 0.19 16 5 C -0.21 -0.38 8.32 -39.43 -0.33 -0.71 16 6 C -0.08 -0.19 8.66 -39.60 -0.34 -0.53 16 7 C -0.11 -0.28 5.38 -104.60 -0.56 -0.84 16 8 C -0.07 0.00 2.79 36.00 0.10 0.10 16 9 O -0.55 -0.22 12.81 -35.23 -0.45 -0.67 16 10 Si 0.68 -0.77 29.84 -169.99 -5.07 -5.85 16 11 C -0.05 -0.11 9.68 -39.60 -0.38 -0.50 16 12 C -0.14 -0.44 9.99 -39.43 -0.39 -0.83 16 13 C 0.52 1.54 6.97 -10.98 -0.08 1.47 16 14 O -0.51 -3.76 16.07 -13.94 -0.22 -3.99 16 15 N -0.59 0.04 3.08 -173.00 -0.53 -0.50 16 16 C 0.06 -0.19 8.25 59.85 0.49 0.31 16 17 C 0.12 0.00 4.44 -67.12 -0.30 -0.30 16 18 H 0.11 0.20 7.27 -51.93 -0.38 -0.18 16 19 C -0.14 0.24 6.67 -25.92 -0.17 0.06 16 20 C -0.08 0.12 3.32 -90.96 -0.30 -0.18 16 21 H 0.10 -0.27 5.54 -51.93 -0.29 -0.56 16 22 C -0.07 0.00 5.29 -104.62 -0.55 -0.55 16 23 C -0.12 -0.02 8.60 -39.59 -0.34 -0.36 16 24 C -0.12 -0.05 10.05 -39.59 -0.40 -0.45 16 25 C -0.12 -0.06 10.05 -39.59 -0.40 -0.46 16 26 C -0.12 -0.05 10.05 -39.59 -0.40 -0.44 16 27 C -0.12 -0.02 9.71 -39.59 -0.38 -0.41 16 28 C -0.14 0.08 7.21 -25.92 -0.19 -0.10 16 29 H 0.08 -0.28 6.19 -51.93 -0.32 -0.61 16 30 H 0.08 -0.10 7.30 -51.93 -0.38 -0.48 16 31 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 32 H 0.10 -0.11 5.12 -51.93 -0.27 -0.38 16 33 H 0.13 -0.10 5.70 -52.49 -0.30 -0.40 16 34 H 0.12 0.17 4.86 -52.49 -0.26 -0.08 16 35 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 36 H 0.38 -1.78 8.74 45.56 0.40 -1.38 16 37 H -0.25 -0.48 7.05 56.52 0.40 -0.08 16 38 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 39 H 0.14 0.11 8.06 -52.49 -0.42 -0.32 16 40 H 0.14 0.29 8.06 -52.49 -0.42 -0.13 16 41 H 0.06 -0.25 8.04 -51.93 -0.42 -0.67 16 42 H 0.09 -0.37 5.17 -51.93 -0.27 -0.64 16 43 H 0.08 -0.37 4.42 -51.93 -0.23 -0.60 16 44 H 0.10 -0.19 6.32 -51.93 -0.33 -0.52 16 45 H 0.08 -0.16 7.28 -51.93 -0.38 -0.54 16 46 H 0.12 -0.15 6.67 -52.48 -0.35 -0.50 16 47 H 0.12 -0.13 8.06 -52.48 -0.42 -0.56 16 48 H 0.12 -0.12 8.06 -52.48 -0.42 -0.54 16 49 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 50 H 0.12 -0.17 8.05 -52.49 -0.42 -0.59 16 51 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 52 H 0.10 -0.05 7.72 -51.93 -0.40 -0.45 16 LS Contribution 406.96 15.07 6.13 6.13 Total: 0.00 -9.86 406.96 -12.57 -22.43 By element: Atomic # 1 Polarization: -4.85 SS G_CDS: -7.16 Total: -12.01 kcal Atomic # 6 Polarization: 0.90 SS G_CDS: -4.90 Total: -4.00 kcal Atomic # 7 Polarization: 0.04 SS G_CDS: -0.53 Total: -0.50 kcal Atomic # 8 Polarization: -5.17 SS G_CDS: -1.04 Total: -6.21 kcal Atomic # 14 Polarization: -0.77 SS G_CDS: -5.07 Total: -5.85 kcal Total LS contribution 6.13 Total: 6.13 kcal Total: -9.86 -12.57 -22.43 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14797354_10157680.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.437 kcal (2) G-P(sol) polarization free energy of solvation -9.863 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.574 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.571 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.434 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.003 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 4.61 seconds