Wall clock time and date at job start Sun Mar 7 2021 03:47:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.34783 * 119.99931 * 2 1 4 4 O 1.21696 * 119.99719 * 183.16295 * 3 2 1 5 5 C 1.46672 * 119.99950 * 3.15563 * 3 2 1 6 6 C 1.37873 * 126.23493 * 352.90635 * 5 3 2 7 7 C 1.39835 * 107.08445 * 180.02562 * 6 5 3 8 8 C 1.35448 * 107.86759 * 0.02562 * 7 6 5 9 9 C 1.50703 * 125.56613 * 179.97438 * 8 7 6 10 10 O 1.42901 * 109.47035 * 210.02428 * 9 8 7 11 11 Si 1.86295 * 109.46979 * 330.01904 * 9 8 7 12 12 N 1.35534 * 108.86966 * 0.26187 * 8 7 6 13 13 C 1.46511 * 125.67738 * 179.71966 * 12 8 7 14 14 C 1.46497 * 120.00101 * 179.97438 * 2 1 3 15 15 H 1.09003 * 112.85346 * 199.05368 * 14 2 1 16 16 C 1.53787 * 113.61404 * 330.25123 * 14 2 1 17 17 C 1.54058 * 86.98212 * 89.16045 * 16 14 2 18 18 H 1.08999 * 113.60892 * 270.88115 * 17 16 14 19 19 C 1.50703 * 113.69315 * 139.99236 * 17 16 14 20 20 C 1.38243 * 119.99749 * 322.19334 * 19 17 16 21 21 C 1.38238 * 119.99581 * 179.77028 * 20 19 17 22 22 C 1.38228 * 120.00006 * 0.50171 * 21 20 19 23 23 C 1.38242 * 120.00081 * 359.74721 * 22 21 20 24 24 C 1.38228 * 119.99972 * 142.46533 * 19 17 16 25 25 C 1.53776 * 113.61278 * 67.85922 * 14 2 1 26 26 H 1.08999 * 109.46893 * 65.66473 * 1 2 3 27 27 H 1.08999 * 109.47579 * 185.66517 * 1 2 3 28 28 H 1.09001 * 109.47371 * 305.67053 * 1 2 3 29 29 H 1.07991 * 126.45662 * 0.05625 * 6 5 3 30 30 H 1.08001 * 126.06473 * 179.97438 * 7 6 5 31 31 H 1.09001 * 109.47209 * 90.02425 * 9 8 7 32 32 H 0.96695 * 114.00368 * 59.99352 * 10 9 8 33 33 H 1.48501 * 109.99803 * 58.68517 * 11 9 8 34 34 H 1.48498 * 110.00014 * 179.97438 * 11 9 8 35 35 H 1.08997 * 109.46953 * 93.71418 * 13 12 8 36 36 H 1.09001 * 109.46858 * 213.71718 * 13 12 8 37 37 H 1.08994 * 109.46657 * 333.71048 * 13 12 8 38 38 H 1.08998 * 113.61493 * 203.66034 * 16 14 2 39 39 H 1.09003 * 113.61303 * 334.56768 * 16 14 2 40 40 H 1.08002 * 119.99667 * 359.97438 * 20 19 17 41 41 H 1.07994 * 119.99571 * 180.23011 * 21 20 19 42 42 H 1.07999 * 120.00229 * 179.72944 * 22 21 20 43 43 H 1.07999 * 120.00071 * 179.97438 * 23 22 21 44 44 H 1.07996 * 120.00051 * 0.02562 * 24 19 17 45 45 H 1.08996 * 113.61693 * 25.43147 * 25 14 2 46 46 H 1.09006 * 113.61561 * 156.33973 * 25 14 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1388 1.1673 0.0000 4 8 3.3544 1.1680 -0.0582 5 6 1.4071 2.4365 0.0699 6 6 0.0390 2.5933 0.0020 7 6 -0.2233 3.9627 0.1084 8 6 0.9627 4.6043 0.2361 9 6 1.1426 6.0938 0.3789 10 8 2.3955 6.4790 -0.1902 11 14 -0.2391 6.9740 -0.5081 12 7 1.9617 3.6888 0.2079 13 6 3.3933 3.9827 0.3114 14 6 2.1975 -1.2687 0.0006 15 1 3.2314 -1.1604 0.3284 16 6 1.4460 -2.4136 0.7003 17 6 0.8075 -2.7215 -0.6675 18 1 -0.1175 -2.1747 -0.8505 19 6 0.6842 -4.1946 -0.9604 20 6 1.6863 -5.0632 -0.5699 21 6 1.5710 -6.4151 -0.8344 22 6 0.4586 -6.8970 -1.4985 23 6 -0.5411 -6.0277 -1.8936 24 6 -0.4282 -4.6765 -1.6246 25 6 2.0456 -2.0682 -1.3042 26 1 -0.3633 0.4235 -0.9364 27 1 -0.3634 -1.0226 0.1014 28 1 -0.3634 0.5993 0.8349 29 1 -0.6922 1.8067 -0.1114 30 1 -1.1985 4.4265 0.0910 31 1 1.1255 6.3622 1.4352 32 1 2.4813 6.2700 -1.1304 33 1 -1.5494 6.5578 0.0533 34 1 -0.0736 8.4436 -0.3743 35 1 3.7070 3.8994 1.3519 36 1 3.9547 3.2724 -0.2955 37 1 3.5829 4.9950 -0.0454 38 1 2.0995 -3.2059 1.0653 39 1 0.7321 -2.0731 1.4503 40 1 2.5576 -4.6859 -0.0553 41 1 2.3521 -7.0942 -0.5260 42 1 0.3705 -7.9526 -1.7090 43 1 -1.4100 -6.4042 -2.4128 44 1 -1.2088 -3.9973 -1.9339 45 1 1.8153 -1.4493 -2.1713 46 1 2.8627 -2.7664 -1.4861 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14797354_10803936.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:47:58 Heat of formation + Delta-G solvation = 75.660927 kcal Electronic energy + Delta-G solvation = -27687.087559 eV Core-core repulsion = 23932.534081 eV Total energy + Delta-G solvation = -3754.553478 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.162 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.70644 -41.66018 -40.02489 -38.70091 -37.87203 -35.76951 -33.63877 -32.19338 -31.79158 -31.02947 -28.87930 -27.48661 -27.05021 -26.66890 -25.59305 -23.67253 -23.05509 -21.97512 -21.63863 -20.36437 -19.77695 -18.45695 -18.29919 -17.71873 -17.33696 -16.96747 -16.44374 -16.36659 -16.13838 -15.87835 -15.51769 -15.40681 -15.16024 -15.00800 -14.72929 -14.53666 -14.30685 -14.18601 -14.05419 -13.85960 -13.66188 -13.53611 -13.20950 -13.12630 -13.00882 -12.75749 -12.51361 -12.18617 -12.07440 -11.95452 -11.72255 -11.57281 -11.23399 -10.90654 -10.61778 -9.83697 -9.80227 -9.63203 -9.52711 -9.05857 -5.05291 0.42255 0.45662 0.50147 1.10304 1.46345 1.63645 1.70716 1.93929 2.27668 2.38694 2.82772 3.13771 3.32761 3.51874 3.58061 3.63408 3.68246 3.86478 3.91378 4.03514 4.04870 4.10884 4.16283 4.23692 4.33548 4.37800 4.39445 4.46327 4.50568 4.53312 4.57954 4.64443 4.66443 4.68867 4.80187 4.88254 4.89115 4.95649 5.01661 5.09811 5.11757 5.14442 5.17912 5.51223 5.57758 5.64004 5.71969 5.77537 6.01517 6.10025 6.17772 6.28097 6.35408 7.16508 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.049 3.951 2 N -0.585 5.585 3 C 0.592 3.408 4 O -0.545 6.545 5 C -0.049 4.049 6 C -0.155 4.155 7 C -0.208 4.208 8 C 0.015 3.985 9 C -0.050 4.050 10 O -0.541 6.541 11 Si 0.724 3.276 12 N -0.390 5.390 13 C 0.048 3.952 14 C 0.123 3.877 15 H 0.108 0.892 16 C -0.141 4.141 17 C -0.082 4.082 18 H 0.106 0.894 19 C -0.072 4.072 20 C -0.117 4.117 21 C -0.117 4.117 22 C -0.124 4.124 23 C -0.118 4.118 24 C -0.117 4.117 25 C -0.138 4.138 26 H 0.071 0.929 27 H 0.090 0.910 28 H 0.079 0.921 29 H 0.167 0.833 30 H 0.146 0.854 31 H 0.119 0.881 32 H 0.382 0.618 33 H -0.251 1.251 34 H -0.253 1.253 35 H 0.070 0.930 36 H 0.098 0.902 37 H 0.112 0.888 38 H 0.100 0.900 39 H 0.079 0.921 40 H 0.122 0.878 41 H 0.122 0.878 42 H 0.121 0.879 43 H 0.122 0.878 44 H 0.120 0.880 45 H 0.075 0.925 46 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.482 -0.961 -2.059 4.157 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 N -0.317 5.317 3 C 0.382 3.618 4 O -0.424 6.424 5 C -0.163 4.163 6 C -0.181 4.181 7 C -0.232 4.232 8 C -0.104 4.104 9 C -0.160 4.160 10 O -0.347 6.347 11 Si 0.623 3.377 12 N -0.062 5.062 13 C -0.093 4.093 14 C 0.019 3.981 15 H 0.126 0.874 16 C -0.178 4.178 17 C -0.100 4.100 18 H 0.124 0.876 19 C -0.072 4.072 20 C -0.135 4.135 21 C -0.135 4.135 22 C -0.142 4.142 23 C -0.136 4.136 24 C -0.135 4.135 25 C -0.176 4.176 26 H 0.090 0.910 27 H 0.108 0.892 28 H 0.098 0.902 29 H 0.184 0.816 30 H 0.164 0.836 31 H 0.136 0.864 32 H 0.230 0.770 33 H -0.176 1.176 34 H -0.178 1.178 35 H 0.089 0.911 36 H 0.116 0.884 37 H 0.130 0.870 38 H 0.119 0.881 39 H 0.097 0.903 40 H 0.140 0.860 41 H 0.140 0.860 42 H 0.139 0.861 43 H 0.140 0.860 44 H 0.138 0.862 45 H 0.093 0.907 46 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -2.989 -0.146 -1.372 3.292 hybrid contribution 0.180 -0.503 0.610 0.811 sum -2.808 -0.648 -0.762 2.981 Atomic orbital electron populations 1.22779 0.79575 1.04404 1.02555 1.47078 1.06834 1.04530 1.73248 1.16970 0.86225 0.82431 0.76161 1.90798 1.13399 1.87202 1.51013 1.19947 0.92694 0.85524 1.18154 1.22277 0.93439 0.97353 1.05002 1.20714 0.96848 0.94079 1.11532 1.21072 0.88212 0.92123 1.08956 1.25000 0.96416 0.90782 1.03827 1.86456 1.34987 1.84009 1.29274 0.93983 0.75253 0.78398 0.90017 1.43764 1.07114 1.04256 1.51079 1.22698 0.76989 1.05405 1.04168 1.21925 0.97146 0.81934 0.97115 0.87415 1.23565 1.00088 0.97762 0.96425 1.21949 0.99142 0.92053 0.96807 0.87609 1.19697 0.94564 0.94686 0.98227 1.21022 0.98756 0.93277 1.00480 1.21178 0.98079 0.95532 0.98746 1.21200 0.94361 0.99881 0.98796 1.21186 0.99003 0.93547 0.99844 1.21061 0.97705 0.95606 0.99112 1.23473 0.97729 0.98771 0.97651 0.91020 0.89158 0.90239 0.81631 0.83603 0.86360 0.77006 1.17579 1.17766 0.91090 0.88369 0.87026 0.88127 0.90274 0.86016 0.86028 0.86100 0.86032 0.86151 0.90653 0.88663 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.11 7.45 59.84 0.45 0.33 16 2 N -0.59 -0.40 3.07 -174.55 -0.54 -0.94 16 3 C 0.59 2.10 7.64 -12.85 -0.10 2.00 16 4 O -0.55 -3.50 14.30 5.19 0.07 -3.42 16 5 C -0.05 -0.13 6.81 -81.98 -0.56 -0.69 16 6 C -0.16 -0.10 8.78 -39.12 -0.34 -0.44 16 7 C -0.21 -0.12 9.37 -39.98 -0.37 -0.49 16 8 C 0.01 0.01 6.15 -81.95 -0.50 -0.49 16 9 C -0.05 0.03 2.99 36.01 0.11 0.14 16 10 O -0.54 0.45 9.93 -35.23 -0.35 0.10 16 11 Si 0.72 -1.38 31.29 -169.99 -5.32 -6.70 16 12 N -0.39 -0.91 3.16 -115.61 -0.37 -1.27 16 13 C 0.05 0.07 10.29 59.85 0.62 0.69 16 14 C 0.12 0.02 4.36 -67.12 -0.29 -0.27 16 15 H 0.11 0.19 7.39 -51.93 -0.38 -0.19 16 16 C -0.14 0.21 6.67 -25.77 -0.17 0.03 16 17 C -0.08 0.12 3.32 -90.81 -0.30 -0.19 16 18 H 0.11 -0.26 5.47 -51.93 -0.28 -0.54 16 19 C -0.07 0.00 5.29 -104.62 -0.55 -0.56 16 20 C -0.12 -0.02 8.60 -39.58 -0.34 -0.36 16 21 C -0.12 -0.05 10.05 -39.58 -0.40 -0.45 16 22 C -0.12 -0.06 10.05 -39.58 -0.40 -0.46 16 23 C -0.12 -0.04 10.05 -39.58 -0.40 -0.44 16 24 C -0.12 -0.02 9.71 -39.59 -0.38 -0.41 16 25 C -0.14 0.07 7.30 -25.92 -0.19 -0.12 16 26 H 0.07 -0.23 6.83 -51.93 -0.35 -0.58 16 27 H 0.09 -0.32 3.93 -51.93 -0.20 -0.53 16 28 H 0.08 -0.21 6.09 -51.93 -0.32 -0.52 16 29 H 0.17 -0.34 4.11 -52.49 -0.22 -0.56 16 30 H 0.15 -0.13 6.62 -52.49 -0.35 -0.48 16 31 H 0.12 -0.03 7.96 -51.93 -0.41 -0.44 16 32 H 0.38 -1.60 8.43 45.56 0.38 -1.22 16 33 H -0.25 -0.01 6.76 56.52 0.38 0.38 16 34 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 35 H 0.07 0.14 8.14 -51.93 -0.42 -0.28 16 36 H 0.10 0.27 6.41 -51.93 -0.33 -0.07 16 37 H 0.11 -0.03 4.90 -51.93 -0.25 -0.28 16 38 H 0.10 -0.18 6.34 -51.93 -0.33 -0.51 16 39 H 0.08 -0.13 7.31 -51.93 -0.38 -0.51 16 40 H 0.12 -0.14 6.68 -52.49 -0.35 -0.49 16 41 H 0.12 -0.13 8.06 -52.49 -0.42 -0.56 16 42 H 0.12 -0.12 8.06 -52.49 -0.42 -0.55 16 43 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 44 H 0.12 -0.18 8.05 -52.49 -0.42 -0.60 16 45 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 46 H 0.09 -0.05 7.71 -51.93 -0.40 -0.45 16 LS Contribution 355.19 15.07 5.35 5.35 Total: 0.00 -7.65 355.19 -11.22 -18.86 By element: Atomic # 1 Polarization: -3.88 SS G_CDS: -5.94 Total: -9.82 kcal Atomic # 6 Polarization: 1.97 SS G_CDS: -4.13 Total: -2.16 kcal Atomic # 7 Polarization: -1.31 SS G_CDS: -0.90 Total: -2.21 kcal Atomic # 8 Polarization: -3.05 SS G_CDS: -0.28 Total: -3.32 kcal Atomic # 14 Polarization: -1.38 SS G_CDS: -5.32 Total: -6.70 kcal Total LS contribution 5.35 Total: 5.35 kcal Total: -7.65 -11.22 -18.86 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14797354_10803936.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 94.524 kcal (2) G-P(sol) polarization free energy of solvation -7.648 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 86.876 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.215 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.863 kcal (6) G-S(sol) free energy of system = (1) + (5) 75.661 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds