Wall clock time and date at job start Sun Mar 7 2021 03:48:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.34780 * 120.00190 * 2 1 4 4 O 1.21565 * 119.99915 * 184.19911 * 3 2 1 5 5 C 1.47691 * 119.99759 * 4.20474 * 3 2 1 6 6 C 1.39820 * 120.16843 * 130.87435 * 5 3 2 7 7 F 1.35102 * 120.10737 * 0.04274 * 6 5 3 8 8 C 1.38325 * 119.78006 * 180.02562 * 6 5 3 9 9 C 1.38198 * 120.11748 * 0.02562 * 8 6 5 10 10 C 1.38457 * 120.34054 * 359.74567 * 9 8 6 11 11 C 1.50698 * 119.89651 * 180.25731 * 10 9 8 12 12 O 1.42900 * 109.47389 * 245.25471 * 11 10 9 13 13 Si 1.86308 * 109.46631 * 5.25088 * 11 10 9 14 14 C 1.37859 * 120.21605 * 0.50936 * 10 9 8 15 15 C 1.46496 * 120.00003 * 180.02562 * 2 1 3 16 16 H 1.09003 * 112.84939 * 191.19524 * 15 2 1 17 17 C 1.53785 * 113.61278 * 322.49992 * 15 2 1 18 18 C 1.53776 * 87.08181 * 89.11702 * 17 15 2 19 19 H 1.09000 * 113.69516 * 270.87396 * 18 17 15 20 20 C 1.50705 * 113.61412 * 139.97946 * 18 17 15 21 21 C 1.38234 * 119.99951 * 322.23290 * 20 18 17 22 22 C 1.38240 * 119.99966 * 179.76194 * 21 20 18 23 23 C 1.38231 * 119.99704 * 0.51100 * 22 21 20 24 24 C 1.38238 * 120.00120 * 359.73886 * 23 22 21 25 25 C 1.38227 * 119.99915 * 142.50139 * 20 18 17 26 26 C 1.53781 * 87.08227 * 25.43563 * 18 17 15 27 27 H 1.09004 * 109.47147 * 95.46127 * 1 2 3 28 28 H 1.08995 * 109.47616 * 215.45884 * 1 2 3 29 29 H 1.09003 * 109.47228 * 335.46227 * 1 2 3 30 30 H 1.07996 * 119.94054 * 180.02562 * 8 6 5 31 31 H 1.08001 * 119.83152 * 180.02562 * 9 8 6 32 32 H 1.08999 * 109.47482 * 125.24763 * 11 10 9 33 33 H 0.96698 * 114.00118 * 179.97438 * 12 11 10 34 34 H 1.48496 * 110.00191 * 300.00064 * 13 11 10 35 35 H 1.48502 * 109.99760 * 61.32170 * 13 11 10 36 36 H 1.08005 * 120.06052 * 179.76943 * 14 10 9 37 37 H 1.09004 * 113.61270 * 203.67217 * 17 15 2 38 38 H 1.08999 * 113.61237 * 334.56799 * 17 15 2 39 39 H 1.08003 * 120.00063 * 359.97438 * 21 20 18 40 40 H 1.07997 * 119.99740 * 180.22837 * 22 21 20 41 41 H 1.08005 * 120.00180 * 179.72439 * 23 22 21 42 42 H 1.08004 * 120.00068 * 179.97438 * 24 23 22 43 43 H 1.07999 * 120.00141 * 0.02562 * 25 20 18 44 44 H 1.08997 * 113.61597 * 220.01838 * 26 18 17 45 45 H 1.09002 * 113.61735 * 89.10999 * 26 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3521 1.1686 -0.0771 5 6 1.4034 2.4445 0.0938 6 6 1.7957 3.4148 1.0210 7 9 2.8502 3.1877 1.8345 8 6 1.1008 4.6080 1.1023 9 6 0.0220 4.8404 0.2704 10 6 -0.3678 3.8850 -0.6528 11 6 -1.5420 4.1512 -1.5591 12 8 -2.5956 3.2349 -1.2553 13 14 -2.1426 5.8958 -1.3008 14 6 0.3116 2.6887 -0.7422 15 6 2.1974 -1.2687 -0.0006 16 1 3.2624 -1.1426 0.1945 17 6 1.5373 -2.3615 0.8567 18 6 0.7440 -2.7577 -0.3996 19 1 -0.1987 -2.2217 -0.5095 20 6 0.5941 -4.2471 -0.5742 21 6 1.6393 -5.0901 -0.2458 22 6 1.5001 -6.4566 -0.4013 23 6 0.3195 -6.9793 -0.8951 24 6 -0.7239 -6.1359 -1.2283 25 6 -0.5865 -4.7697 -1.0678 26 6 1.8953 -2.1541 -1.2211 27 1 -0.3634 -0.0978 -1.0230 28 1 -0.3634 -0.8370 0.5961 29 1 -0.3634 0.9349 0.4268 30 1 1.4018 5.3594 1.8173 31 1 -0.5170 5.7738 0.3375 32 1 -1.2363 4.0221 -2.5973 33 1 -3.3855 3.3487 -1.8013 34 1 -2.5624 6.0847 0.1110 35 1 -1.0662 6.8595 -1.6440 36 1 0.0031 1.9437 -1.4607 37 1 2.2321 -3.1302 1.1950 38 1 0.9146 -1.9690 1.6606 39 1 2.5634 -4.6814 0.1355 40 1 2.3153 -7.1155 -0.1413 41 1 0.2122 -8.0466 -1.0208 42 1 -1.6461 -6.5442 -1.6145 43 1 -1.4013 -4.1108 -1.3289 44 1 1.5616 -1.5941 -2.0947 45 1 2.6880 -2.8661 -1.4509 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14797354_12335834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:48:23 Heat of formation + Delta-G solvation = -4.844031 kcal Electronic energy + Delta-G solvation = -29471.356019 eV Core-core repulsion = 25336.594998 eV Total energy + Delta-G solvation = -4134.761021 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.142 amu Computer time = 2.42 seconds Orbital eigenvalues (eV) -50.25123 -42.15467 -40.92721 -39.94228 -38.85492 -37.43066 -35.70774 -32.96769 -32.55511 -31.86686 -31.52403 -28.57404 -26.82402 -26.64515 -26.50319 -24.93975 -23.76085 -23.27254 -22.18389 -21.11400 -19.82663 -19.02232 -18.71898 -18.38082 -17.97045 -17.85451 -17.44620 -16.94151 -16.60086 -16.31113 -16.24940 -16.07732 -15.60129 -15.46387 -15.09996 -15.02169 -14.68936 -14.46496 -14.24815 -14.17855 -14.07067 -14.01907 -13.93889 -13.71335 -13.37685 -13.07767 -13.02042 -12.73364 -12.62717 -12.44548 -12.13652 -11.98794 -11.77073 -11.68232 -11.25294 -11.20613 -10.41470 -10.32889 -9.98124 -9.85444 -9.79863 -9.53710 -4.90243 -0.57092 -0.19146 0.43737 0.51293 1.24327 1.32238 1.62729 1.69652 1.98704 2.16528 2.83799 2.83939 3.06845 3.23722 3.37566 3.44680 3.61117 3.64405 3.67759 3.85913 3.91567 4.00924 4.04246 4.08019 4.16133 4.20234 4.25247 4.31294 4.44330 4.52344 4.53772 4.57586 4.62779 4.65541 4.67672 4.70029 4.74755 4.75022 4.80414 4.89712 4.94710 4.99017 5.12260 5.14153 5.18511 5.40185 5.47232 5.59798 5.65560 5.74836 6.04844 6.13653 6.78715 6.94927 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.055 3.945 2 N -0.581 5.581 3 C 0.559 3.441 4 O -0.569 6.569 5 C -0.173 4.173 6 C 0.125 3.875 7 F -0.140 7.140 8 C -0.147 4.147 9 C -0.079 4.079 10 C -0.094 4.094 11 C -0.072 4.072 12 O -0.557 6.557 13 Si 0.766 3.234 14 C -0.024 4.024 15 C 0.108 3.892 16 H 0.086 0.914 17 C -0.134 4.134 18 C -0.067 4.067 19 H 0.119 0.881 20 C -0.079 4.079 21 C -0.129 4.129 22 C -0.131 4.131 23 C -0.138 4.138 24 C -0.130 4.130 25 C -0.125 4.125 26 C -0.131 4.131 27 H 0.086 0.914 28 H 0.095 0.905 29 H 0.080 0.920 30 H 0.164 0.836 31 H 0.142 0.858 32 H 0.103 0.897 33 H 0.407 0.593 34 H -0.289 1.289 35 H -0.290 1.290 36 H 0.165 0.835 37 H 0.103 0.897 38 H 0.080 0.920 39 H 0.129 0.871 40 H 0.131 0.869 41 H 0.132 0.868 42 H 0.135 0.865 43 H 0.137 0.863 44 H 0.075 0.925 45 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.644 0.310 -4.017 10.452 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 N -0.311 5.311 3 C 0.347 3.653 4 O -0.449 6.449 5 C -0.177 4.177 6 C 0.105 3.895 7 F -0.118 7.118 8 C -0.165 4.165 9 C -0.096 4.096 10 C -0.094 4.094 11 C -0.182 4.182 12 O -0.368 6.368 13 Si 0.672 3.328 14 C -0.043 4.043 15 C 0.004 3.996 16 H 0.105 0.895 17 C -0.171 4.171 18 C -0.085 4.085 19 H 0.137 0.863 20 C -0.079 4.079 21 C -0.146 4.146 22 C -0.149 4.149 23 C -0.156 4.156 24 C -0.147 4.147 25 C -0.143 4.143 26 C -0.169 4.169 27 H 0.104 0.896 28 H 0.113 0.887 29 H 0.099 0.901 30 H 0.182 0.818 31 H 0.159 0.841 32 H 0.121 0.879 33 H 0.259 0.741 34 H -0.216 1.216 35 H -0.217 1.217 36 H 0.182 0.818 37 H 0.122 0.878 38 H 0.099 0.901 39 H 0.147 0.853 40 H 0.149 0.851 41 H 0.150 0.850 42 H 0.153 0.847 43 H 0.155 0.845 44 H 0.094 0.906 45 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -8.450 0.813 -3.170 9.062 hybrid contribution 1.152 -0.406 0.494 1.318 sum -7.298 0.406 -2.677 7.784 Atomic orbital electron populations 1.22490 0.77084 1.04849 1.04149 1.47463 1.08230 1.04178 1.71272 1.18344 0.86504 0.84282 0.76125 1.90808 1.15331 1.87671 1.51065 1.19980 1.00632 0.95282 1.01795 1.17953 0.85978 0.94926 0.90632 1.91534 1.54656 1.94911 1.70721 1.21241 0.96688 0.96125 1.02496 1.21175 0.95610 0.99275 0.93569 1.19729 0.97851 0.94152 0.97695 1.24687 0.87873 1.05860 0.99814 1.86414 1.27466 1.57885 1.64999 0.94117 0.85041 0.72445 0.81229 1.21262 0.89835 0.97014 0.96159 1.22030 0.96619 0.82271 0.98636 0.89543 1.23467 0.99670 0.97119 0.96883 1.21788 0.99272 0.91288 0.96163 0.86322 1.19847 0.94076 0.95146 0.98828 1.21221 0.99196 0.93557 1.00671 1.21411 0.98322 0.95662 0.99530 1.21449 0.93874 1.00741 0.99507 1.21453 0.99540 0.93894 0.99860 1.21328 0.97736 0.95647 0.99589 1.23397 0.98626 0.98034 0.96836 0.89587 0.88689 0.90113 0.81817 0.84068 0.87938 0.74109 1.21647 1.21721 0.81780 0.87849 0.90125 0.85333 0.85097 0.85045 0.84677 0.84494 0.90648 0.88664 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.22 7.36 127.77 0.94 0.72 16 2 N -0.58 -1.89 3.08 -823.23 -2.54 -4.43 16 3 C 0.56 5.79 7.01 86.74 0.61 6.40 16 4 O -0.57 -10.99 16.16 -3.92 -0.06 -11.05 16 5 C -0.17 -1.18 4.90 -20.05 -0.10 -1.28 16 6 C 0.13 1.08 7.26 22.67 0.16 1.24 16 7 F -0.14 -1.92 16.51 44.97 0.74 -1.18 16 8 C -0.15 -0.49 10.01 22.28 0.22 -0.27 16 9 C -0.08 -0.09 8.66 22.31 0.19 0.10 16 10 C -0.09 0.03 5.38 -19.90 -0.11 -0.07 16 11 C -0.07 0.48 2.79 71.24 0.20 0.68 16 12 O -0.56 4.33 12.81 -148.98 -1.91 2.42 16 13 Si 0.77 -5.21 29.85 68.60 2.05 -3.16 16 14 C -0.02 -0.02 7.19 22.52 0.16 0.15 16 15 C 0.11 0.29 4.44 45.52 0.20 0.49 16 16 H 0.09 0.67 7.26 -2.39 -0.02 0.66 16 17 C -0.13 0.18 6.67 31.12 0.21 0.39 16 18 C -0.07 0.19 3.32 -11.01 -0.04 0.15 16 19 H 0.12 -0.69 5.54 -2.39 -0.01 -0.71 16 20 C -0.08 -0.01 5.29 -19.87 -0.11 -0.11 16 21 C -0.13 -0.14 8.60 22.27 0.19 0.06 16 22 C -0.13 -0.19 10.05 22.27 0.22 0.03 16 23 C -0.14 -0.17 10.05 22.27 0.22 0.06 16 24 C -0.13 -0.06 10.05 22.27 0.22 0.16 16 25 C -0.13 0.02 9.71 22.27 0.22 0.24 16 26 C -0.13 0.07 7.21 31.12 0.22 0.29 16 27 H 0.09 -0.67 7.58 -2.38 -0.02 -0.69 16 28 H 0.09 -0.61 5.18 -2.39 -0.01 -0.62 16 29 H 0.08 -0.24 5.51 -2.39 -0.01 -0.25 16 30 H 0.16 -0.13 8.06 -2.91 -0.02 -0.15 16 31 H 0.14 -0.15 4.84 -2.91 -0.01 -0.16 16 32 H 0.10 -1.11 7.96 -2.39 -0.02 -1.12 16 33 H 0.41 -7.14 8.74 -74.06 -0.65 -7.78 16 34 H -0.29 -0.01 7.04 99.48 0.70 0.69 16 35 H -0.29 0.15 7.11 99.48 0.71 0.86 16 36 H 0.16 -0.64 6.65 -2.91 -0.02 -0.66 16 37 H 0.10 -0.19 6.32 -2.39 -0.02 -0.21 16 38 H 0.08 -0.14 7.28 -2.39 -0.02 -0.16 16 39 H 0.13 -0.16 6.68 -2.91 -0.02 -0.18 16 40 H 0.13 -0.19 8.06 -2.91 -0.02 -0.21 16 41 H 0.13 -0.25 8.06 -2.91 -0.02 -0.27 16 42 H 0.14 -0.42 8.06 -2.91 -0.02 -0.44 16 43 H 0.14 -0.58 8.05 -2.91 -0.02 -0.61 16 44 H 0.07 -0.03 8.14 -2.39 -0.02 -0.05 16 45 H 0.09 -0.02 7.71 -2.39 -0.02 -0.03 16 Total: 0.00 -22.63 364.19 2.56 -20.06 By element: Atomic # 1 Polarization: -12.52 SS G_CDS: 0.43 Total: -12.09 kcal Atomic # 6 Polarization: 5.57 SS G_CDS: 3.86 Total: 9.42 kcal Atomic # 7 Polarization: -1.89 SS G_CDS: -2.54 Total: -4.43 kcal Atomic # 8 Polarization: -6.66 SS G_CDS: -1.97 Total: -8.63 kcal Atomic # 9 Polarization: -1.92 SS G_CDS: 0.74 Total: -1.18 kcal Atomic # 14 Polarization: -5.21 SS G_CDS: 2.05 Total: -3.16 kcal Total: -22.63 2.56 -20.06 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14797354_12335834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.220 kcal (2) G-P(sol) polarization free energy of solvation -22.626 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.406 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.562 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.064 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.844 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.42 seconds