Wall clock time and date at job start Sun Mar 7 2021 03:49:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.34775 * 119.99996 * 2 1 4 4 O 1.21567 * 120.00142 * 185.49167 * 3 2 1 5 5 C 1.47697 * 119.99753 * 5.49322 * 3 2 1 6 6 C 1.39805 * 120.15613 * 201.83500 * 5 3 2 7 7 F 1.35106 * 120.08253 * 359.97438 * 6 5 3 8 8 C 1.38314 * 119.83199 * 179.76316 * 6 5 3 9 9 C 1.38186 * 120.14807 * 0.49741 * 8 6 5 10 10 C 1.50697 * 119.84483 * 179.74041 * 9 8 6 11 11 O 1.42906 * 109.46866 * 255.01940 * 10 9 8 12 12 Si 1.86292 * 109.47206 * 15.01726 * 10 9 8 13 13 C 1.38659 * 120.31059 * 359.75982 * 9 8 6 14 14 F 1.35101 * 119.91698 * 179.97438 * 13 9 8 15 15 C 1.38068 * 120.16845 * 359.97438 * 13 9 8 16 16 C 1.46503 * 120.00135 * 180.02562 * 2 1 3 17 17 H 1.08994 * 112.85051 * 168.80795 * 16 2 1 18 18 C 1.53788 * 113.61225 * 299.99861 * 16 2 1 19 19 C 1.53780 * 87.07795 * 89.20076 * 18 16 2 20 20 H 1.08997 * 113.61530 * 270.79672 * 19 18 16 21 21 C 1.50705 * 113.60933 * 139.98461 * 19 18 16 22 22 C 1.38234 * 120.00183 * 121.53170 * 21 19 18 23 23 C 1.38236 * 119.99828 * 180.25324 * 22 21 19 24 24 C 1.38227 * 119.99976 * 359.50669 * 23 22 21 25 25 C 1.38232 * 120.00269 * 0.46865 * 24 23 22 26 26 C 1.38233 * 119.99875 * 359.76270 * 25 24 23 27 27 C 1.53773 * 87.17439 * 25.39101 * 19 18 16 28 28 H 1.08999 * 109.47312 * 264.00526 * 1 2 3 29 29 H 1.08996 * 109.47386 * 24.01055 * 1 2 3 30 30 H 1.09003 * 109.47172 * 144.00780 * 1 2 3 31 31 H 1.08001 * 119.92799 * 180.25457 * 8 6 5 32 32 H 1.09003 * 109.46951 * 135.02118 * 10 9 8 33 33 H 0.96694 * 113.99754 * 60.00238 * 11 10 9 34 34 H 1.48496 * 110.00487 * 180.02562 * 12 10 9 35 35 H 1.48496 * 110.00451 * 301.32204 * 12 10 9 36 36 H 1.08001 * 120.07854 * 180.02562 * 15 13 9 37 37 H 1.09001 * 113.61250 * 334.65580 * 18 16 2 38 38 H 1.08998 * 113.68982 * 203.76390 * 18 16 2 39 39 H 1.07999 * 119.99856 * 359.97100 * 22 21 19 40 40 H 1.08006 * 119.99720 * 179.72393 * 23 22 21 41 41 H 1.08006 * 120.00056 * 180.25871 * 24 23 22 42 42 H 1.07998 * 120.00612 * 179.79071 * 25 24 23 43 43 H 1.07998 * 120.00450 * 179.97438 * 26 25 24 44 44 H 1.09002 * 113.61865 * 89.15536 * 27 19 18 45 45 H 1.09001 * 113.61301 * 220.05924 * 27 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3503 1.1696 -0.1008 5 6 1.4054 2.4433 0.1224 6 6 1.9889 3.6340 -0.3206 7 9 3.2266 3.6212 -0.8620 8 6 1.2940 4.8246 -0.2072 9 6 0.0304 4.8401 0.3518 10 6 -0.7182 6.1420 0.4774 11 8 -0.6997 6.5725 1.8399 12 14 0.0955 7.4318 -0.5925 13 6 -0.5519 3.6635 0.7981 14 9 -1.7876 3.6879 1.3438 15 6 0.1278 2.4670 0.6862 16 6 2.1975 -1.2687 -0.0006 17 1 3.2624 -1.1425 -0.1955 18 6 1.8954 -2.1550 1.2194 19 6 0.7455 -2.7596 0.3966 20 1 -0.1979 -2.2248 0.5059 21 6 0.5973 -4.2493 0.5703 22 6 -0.5942 -4.7760 1.0328 23 6 -0.7283 -6.1420 1.1972 24 6 0.3254 -6.9820 0.8893 25 6 1.5167 -6.4553 0.4263 26 6 1.6525 -5.0890 0.2665 27 6 1.5371 -2.3618 -0.8603 28 1 -0.3634 -0.1073 1.0220 29 1 -0.3634 0.9387 -0.4181 30 1 -0.3634 -0.8315 -0.6039 31 1 1.7417 5.7447 -0.5527 32 1 -1.7498 6.0004 0.1550 33 1 0.1881 6.7185 2.1942 34 1 -0.6329 8.7207 -0.4771 35 1 1.5118 7.6112 -0.1837 36 1 -0.3272 1.5513 1.0339 37 1 1.5602 -1.5959 2.0930 38 1 2.6880 -2.8666 1.4508 39 1 -1.4186 -4.1200 1.2701 40 1 -1.6577 -6.5532 1.5628 41 1 0.2192 -8.0496 1.0138 42 1 2.3411 -7.1113 0.1890 43 1 2.5833 -4.6774 -0.0948 44 1 2.2323 -3.1296 -1.1998 45 1 0.9131 -1.9694 -1.6633 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14797354_12360598.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:49:35 Heat of formation + Delta-G solvation = -28.562463 kcal Electronic energy + Delta-G solvation = -31854.345514 eV Core-core repulsion = 27249.102009 eV Total energy + Delta-G solvation = -4605.243505 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.132 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -50.15214 -50.09095 -42.17689 -40.84569 -39.89816 -38.84103 -37.83037 -35.85370 -33.31550 -31.88612 -31.59059 -31.43502 -28.71871 -28.00705 -26.75256 -25.80884 -24.45386 -23.92298 -23.42630 -22.39424 -21.47200 -19.97006 -19.26956 -19.00480 -18.54444 -18.13233 -17.76194 -17.42020 -17.25234 -16.90146 -16.67106 -16.44552 -16.24745 -16.10500 -15.98692 -15.91196 -15.59666 -15.34903 -15.00258 -14.92295 -14.42732 -14.28093 -14.23744 -14.07414 -13.94168 -13.82891 -13.57331 -13.27416 -13.14582 -12.90156 -12.71941 -12.62885 -12.27842 -12.10737 -11.93537 -11.74099 -11.65780 -11.21333 -11.13371 -10.78783 -10.46663 -9.95129 -9.79918 -9.73700 -9.51846 -4.96784 -0.81207 -0.32730 0.45017 0.52337 1.15745 1.32304 1.53942 1.61404 1.91115 2.12069 2.77267 2.80405 2.85231 3.05058 3.24245 3.29920 3.45400 3.47240 3.65420 3.70703 3.73131 3.95156 3.99089 4.05296 4.17110 4.19824 4.26795 4.30999 4.32893 4.38236 4.43641 4.48806 4.57837 4.60752 4.67988 4.68243 4.70333 4.74081 4.75512 4.83507 4.92018 4.98748 5.15226 5.15920 5.19707 5.36992 5.50031 5.60926 5.66758 5.76387 6.08459 6.14848 6.37708 6.83452 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 N -0.581 5.581 3 C 0.557 3.443 4 O -0.563 6.563 5 C -0.147 4.147 6 C 0.138 3.862 7 F -0.127 7.127 8 C -0.130 4.130 9 C -0.090 4.090 10 C -0.086 4.086 11 O -0.540 6.540 12 Si 0.773 3.227 13 C 0.105 3.895 14 F -0.125 7.125 15 C -0.099 4.099 16 C 0.111 3.889 17 H 0.089 0.911 18 C -0.134 4.134 19 C -0.069 4.069 20 H 0.121 0.879 21 C -0.078 4.078 22 C -0.126 4.126 23 C -0.131 4.131 24 C -0.139 4.139 25 C -0.132 4.132 26 C -0.128 4.128 27 C -0.132 4.132 28 H 0.090 0.910 29 H 0.099 0.901 30 H 0.100 0.900 31 H 0.171 0.829 32 H 0.135 0.865 33 H 0.390 0.610 34 H -0.294 1.294 35 H -0.273 1.273 36 H 0.197 0.803 37 H 0.074 0.926 38 H 0.094 0.906 39 H 0.137 0.863 40 H 0.133 0.867 41 H 0.130 0.870 42 H 0.130 0.870 43 H 0.130 0.870 44 H 0.101 0.899 45 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.102 -1.828 -1.924 5.751 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.106 4.106 2 N -0.312 5.312 3 C 0.346 3.654 4 O -0.443 6.443 5 C -0.151 4.151 6 C 0.118 3.882 7 F -0.106 7.106 8 C -0.149 4.149 9 C -0.092 4.092 10 C -0.195 4.195 11 O -0.348 6.348 12 Si 0.677 3.323 13 C 0.085 3.915 14 F -0.104 7.104 15 C -0.117 4.117 16 C 0.007 3.993 17 H 0.107 0.893 18 C -0.172 4.172 19 C -0.087 4.087 20 H 0.139 0.861 21 C -0.078 4.078 22 C -0.144 4.144 23 C -0.149 4.149 24 C -0.157 4.157 25 C -0.150 4.150 26 C -0.146 4.146 27 C -0.170 4.170 28 H 0.109 0.891 29 H 0.117 0.883 30 H 0.118 0.882 31 H 0.188 0.812 32 H 0.153 0.847 33 H 0.239 0.761 34 H -0.221 1.221 35 H -0.199 1.199 36 H 0.214 0.786 37 H 0.093 0.907 38 H 0.112 0.888 39 H 0.155 0.845 40 H 0.151 0.849 41 H 0.148 0.852 42 H 0.148 0.852 43 H 0.148 0.852 44 H 0.119 0.881 45 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -4.719 -1.139 -2.072 5.278 hybrid contribution 0.701 -0.221 1.238 1.440 sum -4.017 -1.360 -0.834 4.323 Atomic orbital electron populations 1.23047 0.77587 1.05915 1.04045 1.47377 1.08074 1.04235 1.71509 1.18198 0.86551 0.84023 0.76635 1.90846 1.15205 1.87416 1.50800 1.19730 0.96288 0.92700 1.06389 1.17781 0.80776 0.93596 0.96086 1.91593 1.39101 1.97153 1.82709 1.21083 0.94161 0.97936 1.01676 1.20461 0.94474 0.96211 0.98067 1.25309 1.07256 0.97026 0.89881 1.86654 1.34791 1.88242 1.25139 0.93865 0.75941 0.75563 0.86952 1.17350 0.81992 0.93477 0.98665 1.91575 1.38666 1.97145 1.82990 1.22271 0.92195 0.99849 0.97389 1.22036 0.96844 0.82179 0.98241 0.89254 1.23424 0.98686 0.98154 0.96951 1.21821 0.99399 0.91083 0.96393 0.86142 1.19872 0.93837 0.95344 0.98788 1.21336 0.97774 0.95549 0.99703 1.21444 0.99490 0.94036 0.99898 1.21436 0.93811 1.00687 0.99734 1.21411 0.98216 0.95755 0.99588 1.21223 0.99241 0.93506 1.00598 1.23479 0.99612 0.97112 0.96813 0.89145 0.88256 0.88188 0.81211 0.84743 0.76071 1.22121 1.19949 0.78638 0.90685 0.88791 0.84476 0.84863 0.85203 0.85157 0.85220 0.88076 0.89691 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.32 6.92 127.77 0.88 0.57 16 2 N -0.58 0.64 3.08 -822.90 -2.54 -1.90 16 3 C 0.56 3.17 7.49 86.74 0.65 3.82 16 4 O -0.56 -8.37 15.12 -3.93 -0.06 -8.43 16 5 C -0.15 -0.23 5.56 -20.06 -0.11 -0.34 16 6 C 0.14 0.42 7.25 22.67 0.16 0.59 16 7 F -0.13 -1.15 15.79 44.97 0.71 -0.44 16 8 C -0.13 0.29 8.62 22.28 0.19 0.48 16 9 C -0.09 0.28 5.27 -19.78 -0.10 0.18 16 10 C -0.09 0.32 2.44 71.24 0.17 0.49 16 11 O -0.54 0.06 12.88 -148.98 -1.92 -1.86 16 12 Si 0.77 -3.94 30.23 68.60 2.07 -1.87 16 13 C 0.10 -0.26 7.23 22.33 0.16 -0.09 16 14 F -0.13 0.03 16.73 44.97 0.75 0.78 16 15 C -0.10 0.39 7.53 22.57 0.17 0.56 16 16 C 0.11 -0.08 4.48 45.58 0.20 0.13 16 17 H 0.09 0.40 7.21 -2.39 -0.02 0.38 16 18 C -0.13 0.39 7.21 31.12 0.22 0.62 16 19 C -0.07 0.36 3.32 -11.02 -0.04 0.32 16 20 H 0.12 -1.07 5.54 -2.39 -0.01 -1.08 16 21 C -0.08 0.11 5.29 -19.86 -0.11 0.01 16 22 C -0.13 0.16 9.71 22.27 0.22 0.38 16 23 C -0.13 0.02 10.05 22.27 0.22 0.24 16 24 C -0.14 -0.09 10.05 22.27 0.22 0.13 16 25 C -0.13 -0.08 10.05 22.27 0.22 0.14 16 26 C -0.13 0.03 8.54 22.27 0.19 0.22 16 27 C -0.13 0.57 6.69 31.18 0.21 0.78 16 28 H 0.09 -1.17 7.06 -2.39 -0.02 -1.18 16 29 H 0.10 -1.04 4.99 -2.39 -0.01 -1.05 16 30 H 0.10 -1.16 5.21 -2.39 -0.01 -1.17 16 31 H 0.17 -0.90 4.83 -2.91 -0.01 -0.91 16 32 H 0.13 -0.69 7.89 -2.39 -0.02 -0.71 16 33 H 0.39 -2.38 8.70 -74.06 -0.64 -3.03 16 34 H -0.29 -0.76 7.11 99.48 0.71 -0.05 16 35 H -0.27 0.54 6.68 99.48 0.66 1.21 16 36 H 0.20 -1.82 4.20 -2.91 -0.01 -1.83 16 37 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 38 H 0.09 -0.20 7.64 -2.39 -0.02 -0.22 16 39 H 0.14 -0.75 8.05 -2.91 -0.02 -0.77 16 40 H 0.13 -0.45 8.06 -2.91 -0.02 -0.48 16 41 H 0.13 -0.29 8.06 -2.91 -0.02 -0.31 16 42 H 0.13 -0.28 8.06 -2.91 -0.02 -0.31 16 43 H 0.13 -0.35 6.73 -2.91 -0.02 -0.37 16 44 H 0.10 -0.43 6.39 -2.39 -0.02 -0.44 16 45 H 0.08 -0.46 7.27 -2.39 -0.02 -0.47 16 Total: 0.00 -20.70 365.36 3.20 -17.50 By element: Atomic # 1 Polarization: -13.43 SS G_CDS: 0.43 Total: -13.01 kcal Atomic # 6 Polarization: 5.48 SS G_CDS: 3.75 Total: 9.23 kcal Atomic # 7 Polarization: 0.64 SS G_CDS: -2.54 Total: -1.90 kcal Atomic # 8 Polarization: -8.31 SS G_CDS: -1.98 Total: -10.29 kcal Atomic # 9 Polarization: -1.13 SS G_CDS: 1.46 Total: 0.34 kcal Atomic # 14 Polarization: -3.94 SS G_CDS: 2.07 Total: -1.87 kcal Total: -20.70 3.20 -17.50 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14797354_12360598.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.063 kcal (2) G-P(sol) polarization free energy of solvation -20.700 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.763 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.200 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.500 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.562 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds