Wall clock time and date at job start Sun Mar 7 2021 03:50:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.39285 * 121.03188 * 2 1 4 4 C 1.46493 * 134.20239 * 0.02562 * 3 2 1 5 5 C 1.50704 * 126.60080 * 359.97438 * 4 3 2 6 6 O 1.42904 * 109.46844 * 74.99873 * 5 4 3 7 7 Si 1.86298 * 109.47105 * 194.99930 * 5 4 3 8 8 C 1.34179 * 106.80428 * 180.02562 * 4 3 2 9 9 N 1.36953 * 109.94909 * 0.02562 * 8 4 3 10 10 C 1.37148 * 110.11494 * 359.97438 * 9 8 4 11 11 N 1.32817 * 132.96556 * 180.02562 * 10 9 8 12 12 C 1.31314 * 121.89323 * 179.72972 * 11 10 9 13 13 C 1.39746 * 121.03000 * 180.02562 * 2 1 3 14 14 C 1.47665 * 120.45483 * 359.97438 * 13 2 1 15 15 O 1.21571 * 120.00408 * 310.61256 * 14 13 2 16 16 N 1.34785 * 119.99708 * 130.60635 * 14 13 2 17 17 C 1.46499 * 120.00000 * 4.50851 * 16 14 13 18 18 C 1.46494 * 119.99743 * 184.50760 * 16 14 13 19 19 H 1.09004 * 112.91446 * 16.09235 * 18 16 14 20 20 C 1.53785 * 113.61460 * 147.34276 * 18 16 14 21 21 C 1.53780 * 87.07906 * 89.11582 * 20 18 16 22 22 H 1.09000 * 113.61688 * 270.88136 * 21 20 18 23 23 C 1.50707 * 113.69140 * 139.99429 * 21 20 18 24 24 C 1.38231 * 119.99798 * 322.18821 * 23 21 20 25 25 C 1.38228 * 119.99980 * 179.74257 * 24 23 21 26 26 C 1.38236 * 119.99986 * 0.55503 * 25 24 23 27 27 C 1.38235 * 119.99923 * 359.69813 * 26 25 24 28 28 C 1.38230 * 119.99742 * 0.02562 * 27 26 25 29 29 C 1.53782 * 113.61577 * 244.84327 * 18 16 14 30 30 H 1.09007 * 109.47261 * 275.66342 * 1 2 3 31 31 H 1.08998 * 109.47271 * 35.66239 * 1 2 3 32 32 H 1.08999 * 109.47494 * 155.66688 * 1 2 3 33 33 H 1.08998 * 109.46882 * 314.99888 * 5 4 3 34 34 H 0.96696 * 113.99826 * 180.02562 * 6 5 4 35 35 H 1.48500 * 109.99879 * 299.99766 * 7 5 4 36 36 H 1.48495 * 110.00067 * 61.32227 * 7 5 4 37 37 H 1.08000 * 125.02548 * 180.02562 * 8 4 3 38 38 H 0.96999 * 124.94258 * 180.02562 * 9 8 4 39 39 H 1.08004 * 119.30982 * 180.28076 * 12 11 10 40 40 H 1.09005 * 109.46957 * 215.59421 * 17 16 14 41 41 H 1.08995 * 109.47039 * 335.59435 * 17 16 14 42 42 H 1.08993 * 109.47379 * 95.59474 * 17 16 14 43 43 H 1.09002 * 113.61744 * 203.66059 * 20 18 16 44 44 H 1.08994 * 113.61659 * 334.56847 * 20 18 16 45 45 H 1.08002 * 120.00239 * 0.02562 * 24 23 21 46 46 H 1.08003 * 120.00379 * 180.27505 * 25 24 23 47 47 H 1.08003 * 120.00352 * 179.72376 * 26 25 24 48 48 H 1.07996 * 120.00201 * 179.97438 * 27 26 25 49 49 H 1.08007 * 120.00235 * 179.97438 * 28 27 26 50 50 H 1.08995 * 113.61593 * 25.42546 * 29 18 16 51 51 H 1.08997 * 113.61974 * 156.25633 * 29 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2250 1.1935 0.0000 4 6 1.8516 2.6101 0.0005 5 6 0.4527 3.1706 0.0006 6 8 -0.1192 3.0236 1.3019 7 14 0.5073 4.9766 -0.4534 8 6 2.9948 3.3125 -0.0004 9 7 4.0669 2.4603 -0.0019 10 6 3.6348 1.1587 -0.0015 11 7 4.2720 -0.0066 -0.0021 12 6 3.6266 -1.1502 0.0037 13 6 2.2273 -1.1975 -0.0005 14 6 1.5224 -2.4950 -0.0005 15 8 0.6303 -2.7022 0.7990 16 7 1.8679 -3.4496 -0.8871 17 6 3.0066 -3.2385 -1.7843 18 6 1.1048 -4.6983 -0.9535 19 1 0.1382 -4.6320 -0.4541 20 6 1.0277 -5.2988 -2.3671 21 6 2.3282 -6.0490 -2.0341 22 1 3.2305 -5.4892 -2.2802 23 6 2.3594 -7.4649 -2.5493 24 6 1.2122 -8.2356 -2.5223 25 6 1.2394 -9.5326 -2.9997 26 6 2.4167 -10.0627 -3.4934 27 6 3.5653 -9.2938 -3.5156 28 6 3.5366 -7.9949 -3.0434 29 6 1.9197 -5.9403 -0.5555 30 1 -0.3634 0.1014 1.0227 31 1 -0.3634 0.8349 -0.5991 32 1 -0.3634 -0.9363 -0.4234 33 1 -0.1548 2.6314 -0.7263 34 1 -1.0215 3.3633 1.3757 35 1 1.3326 5.7227 0.5302 36 1 1.0706 5.1406 -1.8175 37 1 3.0599 4.3906 0.0001 38 1 4.9966 2.7371 -0.0024 39 1 4.1869 -2.0735 0.0076 40 1 2.7963 -3.6944 -2.7518 41 1 3.1728 -2.1692 -1.9149 42 1 3.8979 -3.6947 -1.3537 43 1 0.1708 -5.9557 -2.5165 44 1 1.1404 -4.5612 -3.1616 45 1 0.2934 -7.8229 -2.1325 46 1 0.3420 -10.1333 -2.9827 47 1 2.4392 -11.0775 -3.8623 48 1 4.4852 -9.7080 -3.9009 49 1 4.4340 -7.3942 -3.0603 50 1 2.7525 -5.7204 0.1124 51 1 1.3067 -6.7720 -0.2082 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14797354_12890568.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:50:31 Heat of formation + Delta-G solvation = 79.062904 kcal Electronic energy + Delta-G solvation = -34290.366832 eV Core-core repulsion = 29930.318923 eV Total energy + Delta-G solvation = -4360.047909 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.173 amu Computer time = 1.41 seconds Orbital eigenvalues (eV) -42.87689 -41.85301 -40.44708 -39.12857 -38.41533 -37.70269 -35.49208 -35.05810 -32.20974 -31.98216 -31.74658 -30.81636 -28.88792 -28.51696 -26.78801 -26.59048 -25.85683 -24.44369 -24.06472 -23.50495 -22.37247 -21.22936 -20.42115 -19.63242 -19.22691 -18.67945 -18.39155 -18.02975 -17.41726 -17.37832 -16.93376 -16.37641 -16.19569 -16.10486 -15.81246 -15.47565 -15.31854 -15.13924 -15.03506 -14.96688 -14.40409 -14.25606 -14.23086 -14.12756 -13.98128 -13.92696 -13.77699 -13.70021 -13.49045 -13.25702 -13.03280 -12.88243 -12.78604 -12.71515 -12.62748 -12.14705 -11.97148 -11.77223 -11.63690 -11.20304 -11.15548 -11.04512 -10.43431 -10.17148 -9.80631 -9.71276 -9.55153 -9.49567 -9.14026 -5.08877 -0.18326 0.00040 0.44927 0.51892 1.20765 1.31200 1.59070 1.60394 1.68929 1.87782 1.88556 2.73342 2.84910 3.25809 3.34090 3.40603 3.52481 3.58129 3.64242 3.67667 3.73327 3.79756 3.92771 3.97857 4.02891 4.04022 4.12063 4.12360 4.20290 4.26059 4.28814 4.30891 4.38251 4.55138 4.56400 4.62136 4.63281 4.69909 4.70552 4.72921 4.82127 4.83838 4.89420 4.98714 5.04122 5.11440 5.13656 5.15912 5.16502 5.30705 5.34315 5.57146 5.60099 5.65785 5.74880 5.75916 6.09359 6.11878 6.30630 6.65902 6.86538 7.15678 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C 0.072 3.928 3 C -0.142 4.142 4 C -0.135 4.135 5 C -0.039 4.039 6 O -0.543 6.543 7 Si 0.685 3.315 8 C 0.065 3.935 9 N -0.570 5.570 10 C 0.305 3.695 11 N -0.500 5.500 12 C 0.178 3.822 13 C -0.223 4.223 14 C 0.578 3.422 15 O -0.522 6.522 16 N -0.593 5.593 17 C 0.062 3.938 18 C 0.121 3.879 19 H 0.110 0.890 20 C -0.141 4.141 21 C -0.079 4.079 22 H 0.102 0.898 23 C -0.071 4.071 24 C -0.117 4.117 25 C -0.117 4.117 26 C -0.125 4.125 27 C -0.118 4.118 28 C -0.117 4.117 29 C -0.138 4.138 30 H 0.093 0.907 31 H 0.074 0.926 32 H 0.072 0.928 33 H 0.074 0.926 34 H 0.381 0.619 35 H -0.251 1.251 36 H -0.255 1.255 37 H 0.177 0.823 38 H 0.426 0.574 39 H 0.167 0.833 40 H 0.080 0.920 41 H 0.078 0.922 42 H 0.063 0.937 43 H 0.100 0.900 44 H 0.077 0.923 45 H 0.122 0.878 46 H 0.122 0.878 47 H 0.121 0.879 48 H 0.121 0.879 49 H 0.120 0.880 50 H 0.074 0.926 51 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.314 2.472 -4.219 5.063 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C 0.064 3.936 3 C -0.149 4.149 4 C -0.142 4.142 5 C -0.150 4.150 6 O -0.349 6.349 7 Si 0.586 3.414 8 C -0.061 4.061 9 N -0.175 5.175 10 C 0.072 3.928 11 N -0.213 5.213 12 C 0.010 3.990 13 C -0.230 4.230 14 C 0.365 3.635 15 O -0.398 6.398 16 N -0.326 5.326 17 C -0.080 4.080 18 C 0.017 3.983 19 H 0.128 0.872 20 C -0.179 4.179 21 C -0.097 4.097 22 H 0.120 0.880 23 C -0.071 4.071 24 C -0.135 4.135 25 C -0.135 4.135 26 C -0.143 4.143 27 C -0.136 4.136 28 C -0.135 4.135 29 C -0.177 4.177 30 H 0.112 0.888 31 H 0.092 0.908 32 H 0.091 0.909 33 H 0.092 0.908 34 H 0.228 0.772 35 H -0.176 1.176 36 H -0.179 1.179 37 H 0.194 0.806 38 H 0.264 0.736 39 H 0.184 0.816 40 H 0.098 0.902 41 H 0.097 0.903 42 H 0.081 0.919 43 H 0.118 0.882 44 H 0.096 0.904 45 H 0.140 0.860 46 H 0.140 0.860 47 H 0.139 0.861 48 H 0.139 0.861 49 H 0.138 0.862 50 H 0.093 0.907 51 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 0.335 2.956 -3.901 4.906 hybrid contribution 0.206 -0.487 -0.095 0.538 sum 0.541 2.469 -3.995 4.728 Atomic orbital electron populations 1.20933 0.89172 1.02980 1.04181 1.19718 0.96742 0.89138 0.88006 1.19366 0.92835 0.93228 1.09471 1.19525 0.93159 0.90635 1.10907 1.24065 0.91379 1.10724 0.88841 1.86555 1.33700 1.85839 1.28806 0.94970 0.90433 0.76194 0.79819 1.21615 0.85385 0.95589 1.03525 1.41444 1.09456 1.02724 1.63924 1.18452 0.89259 0.85847 0.99225 1.66488 1.40362 0.95886 1.18603 1.22641 0.89901 0.94553 0.91949 1.20379 0.95122 0.93477 1.14037 1.17931 0.82500 0.82808 0.80217 1.90815 1.31021 1.80289 1.37668 1.47414 1.31750 1.16470 1.36963 1.22188 0.88339 1.02931 0.94588 1.21921 0.96132 0.82711 0.97525 0.87219 1.23490 0.98207 0.99417 0.96748 1.21792 0.98985 0.92522 0.96421 0.88002 1.19703 0.93581 0.95273 0.98539 1.21017 0.98035 0.94237 1.00240 1.21177 0.98167 0.95566 0.98630 1.21196 0.93082 0.99977 1.00020 1.21179 0.98424 0.94386 0.99610 1.21063 0.97550 0.95710 0.99187 1.23464 1.00716 0.97970 0.95550 0.88846 0.90756 0.90901 0.90836 0.77201 1.17567 1.17896 0.80633 0.73559 0.81609 0.90184 0.90327 0.91868 0.88203 0.90422 0.85990 0.86033 0.86124 0.86078 0.86207 0.90701 0.88660 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.25 8.88 36.00 0.32 0.07 16 2 C 0.07 0.26 5.97 -103.67 -0.62 -0.36 16 3 C -0.14 -0.53 6.17 -105.13 -0.65 -1.18 16 4 C -0.13 -0.30 5.61 -102.73 -0.58 -0.87 16 5 C -0.04 0.02 2.22 36.01 0.08 0.10 16 6 O -0.54 0.01 12.86 -35.23 -0.45 -0.44 16 7 Si 0.69 -1.51 30.80 -169.99 -5.24 -6.74 16 8 C 0.07 0.06 10.44 -16.69 -0.17 -0.12 16 9 N -0.57 -0.62 6.04 -12.12 -0.07 -0.69 16 10 C 0.31 1.10 8.42 -155.72 -1.31 -0.21 16 11 N -0.50 -1.80 10.37 -11.96 -0.12 -1.93 16 12 C 0.18 0.38 8.72 -17.11 -0.15 0.23 16 13 C -0.22 -0.68 4.89 -104.82 -0.51 -1.19 16 14 C 0.58 1.91 6.36 -12.41 -0.08 1.83 16 15 O -0.52 -3.40 15.25 5.30 0.08 -3.32 16 16 N -0.59 -0.32 3.08 -174.18 -0.54 -0.85 16 17 C 0.06 -0.12 7.36 59.85 0.44 0.32 16 18 C 0.12 0.01 4.39 -67.12 -0.29 -0.29 16 19 H 0.11 0.16 7.35 -51.93 -0.38 -0.22 16 20 C -0.14 0.20 6.67 -25.92 -0.17 0.03 16 21 C -0.08 0.10 3.34 -90.95 -0.30 -0.21 16 22 H 0.10 -0.21 5.69 -51.93 -0.30 -0.50 16 23 C -0.07 -0.02 5.29 -104.62 -0.55 -0.57 16 24 C -0.12 -0.04 8.60 -39.59 -0.34 -0.38 16 25 C -0.12 -0.07 10.05 -39.59 -0.40 -0.46 16 26 C -0.12 -0.09 10.05 -39.58 -0.40 -0.48 16 27 C -0.12 -0.08 10.05 -39.59 -0.40 -0.47 16 28 C -0.12 -0.06 9.71 -39.59 -0.38 -0.44 16 29 C -0.14 0.06 7.27 -25.91 -0.19 -0.12 16 30 H 0.09 0.28 8.14 -51.93 -0.42 -0.15 16 31 H 0.07 0.03 5.75 -51.93 -0.30 -0.27 16 32 H 0.07 0.19 6.54 -51.93 -0.34 -0.15 16 33 H 0.07 -0.13 6.09 -51.93 -0.32 -0.44 16 34 H 0.38 -1.92 8.74 45.56 0.40 -1.52 16 35 H -0.25 -0.08 7.04 56.52 0.40 0.32 16 36 H -0.25 -0.06 7.11 56.52 0.40 0.34 16 37 H 0.18 -0.26 6.31 -52.49 -0.33 -0.59 16 38 H 0.43 -0.70 8.96 -40.82 -0.37 -1.07 16 39 H 0.17 -0.08 6.69 -52.48 -0.35 -0.43 16 40 H 0.08 -0.23 5.31 -51.93 -0.28 -0.51 16 41 H 0.08 -0.12 5.51 -51.93 -0.29 -0.40 16 42 H 0.06 -0.20 7.44 -51.93 -0.39 -0.59 16 43 H 0.10 -0.18 6.33 -51.93 -0.33 -0.51 16 44 H 0.08 -0.12 6.97 -51.93 -0.36 -0.48 16 45 H 0.12 -0.13 6.68 -52.49 -0.35 -0.49 16 46 H 0.12 -0.12 8.06 -52.48 -0.42 -0.54 16 47 H 0.12 -0.10 8.06 -52.48 -0.42 -0.52 16 48 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 49 H 0.12 -0.12 8.06 -52.48 -0.42 -0.55 16 50 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 51 H 0.09 -0.05 7.72 -51.93 -0.40 -0.45 16 LS Contribution 399.60 15.07 6.02 6.02 Total: 0.00 -10.01 399.60 -13.39 -23.40 By element: Atomic # 1 Polarization: -4.25 SS G_CDS: -6.41 Total: -10.66 kcal Atomic # 6 Polarization: 1.88 SS G_CDS: -6.66 Total: -4.79 kcal Atomic # 7 Polarization: -2.74 SS G_CDS: -0.73 Total: -3.47 kcal Atomic # 8 Polarization: -3.39 SS G_CDS: -0.37 Total: -3.76 kcal Atomic # 14 Polarization: -1.51 SS G_CDS: -5.24 Total: -6.74 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -10.01 -13.39 -23.40 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14797354_12890568.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 102.467 kcal (2) G-P(sol) polarization free energy of solvation -10.013 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 92.454 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.391 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.404 kcal (6) G-S(sol) free energy of system = (1) + (5) 79.063 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds