Wall clock time and date at job start Sun Mar 7 2021 03:51:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.38977 * 119.95214 * 2 1 4 4 O 1.35708 * 119.91241 * 359.97438 * 3 2 1 5 5 C 1.39018 * 120.17631 * 179.97438 * 3 2 1 6 6 C 1.50704 * 119.95946 * 179.97438 * 5 3 2 7 7 O 1.42898 * 109.46736 * 74.99759 * 6 5 3 8 8 Si 1.86296 * 109.47539 * 195.00134 * 6 5 3 9 9 C 1.37685 * 120.09041 * 359.74517 * 5 3 2 10 10 C 1.39760 * 119.90577 * 0.52860 * 9 5 3 11 11 C 1.47605 * 120.08534 * 179.74378 * 10 9 5 12 12 O 1.21581 * 119.99917 * 31.19666 * 11 10 9 13 13 N 1.34769 * 120.00055 * 210.91766 * 11 10 9 14 14 C 1.46500 * 120.00000 * 5.50946 * 13 11 10 15 15 C 1.46504 * 120.00212 * 185.50711 * 13 11 10 16 16 H 1.08997 * 112.84419 * 343.26490 * 15 13 11 17 17 C 1.53776 * 113.61239 * 114.46127 * 15 13 11 18 18 C 1.53782 * 87.08239 * 89.11763 * 17 15 13 19 19 H 1.09000 * 113.61635 * 270.88386 * 18 17 15 20 20 C 1.50696 * 113.61811 * 140.06046 * 18 17 15 21 21 C 1.38235 * 120.00139 * 299.73178 * 20 18 17 22 22 C 1.38240 * 120.00094 * 179.78605 * 21 20 18 23 23 C 1.38237 * 119.99997 * 0.43566 * 22 21 20 24 24 C 1.38235 * 119.99512 * 359.81631 * 23 22 21 25 25 C 1.38229 * 120.00373 * 359.97438 * 24 23 22 26 26 C 1.53781 * 113.61462 * 211.96156 * 15 13 11 27 27 C 1.37718 * 119.96229 * 180.02562 * 2 1 3 28 28 H 1.08993 * 109.47424 * 269.97412 * 1 2 3 29 29 H 1.08994 * 109.47163 * 29.98202 * 1 2 3 30 30 H 1.09006 * 109.46740 * 149.97905 * 1 2 3 31 31 H 0.96698 * 113.99920 * 90.00340 * 4 3 2 32 32 H 1.08994 * 109.46566 * 315.00395 * 6 5 3 33 33 H 0.96699 * 114.00476 * 60.00842 * 7 6 5 34 34 H 1.48501 * 110.00179 * 58.67792 * 8 6 5 35 35 H 1.48494 * 109.99950 * 179.97438 * 8 6 5 36 36 H 1.08003 * 120.05049 * 180.25457 * 9 5 3 37 37 H 1.09000 * 109.47478 * 29.60514 * 14 13 11 38 38 H 1.09003 * 109.47422 * 149.60738 * 14 13 11 39 39 H 1.08998 * 109.47199 * 269.60601 * 14 13 11 40 40 H 1.09000 * 113.61463 * 203.66171 * 17 15 13 41 41 H 1.08999 * 113.61797 * 334.57115 * 17 15 13 42 42 H 1.07999 * 120.00280 * 359.97438 * 21 20 18 43 43 H 1.08002 * 119.99689 * 180.27395 * 22 21 20 44 44 H 1.07995 * 119.99702 * 179.83648 * 23 22 21 45 45 H 1.08007 * 119.99354 * 179.97438 * 24 23 22 46 46 H 1.08003 * 120.00107 * 179.97438 * 25 24 23 47 47 H 1.08998 * 113.61566 * 25.42890 * 26 15 13 48 48 H 1.08996 * 113.61684 * 156.33501 * 26 15 13 49 49 H 1.08002 * 120.03984 * 0.02562 * 27 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2008 1.2042 0.0000 4 8 1.5195 2.3778 -0.0005 5 6 3.5910 1.2096 0.0005 6 6 4.3385 2.5182 0.0000 7 8 4.2714 3.1056 1.3009 8 14 6.1199 2.2158 -0.4538 9 6 4.2860 0.0210 0.0064 10 6 3.5919 -1.1920 0.0006 11 6 4.3329 -2.4686 0.0011 12 8 5.4146 -2.5433 0.5512 13 7 3.8080 -3.5527 -0.6033 14 6 2.5612 -3.4357 -1.3636 15 6 4.4843 -4.8483 -0.5002 16 1 5.5200 -4.7601 -0.1722 17 6 3.6794 -5.9030 0.2773 18 6 3.0346 -6.2864 -1.0652 19 1 2.1352 -5.7157 -1.2964 20 6 2.8474 -7.7711 -1.2428 21 6 3.9434 -8.6133 -1.2227 22 6 3.7712 -9.9758 -1.3812 23 6 2.5039 -10.4951 -1.5688 24 6 1.4085 -9.6523 -1.5940 25 6 1.5802 -8.2904 -1.4312 26 6 4.3027 -5.7384 -1.7410 27 6 2.1948 -1.1931 -0.0005 28 1 -0.3634 -0.0005 1.0276 29 1 -0.3633 0.8901 -0.5135 30 1 -0.3633 -0.8899 -0.5142 31 1 1.3218 2.7182 0.8827 32 1 3.8879 3.1935 -0.7273 33 1 4.6549 2.5584 1.9999 34 1 6.2017 1.5758 -1.7913 35 1 6.8676 3.4987 -0.4585 36 1 5.3660 0.0260 0.0109 37 1 2.4804 -2.4303 -1.7767 38 1 2.5609 -4.1632 -2.1753 39 1 1.7144 -3.6267 -0.7044 40 1 4.2955 -6.6928 0.7071 41 1 2.9768 -5.4760 0.9929 42 1 4.9340 -8.2073 -1.0802 43 1 4.6271 -10.6342 -1.3611 44 1 2.3697 -11.5591 -1.6953 45 1 0.4183 -10.0580 -1.7410 46 1 0.7244 -7.6319 -1.4514 47 1 4.1032 -5.1785 -2.6547 48 1 5.0891 -6.4832 -1.8630 49 1 1.6548 -2.1285 -0.0014 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14797354_13287732.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:51:46 Heat of formation + Delta-G solvation = -9.639961 kcal Electronic energy + Delta-G solvation = -31240.436329 eV Core-core repulsion = 27100.701505 eV Total energy + Delta-G solvation = -4139.734824 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.166 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -42.20810 -41.31867 -40.18076 -38.86747 -37.84896 -37.54358 -35.58848 -34.05186 -32.32775 -31.84375 -31.29097 -28.77827 -28.10003 -26.99825 -26.68859 -26.20518 -24.47530 -23.54706 -22.34170 -22.13549 -21.09747 -19.72835 -19.60591 -18.65800 -18.17163 -17.83053 -17.43388 -17.18714 -16.63248 -16.34910 -16.23754 -16.08943 -15.89628 -15.65583 -15.26914 -15.05670 -14.94678 -14.64621 -14.35518 -14.32215 -14.28286 -14.08580 -14.03547 -13.71365 -13.70425 -13.40595 -13.17623 -13.07734 -12.89122 -12.76431 -12.70495 -12.32505 -12.18099 -12.02924 -11.82312 -11.69207 -11.61329 -11.24563 -10.92004 -10.46626 -9.97100 -9.85435 -9.81802 -9.65813 -9.54538 -4.99714 -0.35886 0.03844 0.40765 0.47945 1.25942 1.57942 1.65816 1.75646 1.97462 2.43249 2.80644 3.08335 3.24118 3.36257 3.42342 3.51183 3.59160 3.62144 3.63567 3.82441 3.87694 3.95245 3.99807 4.08295 4.13648 4.15012 4.21679 4.23599 4.29261 4.43170 4.48626 4.51081 4.51382 4.56043 4.59328 4.64246 4.64355 4.67295 4.78149 4.84450 4.91044 4.98014 5.01901 5.06467 5.07459 5.08894 5.12427 5.25894 5.46451 5.53885 5.55971 5.62053 5.70671 6.07872 6.21843 6.49978 6.56031 7.05254 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 C -0.119 4.119 3 C 0.159 3.841 4 O -0.490 6.490 5 C -0.151 4.151 6 C -0.058 4.058 7 O -0.538 6.538 8 Si 0.678 3.322 9 C -0.048 4.048 10 C -0.136 4.136 11 C 0.565 3.435 12 O -0.526 6.526 13 N -0.593 5.593 14 C 0.060 3.940 15 C 0.119 3.881 16 H 0.112 0.888 17 C -0.138 4.138 18 C -0.079 4.079 19 H 0.101 0.899 20 C -0.072 4.072 21 C -0.117 4.117 22 C -0.117 4.117 23 C -0.124 4.124 24 C -0.118 4.118 25 C -0.117 4.117 26 C -0.141 4.141 27 C -0.075 4.075 28 H 0.073 0.927 29 H 0.077 0.923 30 H 0.070 0.930 31 H 0.399 0.601 32 H 0.119 0.881 33 H 0.379 0.621 34 H -0.256 1.256 35 H -0.250 1.250 36 H 0.141 0.859 37 H 0.081 0.919 38 H 0.082 0.918 39 H 0.063 0.937 40 H 0.096 0.904 41 H 0.074 0.926 42 H 0.122 0.878 43 H 0.122 0.878 44 H 0.121 0.879 45 H 0.121 0.879 46 H 0.120 0.880 47 H 0.078 0.922 48 H 0.100 0.900 49 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.350 -3.036 0.452 4.544 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.119 4.119 3 C 0.114 3.886 4 O -0.301 6.301 5 C -0.152 4.152 6 C -0.169 4.169 7 O -0.344 6.344 8 Si 0.579 3.421 9 C -0.066 4.066 10 C -0.139 4.139 11 C 0.354 3.646 12 O -0.403 6.403 13 N -0.326 5.326 14 C -0.082 4.082 15 C 0.015 3.985 16 H 0.130 0.870 17 C -0.177 4.177 18 C -0.097 4.097 19 H 0.120 0.880 20 C -0.072 4.072 21 C -0.135 4.135 22 C -0.135 4.135 23 C -0.142 4.142 24 C -0.136 4.136 25 C -0.135 4.135 26 C -0.179 4.179 27 C -0.093 4.093 28 H 0.092 0.908 29 H 0.096 0.904 30 H 0.089 0.911 31 H 0.258 0.742 32 H 0.136 0.864 33 H 0.226 0.774 34 H -0.180 1.180 35 H -0.174 1.174 36 H 0.159 0.841 37 H 0.099 0.901 38 H 0.101 0.899 39 H 0.081 0.919 40 H 0.114 0.886 41 H 0.093 0.907 42 H 0.140 0.860 43 H 0.140 0.860 44 H 0.139 0.861 45 H 0.140 0.860 46 H 0.138 0.862 47 H 0.096 0.904 48 H 0.119 0.881 49 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -2.377 -2.466 -0.774 3.512 hybrid contribution -0.845 0.011 0.221 0.874 sum -3.222 -2.455 -0.553 4.089 Atomic orbital electron populations 1.20726 0.89745 1.03726 1.02853 1.20235 0.97295 0.92061 1.02358 1.18310 0.88786 0.85315 0.96213 1.84651 1.75638 1.35757 1.34086 1.20619 0.93935 0.95882 1.04781 1.24926 1.09608 0.93166 0.89223 1.86509 1.84538 1.47147 1.16170 0.94824 0.77090 0.83909 0.86242 1.20893 0.99677 0.90171 0.95848 1.19731 0.93677 0.93182 1.07341 1.18220 0.84982 0.83139 0.78256 1.90813 1.20653 1.84467 1.44343 1.47358 1.25157 1.08066 1.51973 1.22395 0.85547 1.03846 0.96413 1.21957 0.97903 0.81459 0.97192 0.87019 1.23472 0.99605 0.98459 0.96126 1.21794 0.98521 0.92041 0.97358 0.88047 1.19692 0.93310 0.94732 0.99458 1.21024 0.98545 0.93369 1.00586 1.21187 0.97404 0.95301 0.99623 1.21202 0.92846 0.99935 1.00243 1.21184 0.98962 0.93637 0.99810 1.21054 0.96632 0.95382 1.00442 1.23496 0.98050 0.98789 0.97565 1.21594 0.92703 0.98527 0.96501 0.90837 0.90434 0.91103 0.74225 0.86359 0.77390 1.18004 1.17425 0.84137 0.90059 0.89940 0.91894 0.88570 0.90750 0.85975 0.86000 0.86090 0.86049 0.86224 0.90379 0.88132 0.83811 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.26 9.78 36.00 0.35 0.61 16 2 C -0.12 0.07 5.89 -104.54 -0.62 -0.55 16 3 C 0.16 0.08 6.66 -39.02 -0.26 -0.18 16 4 O -0.49 -0.08 11.84 -18.83 -0.22 -0.31 16 5 C -0.15 -0.09 5.27 -104.53 -0.55 -0.64 16 6 C -0.06 -0.02 2.37 36.01 0.09 0.06 16 7 O -0.54 -0.02 12.88 -35.23 -0.45 -0.47 16 8 Si 0.68 0.17 29.92 -169.99 -5.09 -4.92 16 9 C -0.05 -0.04 8.20 -39.22 -0.32 -0.36 16 10 C -0.14 -0.11 5.29 -104.96 -0.56 -0.67 16 11 C 0.56 1.21 7.41 -12.44 -0.09 1.12 16 12 O -0.53 -2.81 16.25 5.29 0.09 -2.72 16 13 N -0.59 0.17 3.08 -174.21 -0.54 -0.36 16 14 C 0.06 -0.18 7.09 59.85 0.42 0.24 16 15 C 0.12 -0.06 4.43 -67.12 -0.30 -0.36 16 16 H 0.11 0.11 7.28 -51.93 -0.38 -0.27 16 17 C -0.14 0.17 7.28 -25.92 -0.19 -0.02 16 18 C -0.08 0.15 3.33 -90.96 -0.30 -0.16 16 19 H 0.10 -0.28 5.74 -51.93 -0.30 -0.58 16 20 C -0.07 0.02 5.29 -104.63 -0.55 -0.53 16 21 C -0.12 0.01 8.63 -39.58 -0.34 -0.33 16 22 C -0.12 -0.02 10.05 -39.58 -0.40 -0.42 16 23 C -0.12 -0.04 10.05 -39.58 -0.40 -0.43 16 24 C -0.12 -0.02 10.05 -39.59 -0.40 -0.42 16 25 C -0.12 0.01 9.71 -39.59 -0.38 -0.38 16 26 C -0.14 0.26 6.66 -25.92 -0.17 0.09 16 27 C -0.07 0.07 7.27 -39.22 -0.29 -0.22 16 28 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 29 H 0.08 -0.12 7.52 -51.93 -0.39 -0.51 16 30 H 0.07 -0.24 8.08 -51.93 -0.42 -0.66 16 31 H 0.40 -1.27 9.06 45.56 0.41 -0.86 16 32 H 0.12 0.17 7.82 -51.93 -0.41 -0.23 16 33 H 0.38 -1.36 8.70 45.56 0.40 -0.96 16 34 H -0.26 -0.73 7.11 56.52 0.40 -0.33 16 35 H -0.25 -0.76 7.11 56.52 0.40 -0.36 16 36 H 0.14 0.03 5.00 -52.48 -0.26 -0.23 16 37 H 0.08 -0.23 5.92 -51.93 -0.31 -0.54 16 38 H 0.08 -0.31 5.00 -51.93 -0.26 -0.57 16 39 H 0.06 -0.28 6.61 -51.93 -0.34 -0.62 16 40 H 0.10 -0.11 7.73 -51.93 -0.40 -0.52 16 41 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 42 H 0.12 -0.18 6.65 -52.49 -0.35 -0.53 16 43 H 0.12 -0.16 8.06 -52.49 -0.42 -0.58 16 44 H 0.12 -0.14 8.06 -52.49 -0.42 -0.57 16 45 H 0.12 -0.17 8.06 -52.48 -0.42 -0.59 16 46 H 0.12 -0.20 8.05 -52.48 -0.42 -0.62 16 47 H 0.08 -0.15 7.00 -51.93 -0.36 -0.51 16 48 H 0.10 -0.21 6.31 -51.93 -0.33 -0.54 16 49 H 0.14 -0.43 4.95 -52.49 -0.26 -0.69 16 LS Contribution 386.76 15.07 5.83 5.83 Total: 0.00 -8.17 386.76 -11.33 -19.49 By element: Atomic # 1 Polarization: -7.31 SS G_CDS: -5.69 Total: -13.00 kcal Atomic # 6 Polarization: 1.71 SS G_CDS: -5.25 Total: -3.54 kcal Atomic # 7 Polarization: 0.17 SS G_CDS: -0.54 Total: -0.36 kcal Atomic # 8 Polarization: -2.91 SS G_CDS: -0.59 Total: -3.50 kcal Atomic # 14 Polarization: 0.17 SS G_CDS: -5.09 Total: -4.92 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -8.17 -11.33 -19.49 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14797354_13287732.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 9.854 kcal (2) G-P(sol) polarization free energy of solvation -8.167 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.687 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.327 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.494 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.640 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds