Wall clock time and date at job start Sun Mar 7 2021 03:52:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.34776 * 120.00098 * 2 1 4 4 O 1.21654 * 119.99831 * 185.04024 * 3 2 1 5 5 C 1.47047 * 119.99888 * 5.04521 * 3 2 1 6 6 C 1.36225 * 123.49040 * 136.63421 * 5 3 2 7 7 Cl 1.73598 * 124.60534 * 0.02562 * 6 5 3 8 8 S 1.70443 * 110.78677 * 179.89386 * 6 5 3 9 9 C 1.75500 * 92.46738 * 0.31508 * 8 6 5 10 10 C 1.50699 * 124.68254 * 179.78071 * 9 8 6 11 11 O 1.42904 * 109.47182 * 245.04067 * 10 9 8 12 12 Si 1.86295 * 109.47421 * 5.04743 * 10 9 8 13 13 C 1.32690 * 110.62614 * 359.82461 * 9 8 6 14 14 C 1.46503 * 119.99671 * 180.02562 * 2 1 3 15 15 H 1.08995 * 112.84580 * 197.26593 * 14 2 1 16 16 C 1.53778 * 113.61545 * 328.57893 * 14 2 1 17 17 C 1.53950 * 87.11387 * 89.18818 * 16 14 2 18 18 H 1.09002 * 113.61249 * 270.84379 * 17 16 14 19 19 C 1.50699 * 113.66865 * 139.89076 * 17 16 14 20 20 C 1.38237 * 119.99732 * 322.27059 * 19 17 16 21 21 C 1.38242 * 119.99925 * 179.78604 * 20 19 17 22 22 C 1.38235 * 119.99495 * 0.44695 * 21 20 19 23 23 C 1.38234 * 120.00139 * 359.81154 * 22 21 20 24 24 C 1.38229 * 119.99930 * 142.55231 * 19 17 16 25 25 C 1.53784 * 113.61343 * 66.07755 * 14 2 1 26 26 H 1.09003 * 109.46885 * 211.76526 * 1 2 3 27 27 H 1.08997 * 109.46808 * 331.75875 * 1 2 3 28 28 H 1.08998 * 109.47320 * 91.75995 * 1 2 3 29 29 H 1.09004 * 109.46260 * 125.04762 * 10 9 8 30 30 H 0.96704 * 113.99322 * 60.00421 * 11 10 9 31 31 H 1.48499 * 109.99961 * 179.97438 * 12 10 9 32 32 H 1.48502 * 109.99895 * 301.31516 * 12 10 9 33 33 H 1.08006 * 123.44871 * 180.02562 * 13 9 8 34 34 H 1.09002 * 113.60930 * 203.66871 * 16 14 2 35 35 H 1.08999 * 113.61531 * 334.56004 * 16 14 2 36 36 H 1.08000 * 120.00134 * 0.02562 * 20 19 17 37 37 H 1.08001 * 120.00186 * 180.27891 * 21 20 19 38 38 H 1.07999 * 119.99404 * 179.83180 * 22 21 20 39 39 H 1.08004 * 119.99575 * 180.02562 * 23 22 21 40 40 H 1.07991 * 120.00505 * 359.97438 * 24 19 17 41 41 H 1.08995 * 113.61570 * 25.42939 * 25 14 2 42 42 H 1.08994 * 113.61572 * 156.25149 * 25 14 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3519 1.1692 -0.0926 5 6 1.4080 2.4382 0.1120 6 6 1.8076 3.4674 0.9100 7 17 3.2262 3.4458 1.9104 8 16 0.7275 4.7804 0.7900 9 6 -0.2975 3.9309 -0.3535 10 6 -1.5557 4.4954 -0.9612 11 8 -2.6812 3.7336 -0.5198 12 14 -1.7598 6.2695 -0.4306 13 6 0.1880 2.7226 -0.6083 14 6 2.1975 -1.2688 -0.0006 15 1 3.2397 -1.1559 0.2976 16 6 1.4641 -2.4038 0.7335 17 6 0.7905 -2.7331 -0.6111 18 1 -0.1398 -2.1902 -0.7779 19 6 0.6633 -4.2108 -0.8781 20 6 1.6770 -5.0712 -0.4999 21 6 1.5584 -6.4273 -0.7408 22 6 0.4302 -6.9217 -1.3683 23 6 -0.5810 -6.0605 -1.7513 24 6 -0.4643 -4.7050 -1.5064 25 6 2.0106 -2.0874 -1.2890 26 1 -0.3633 -0.8738 0.5410 27 1 -0.3633 0.9053 0.4863 28 1 -0.3634 -0.0316 -1.0271 29 1 -1.4876 4.4467 -2.0480 30 1 -2.8034 3.7323 0.4395 31 1 -2.9968 6.8379 -1.0238 32 1 -1.8218 6.3526 1.0508 33 1 -0.2805 2.0234 -1.2852 34 1 2.1268 -3.1911 1.0928 35 1 0.7695 -2.0530 1.4966 36 1 2.5599 -4.6845 -0.0127 37 1 2.3484 -7.1001 -0.4413 38 1 0.3388 -7.9808 -1.5590 39 1 -1.4626 -6.4469 -2.2411 40 1 -1.2544 -4.0324 -1.8056 41 1 1.7570 -1.4811 -2.1585 42 1 2.8233 -2.7872 -1.4834 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14797354_13431040.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:52:32 Heat of formation + Delta-G solvation = 39.203910 kcal Electronic energy + Delta-G solvation = -27500.168291 eV Core-core repulsion = 23566.123762 eV Total energy + Delta-G solvation = -3934.044530 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.069 amu Computer time = 2.25 seconds Orbital eigenvalues (eV) -42.00503 -40.59792 -39.23245 -38.68504 -38.03420 -37.11564 -35.36767 -32.03708 -31.76991 -31.52430 -28.55728 -27.09629 -26.73909 -26.56119 -25.00547 -23.53156 -22.45797 -21.58852 -20.83680 -19.75679 -19.14356 -18.29783 -18.00614 -17.56774 -17.38616 -16.51152 -16.31723 -16.26180 -16.09685 -15.79340 -15.62575 -15.05939 -15.02881 -14.76267 -14.55702 -14.26478 -14.15083 -14.05918 -13.89542 -13.76368 -13.59918 -13.06889 -13.05016 -12.89721 -12.71187 -12.52416 -12.46573 -12.15261 -12.05298 -11.84887 -11.72394 -11.61527 -11.20523 -11.08219 -10.73431 -9.97587 -9.81494 -9.76145 -9.63527 -9.51780 -5.02076 -0.60680 -0.19901 0.43756 0.45300 0.51052 0.77523 0.99479 1.19066 1.53029 1.71228 1.89725 1.93812 2.83984 3.21952 3.38456 3.47004 3.64184 3.68308 3.73349 3.86062 3.94714 4.03216 4.13495 4.16106 4.24144 4.31525 4.37213 4.51118 4.54539 4.57448 4.60879 4.67910 4.72571 4.73569 4.80582 4.85372 4.91354 4.96600 4.98287 5.14030 5.17470 5.18695 5.53688 5.59852 5.65380 5.75890 6.13526 6.19019 6.44866 6.95633 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.057 3.943 2 N -0.584 5.584 3 C 0.574 3.426 4 O -0.561 6.561 5 C -0.157 4.157 6 C -0.147 4.147 7 Cl -0.006 7.006 8 S 0.265 5.735 9 C -0.221 4.221 10 C -0.027 4.027 11 O -0.533 6.533 12 Si 0.700 3.300 13 C -0.070 4.070 14 C 0.114 3.886 15 H 0.086 0.914 16 C -0.131 4.131 17 C -0.067 4.067 18 H 0.116 0.884 19 C -0.079 4.079 20 C -0.128 4.128 21 C -0.131 4.131 22 C -0.138 4.138 23 C -0.130 4.130 24 C -0.127 4.127 25 C -0.134 4.134 26 H 0.093 0.907 27 H 0.085 0.915 28 H 0.078 0.922 29 H 0.147 0.853 30 H 0.390 0.610 31 H -0.269 1.269 32 H -0.253 1.253 33 H 0.177 0.823 34 H 0.103 0.897 35 H 0.084 0.916 36 H 0.130 0.870 37 H 0.132 0.868 38 H 0.131 0.869 39 H 0.134 0.866 40 H 0.135 0.865 41 H 0.069 0.931 42 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.388 0.819 -0.377 5.463 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 N -0.315 5.315 3 C 0.361 3.639 4 O -0.440 6.440 5 C -0.176 4.176 6 C -0.293 4.293 7 Cl 0.023 6.977 8 S 0.530 5.470 9 C -0.339 4.339 10 C -0.140 4.140 11 O -0.341 6.341 12 Si 0.601 3.399 13 C -0.099 4.099 14 C 0.010 3.990 15 H 0.105 0.895 16 C -0.169 4.169 17 C -0.085 4.085 18 H 0.133 0.867 19 C -0.079 4.079 20 C -0.146 4.146 21 C -0.149 4.149 22 C -0.156 4.156 23 C -0.148 4.148 24 C -0.145 4.145 25 C -0.172 4.172 26 H 0.112 0.888 27 H 0.103 0.897 28 H 0.096 0.904 29 H 0.164 0.836 30 H 0.240 0.760 31 H -0.194 1.194 32 H -0.179 1.179 33 H 0.194 0.806 34 H 0.121 0.879 35 H 0.103 0.897 36 H 0.148 0.852 37 H 0.150 0.850 38 H 0.149 0.851 39 H 0.152 0.848 40 H 0.153 0.847 41 H 0.088 0.912 42 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -5.252 2.729 0.141 5.920 hybrid contribution 0.124 -2.380 0.188 2.390 sum -5.128 0.349 0.329 5.150 Atomic orbital electron populations 1.22470 0.77474 1.04944 1.03594 1.47418 1.08043 1.04210 1.71861 1.17813 0.86354 0.83657 0.76077 1.90832 1.15046 1.87522 1.50595 1.20233 0.99086 0.95309 1.03004 1.25667 0.98343 1.02325 1.02971 1.98419 1.35465 1.98128 1.65674 1.83293 1.12376 1.12004 1.39278 1.24893 1.04056 0.99209 1.05694 1.24464 0.80701 1.04838 1.03984 1.86632 1.46293 1.71751 1.29431 0.94430 0.88750 0.75856 0.80826 1.21185 0.91763 0.97143 0.99804 1.21941 0.96510 0.82462 0.98057 0.89536 1.23480 0.99824 0.96946 0.96644 1.21767 0.99139 0.91243 0.96331 0.86651 1.19861 0.94413 0.95281 0.98298 1.21226 0.99218 0.93461 1.00647 1.21421 0.98480 0.95900 0.99071 1.21443 0.94386 1.00670 0.99104 1.21443 0.99506 0.93859 1.00013 1.21317 0.98100 0.95832 0.99205 1.23408 0.98355 0.98465 0.97021 0.88846 0.89664 0.90367 0.83595 0.75978 1.19416 1.17859 0.80573 0.87896 0.89704 0.85181 0.85019 0.85066 0.84811 0.84711 0.91248 0.88941 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.32 7.38 127.77 0.94 0.62 16 2 N -0.58 -0.79 3.08 -823.93 -2.53 -3.33 16 3 C 0.57 4.27 7.20 86.55 0.62 4.89 16 4 O -0.56 -8.76 15.77 -4.20 -0.07 -8.83 16 5 C -0.16 -0.51 5.11 -19.84 -0.10 -0.61 16 6 C -0.15 -0.55 6.85 67.35 0.46 -0.09 16 7 Cl -0.01 -0.04 28.12 -2.72 -0.08 -0.12 16 8 S 0.26 -0.69 20.19 -56.49 -1.14 -1.83 16 9 C -0.22 1.06 5.65 24.51 0.14 1.19 16 10 C -0.03 0.19 2.94 71.24 0.21 0.40 16 11 O -0.53 2.77 12.88 -148.98 -1.92 0.85 16 12 Si 0.70 -4.19 30.92 68.60 2.12 -2.07 16 13 C -0.07 0.21 7.86 22.70 0.18 0.39 16 14 C 0.11 0.15 4.38 45.52 0.20 0.35 16 15 H 0.09 0.52 7.38 -2.39 -0.02 0.50 16 16 C -0.13 0.36 6.66 31.18 0.21 0.57 16 17 C -0.07 0.20 3.35 -10.95 -0.04 0.17 16 18 H 0.12 -0.67 5.77 -2.39 -0.01 -0.68 16 19 C -0.08 -0.01 5.29 -19.87 -0.11 -0.11 16 20 C -0.13 -0.11 8.60 22.27 0.19 0.09 16 21 C -0.13 -0.18 10.05 22.27 0.22 0.05 16 22 C -0.14 -0.18 10.05 22.27 0.22 0.04 16 23 C -0.13 -0.11 10.05 22.27 0.22 0.12 16 24 C -0.13 -0.02 9.71 22.27 0.22 0.19 16 25 C -0.13 0.05 7.28 31.12 0.23 0.28 16 26 H 0.09 -0.74 5.10 -2.39 -0.01 -0.76 16 27 H 0.08 -0.53 5.49 -2.39 -0.01 -0.55 16 28 H 0.08 -0.67 7.41 -2.39 -0.02 -0.68 16 29 H 0.15 -1.35 7.96 -2.38 -0.02 -1.37 16 30 H 0.39 -4.16 8.70 -74.05 -0.64 -4.80 16 31 H -0.27 -0.20 7.11 99.48 0.71 0.50 16 32 H -0.25 0.75 7.11 99.48 0.71 1.45 16 33 H 0.18 -1.15 6.53 -2.91 -0.02 -1.17 16 34 H 0.10 -0.32 6.33 -2.39 -0.02 -0.34 16 35 H 0.08 -0.33 6.94 -2.39 -0.02 -0.34 16 36 H 0.13 -0.22 6.68 -2.91 -0.02 -0.24 16 37 H 0.13 -0.22 8.06 -2.91 -0.02 -0.25 16 38 H 0.13 -0.23 8.06 -2.91 -0.02 -0.25 16 39 H 0.13 -0.34 8.06 -2.91 -0.02 -0.37 16 40 H 0.14 -0.48 8.05 -2.92 -0.02 -0.51 16 41 H 0.07 0.06 8.14 -2.39 -0.02 0.04 16 42 H 0.09 0.01 7.71 -2.39 -0.02 -0.01 16 Total: 0.00 -17.49 365.93 0.88 -16.61 By element: Atomic # 1 Polarization: -10.29 SS G_CDS: 0.47 Total: -9.82 kcal Atomic # 6 Polarization: 4.51 SS G_CDS: 4.02 Total: 8.53 kcal Atomic # 7 Polarization: -0.79 SS G_CDS: -2.53 Total: -3.33 kcal Atomic # 8 Polarization: -5.99 SS G_CDS: -1.99 Total: -7.98 kcal Atomic # 14 Polarization: -4.19 SS G_CDS: 2.12 Total: -2.07 kcal Atomic # 16 Polarization: -0.69 SS G_CDS: -1.14 Total: -1.83 kcal Atomic # 17 Polarization: -0.04 SS G_CDS: -0.08 Total: -0.12 kcal Total: -17.49 0.88 -16.61 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14797354_13431040.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.811 kcal (2) G-P(sol) polarization free energy of solvation -17.489 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.322 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.882 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.607 kcal (6) G-S(sol) free energy of system = (1) + (5) 39.204 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.26 seconds