Wall clock time and date at job start Sun Mar 7 2021 03:52:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.34780 * 120.00213 * 2 1 4 4 O 1.21613 * 120.00410 * 183.43698 * 3 2 1 5 5 C 1.47380 * 119.99654 * 3.43520 * 3 2 1 6 6 C 1.36413 * 127.19206 * 352.21823 * 5 3 2 7 7 O 1.33662 * 108.39787 * 179.89549 * 6 5 3 8 8 C 1.34218 * 110.90300 * 0.39217 * 7 6 5 9 9 C 1.50699 * 125.43384 * 179.75551 * 8 7 6 10 10 O 1.42903 * 109.46868 * 120.00440 * 9 8 7 11 11 Si 1.86294 * 109.47309 * 0.02562 * 9 8 7 12 12 C 1.34174 * 109.12814 * 359.76243 * 8 7 6 13 13 C 1.46501 * 120.00238 * 179.97438 * 2 1 3 14 14 H 1.08993 * 112.91485 * 199.61490 * 13 2 1 15 15 C 1.53782 * 113.61287 * 330.86914 * 13 2 1 16 16 C 1.53778 * 87.08245 * 89.11411 * 15 13 2 17 17 H 1.09004 * 113.61061 * 270.87910 * 16 15 13 18 18 C 1.50700 * 113.61475 * 139.98301 * 16 15 13 19 19 C 1.38235 * 120.00018 * 322.22684 * 18 16 15 20 20 C 1.38232 * 119.99715 * 179.81443 * 19 18 16 21 21 C 1.38229 * 120.00376 * 0.41284 * 20 19 18 22 22 C 1.38240 * 119.99840 * 359.81934 * 21 20 19 23 23 C 1.38224 * 119.99952 * 359.97438 * 22 21 20 24 24 C 1.53777 * 87.08501 * 25.43131 * 16 15 13 25 25 H 1.09000 * 109.47312 * 186.20564 * 1 2 3 26 26 H 1.09003 * 109.46579 * 306.20283 * 1 2 3 27 27 H 1.08995 * 109.47184 * 66.20535 * 1 2 3 28 28 H 1.08002 * 125.80540 * 0.02562 * 6 5 3 29 29 H 1.08995 * 109.47050 * 240.00007 * 9 8 7 30 30 H 0.96703 * 114.00167 * 300.00124 * 10 9 8 31 31 H 1.48503 * 110.00205 * 179.97438 * 11 9 8 32 32 H 1.48498 * 110.00046 * 301.31708 * 11 9 8 33 33 H 1.08000 * 127.02861 * 180.02562 * 12 8 7 34 34 H 1.08998 * 113.61323 * 334.56473 * 15 13 2 35 35 H 1.09000 * 113.69091 * 203.67152 * 15 13 2 36 36 H 1.07995 * 119.99709 * 0.02562 * 19 18 16 37 37 H 1.08005 * 119.99865 * 180.21273 * 20 19 18 38 38 H 1.08004 * 120.00214 * 179.78928 * 21 20 19 39 39 H 1.08002 * 119.99963 * 179.97438 * 22 21 20 40 40 H 1.08004 * 120.00019 * 179.97438 * 23 22 21 41 41 H 1.09000 * 113.61458 * 89.11496 * 24 16 15 42 42 H 1.08991 * 113.61727 * 220.02324 * 24 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1390 1.1672 0.0000 4 8 3.3534 1.1682 -0.0631 5 6 1.4040 2.4424 0.0765 6 6 0.0536 2.6214 0.0047 7 8 -0.2054 3.9278 0.1180 8 6 0.9297 4.6309 0.2551 9 6 1.0176 6.1280 0.4027 10 8 1.6449 6.4480 1.6462 11 14 -0.6962 6.8574 0.3666 12 6 1.9735 3.7880 0.2395 13 6 2.1976 -1.2687 0.0006 14 1 3.2287 -1.1632 0.3375 15 6 1.4397 -2.4173 0.6870 16 6 0.8128 -2.7185 -0.6845 17 1 -0.1109 -2.1710 -0.8721 18 6 0.6929 -4.1908 -0.9832 19 6 1.6922 -5.0600 -0.5873 20 6 1.5803 -6.4109 -0.8579 21 6 0.4732 -6.8915 -1.5319 22 6 -0.5238 -6.0216 -1.9320 23 6 -0.4140 -4.6713 -1.6577 24 6 2.0556 -2.0625 -1.3089 25 1 -0.3634 -1.0216 0.1111 26 1 -0.3632 0.6070 0.8293 27 1 -0.3633 0.4146 -0.9403 28 1 -0.6816 1.8402 -0.1203 29 1 1.6055 6.5401 -0.4174 30 1 1.1752 6.1119 2.4217 31 1 -0.6233 8.3335 0.5119 32 1 -1.3715 6.5049 -0.9081 33 1 3.0186 4.0453 0.3290 34 1 0.7188 -2.0809 1.4322 35 1 2.0886 -3.2122 1.0545 36 1 2.5586 -4.6841 -0.0636 37 1 2.3594 -7.0906 -0.5456 38 1 0.3874 -7.9466 -1.7463 39 1 -1.3886 -6.3970 -2.4589 40 1 -1.1928 -3.9916 -1.9706 41 1 2.8741 -2.7598 -1.4877 42 1 1.8320 -1.4397 -2.1750 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14797354_13456056.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:52:39 Heat of formation + Delta-G solvation = 38.201383 kcal Electronic energy + Delta-G solvation = -25398.898065 eV Core-core repulsion = 21700.539176 eV Total energy + Delta-G solvation = -3698.358889 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 314.135 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -43.75281 -41.89625 -40.18635 -38.76132 -38.05741 -35.76862 -33.79449 -32.27154 -31.85261 -31.35642 -28.96113 -26.98596 -26.62669 -26.29003 -24.44196 -23.54399 -22.34333 -21.91908 -21.21994 -19.86305 -18.84910 -18.28943 -17.78570 -17.57184 -17.33913 -17.14981 -16.52482 -16.35067 -16.14240 -15.79029 -15.68339 -15.08685 -14.98911 -14.36397 -14.30087 -14.22171 -14.21240 -14.14439 -13.90930 -13.75027 -13.55570 -13.11078 -13.08258 -12.82085 -12.67552 -12.15475 -12.14625 -11.79871 -11.67334 -11.27808 -10.97044 -10.85811 -10.66040 -9.86119 -9.81756 -9.78701 -9.56893 -5.08711 0.23821 0.39760 0.47133 0.89271 1.11653 1.43632 1.71027 1.83518 1.90089 2.28321 2.79576 3.18688 3.26139 3.40446 3.48478 3.56363 3.60853 3.73049 3.81703 3.84274 3.93370 4.07048 4.08947 4.14517 4.20882 4.21793 4.30445 4.38442 4.49043 4.55003 4.59554 4.62176 4.64423 4.76108 4.77678 4.87098 4.91590 5.06363 5.07060 5.11138 5.23003 5.49990 5.54897 5.61281 5.68861 5.84661 6.06940 6.23581 6.37058 7.13769 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.043 3.957 2 N -0.594 5.594 3 C 0.590 3.410 4 O -0.528 6.528 5 C -0.236 4.236 6 C 0.011 3.989 7 O -0.167 6.167 8 C -0.059 4.059 9 C -0.029 4.029 10 O -0.530 6.530 11 Si 0.707 3.293 12 C -0.124 4.124 13 C 0.121 3.879 14 H 0.109 0.891 15 C -0.140 4.140 16 C -0.082 4.082 17 H 0.104 0.896 18 C -0.072 4.072 19 C -0.117 4.117 20 C -0.117 4.117 21 C -0.124 4.124 22 C -0.118 4.118 23 C -0.117 4.117 24 C -0.138 4.138 25 H 0.099 0.901 26 H 0.075 0.925 27 H 0.068 0.932 28 H 0.230 0.770 29 H 0.133 0.867 30 H 0.384 0.616 31 H -0.247 1.247 32 H -0.253 1.253 33 H 0.161 0.839 34 H 0.078 0.922 35 H 0.101 0.899 36 H 0.122 0.878 37 H 0.122 0.878 38 H 0.121 0.879 39 H 0.122 0.878 40 H 0.120 0.880 41 H 0.096 0.904 42 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.104 -2.355 1.781 6.781 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 N -0.327 5.327 3 C 0.380 3.620 4 O -0.405 6.405 5 C -0.240 4.240 6 C -0.059 4.059 7 O -0.064 6.064 8 C -0.107 4.107 9 C -0.140 4.140 10 O -0.335 6.335 11 Si 0.606 3.394 12 C -0.143 4.143 13 C 0.017 3.983 14 H 0.127 0.873 15 C -0.178 4.178 16 C -0.099 4.099 17 H 0.122 0.878 18 C -0.072 4.072 19 C -0.135 4.135 20 C -0.135 4.135 21 C -0.142 4.142 22 C -0.136 4.136 23 C -0.135 4.135 24 C -0.177 4.177 25 H 0.117 0.883 26 H 0.094 0.906 27 H 0.086 0.914 28 H 0.246 0.754 29 H 0.150 0.850 30 H 0.232 0.768 31 H -0.172 1.172 32 H -0.177 1.177 33 H 0.179 0.821 34 H 0.097 0.903 35 H 0.120 0.880 36 H 0.140 0.860 37 H 0.140 0.860 38 H 0.139 0.861 39 H 0.140 0.860 40 H 0.138 0.862 41 H 0.114 0.886 42 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -5.840 -1.352 0.942 6.068 hybrid contribution 0.600 -0.617 -0.423 0.959 sum -5.241 -1.969 0.519 5.622 Atomic orbital electron populations 1.22626 0.80391 1.05237 1.01672 1.47304 1.06400 1.05117 1.73886 1.17278 0.86621 0.82168 0.75978 1.90816 1.13359 1.86972 1.49315 1.21452 0.93465 0.94651 1.14445 1.25849 0.97043 0.83380 0.99618 1.83729 1.34345 1.18139 1.70140 1.22752 0.83486 0.95535 1.08961 1.24457 1.11388 0.87806 0.90304 1.86578 1.54201 1.78384 1.14352 0.94266 0.76443 0.80623 0.88021 1.22519 1.00323 0.89225 1.02263 1.21938 0.97242 0.81964 0.97106 0.87274 1.23519 1.00115 0.97835 0.96340 1.21880 0.99041 0.92127 0.96894 0.87801 1.19685 0.94641 0.94641 0.98271 1.21021 0.98750 0.93284 1.00452 1.21184 0.98097 0.95549 0.98663 1.21206 0.94385 0.99901 0.98704 1.21184 0.99016 0.93544 0.99834 1.21054 0.97738 0.95622 0.99106 1.23485 0.97723 0.98822 0.97664 0.88255 0.90648 0.91363 0.75425 0.85009 0.76827 1.17162 1.17727 0.82090 0.90302 0.88034 0.85973 0.85985 0.86071 0.86027 0.86204 0.88591 0.90719 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 -0.17 7.46 59.85 0.45 0.28 16 2 N -0.59 0.03 3.07 -174.28 -0.54 -0.51 16 3 C 0.59 1.96 7.67 -12.54 -0.10 1.86 16 4 O -0.53 -3.92 16.57 5.27 0.09 -3.83 16 5 C -0.24 -0.42 6.21 -103.27 -0.64 -1.06 16 6 C 0.01 -0.01 10.10 30.07 0.30 0.29 16 7 O -0.17 0.04 8.89 7.62 0.07 0.11 16 8 C -0.06 -0.04 6.20 -35.74 -0.22 -0.26 16 9 C -0.03 0.02 2.98 36.01 0.11 0.12 16 10 O -0.53 0.17 12.86 -35.23 -0.45 -0.29 16 11 Si 0.71 -1.08 32.08 -169.99 -5.45 -6.53 16 12 C -0.12 -0.29 10.89 -37.45 -0.41 -0.70 16 13 C 0.12 -0.02 4.36 -67.11 -0.29 -0.31 16 14 H 0.11 0.18 7.41 -51.93 -0.38 -0.21 16 15 C -0.14 0.29 6.64 -25.92 -0.17 0.12 16 16 C -0.08 0.16 3.32 -90.96 -0.30 -0.15 16 17 H 0.10 -0.33 5.51 -51.93 -0.29 -0.62 16 18 C -0.07 0.02 5.29 -104.62 -0.55 -0.53 16 19 C -0.12 0.01 8.60 -39.58 -0.34 -0.33 16 20 C -0.12 -0.02 10.05 -39.59 -0.40 -0.42 16 21 C -0.12 -0.03 10.05 -39.58 -0.40 -0.43 16 22 C -0.12 -0.02 10.05 -39.59 -0.40 -0.41 16 23 C -0.12 0.02 9.71 -39.59 -0.38 -0.37 16 24 C -0.14 0.10 7.30 -25.92 -0.19 -0.09 16 25 H 0.10 -0.50 3.96 -51.93 -0.21 -0.70 16 26 H 0.08 -0.40 6.10 -51.93 -0.32 -0.71 16 27 H 0.07 -0.36 6.91 -51.93 -0.36 -0.71 16 28 H 0.23 -1.19 4.19 -52.49 -0.22 -1.41 16 29 H 0.13 -0.09 7.96 -51.93 -0.41 -0.51 16 30 H 0.38 -1.64 8.70 45.56 0.40 -1.24 16 31 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 32 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 33 H 0.16 0.47 8.06 -52.49 -0.42 0.05 16 34 H 0.08 -0.20 7.26 -51.93 -0.38 -0.58 16 35 H 0.10 -0.23 6.32 -51.93 -0.33 -0.56 16 36 H 0.12 -0.18 6.68 -52.49 -0.35 -0.53 16 37 H 0.12 -0.16 8.06 -52.48 -0.42 -0.58 16 38 H 0.12 -0.15 8.06 -52.48 -0.42 -0.57 16 39 H 0.12 -0.17 8.06 -52.49 -0.42 -0.60 16 40 H 0.12 -0.22 8.06 -52.48 -0.42 -0.64 16 41 H 0.10 -0.06 7.71 -51.93 -0.40 -0.46 16 42 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 LS Contribution 341.70 15.07 5.15 5.15 Total: 0.00 -9.03 341.70 -10.05 -19.09 By element: Atomic # 1 Polarization: -5.82 SS G_CDS: -4.98 Total: -10.80 kcal Atomic # 6 Polarization: 1.54 SS G_CDS: -3.94 Total: -2.39 kcal Atomic # 7 Polarization: 0.03 SS G_CDS: -0.54 Total: -0.51 kcal Atomic # 8 Polarization: -3.71 SS G_CDS: -0.30 Total: -4.01 kcal Atomic # 14 Polarization: -1.08 SS G_CDS: -5.45 Total: -6.53 kcal Total LS contribution 5.15 Total: 5.15 kcal Total: -9.03 -10.05 -19.09 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14797354_13456056.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.291 kcal (2) G-P(sol) polarization free energy of solvation -9.035 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 48.256 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.055 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.090 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.201 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds