Wall clock time and date at job start Sun Mar 7 2021 03:53:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.34774 * 119.99688 * 2 1 4 4 O 1.21285 * 120.00009 * 180.02562 * 3 2 1 5 5 C 1.50703 * 120.00120 * 0.02562 * 3 2 1 6 6 O 1.42898 * 109.47100 * 179.97438 * 5 3 2 7 7 C 1.35903 * 117.00110 * 180.02562 * 6 5 3 8 8 C 1.38736 * 120.05266 * 359.73095 * 7 6 5 9 9 C 1.38147 * 119.94187 * 179.74469 * 8 7 6 10 10 C 1.38272 * 120.05499 * 0.50644 * 9 8 7 11 11 C 1.50692 * 119.94240 * 179.74728 * 10 9 8 12 12 O 1.42900 * 109.47374 * 245.01829 * 11 10 9 13 13 Si 1.86302 * 109.47380 * 5.02083 * 11 10 9 14 14 C 1.38265 * 120.11005 * 359.76533 * 10 9 8 15 15 C 1.38139 * 120.05725 * 359.97438 * 14 10 9 16 16 C 1.46503 * 120.00357 * 180.02562 * 2 1 3 17 17 H 1.08994 * 112.85022 * 184.03044 * 16 2 1 18 18 C 1.53953 * 113.53246 * 315.33751 * 16 2 1 19 19 C 1.53786 * 87.01947 * 89.19031 * 18 16 2 20 20 H 1.09002 * 113.61152 * 270.76887 * 19 18 16 21 21 C 1.50698 * 113.61474 * 139.94982 * 19 18 16 22 22 C 1.38227 * 120.00007 * 140.86259 * 21 19 18 23 23 C 1.38236 * 120.00392 * 180.02562 * 22 21 19 24 24 C 1.38240 * 119.99656 * 359.97088 * 23 22 21 25 25 C 1.38240 * 119.99898 * 0.03475 * 24 23 22 26 26 C 1.38227 * 120.00016 * 359.96430 * 25 24 23 27 27 C 1.53779 * 113.61575 * 52.83314 * 16 2 1 28 28 H 1.09004 * 109.46855 * 263.95072 * 1 2 3 29 29 H 1.08996 * 109.47688 * 23.95852 * 1 2 3 30 30 H 1.09003 * 109.46798 * 143.96101 * 1 2 3 31 31 H 1.08999 * 109.47344 * 300.00090 * 5 3 2 32 32 H 1.09002 * 109.46854 * 60.00049 * 5 3 2 33 33 H 1.07996 * 120.02763 * 359.97438 * 8 7 6 34 34 H 1.07993 * 119.97210 * 180.27157 * 9 8 7 35 35 H 1.09002 * 109.47268 * 125.02034 * 11 10 9 36 36 H 0.96705 * 113.99708 * 60.00006 * 12 11 10 37 37 H 1.48505 * 110.00038 * 58.68046 * 13 11 10 38 38 H 1.48501 * 110.00061 * 179.97438 * 13 11 10 39 39 H 1.08000 * 119.97284 * 179.97438 * 14 10 9 40 40 H 1.08009 * 120.03007 * 179.97438 * 15 14 10 41 41 H 1.09004 * 113.66916 * 334.65839 * 18 16 2 42 42 H 1.09004 * 113.61107 * 203.70874 * 18 16 2 43 43 H 1.08004 * 120.00465 * 359.97438 * 22 21 19 44 44 H 1.07996 * 120.00704 * 179.70512 * 23 22 21 45 45 H 1.07995 * 120.00277 * 179.97438 * 24 23 22 46 46 H 1.07998 * 119.99898 * 180.02562 * 25 24 23 47 47 H 1.08002 * 119.99810 * 180.02562 * 26 25 24 48 48 H 1.08999 * 113.61420 * 156.33745 * 27 16 2 49 49 H 1.09002 * 113.68931 * 25.44304 * 27 16 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1388 1.1672 0.0000 4 8 3.3516 1.1673 -0.0005 5 6 1.3852 2.4723 0.0006 6 8 2.3138 3.5585 0.0011 7 6 1.7943 4.8143 0.0022 8 6 0.4191 4.9973 -0.0029 9 6 -0.1065 6.2749 0.0036 10 6 0.7369 7.3707 0.0045 11 6 0.1608 8.7631 0.0058 12 8 0.5043 9.4220 -1.2148 13 14 -1.6934 8.6680 0.1596 14 6 2.1078 7.1909 0.0038 15 6 2.6383 5.9154 0.0028 16 6 2.1976 -1.2687 -0.0006 17 1 3.2769 -1.1343 0.0701 18 6 1.6356 -2.3035 0.9912 19 6 0.7147 -2.7749 -0.1467 20 1 -0.2362 -2.2436 -0.1873 21 6 0.5520 -4.2717 -0.2109 22 6 -0.6809 -4.8207 -0.5096 23 6 -0.8303 -6.1937 -0.5679 24 6 0.2534 -7.0177 -0.3280 25 6 1.4864 -6.4686 -0.0291 26 6 1.6357 -5.0957 0.0291 27 6 1.7685 -2.2274 -1.1238 28 1 -0.3633 -0.1083 1.0220 29 1 -0.3634 0.9391 -0.4173 30 1 -0.3633 -0.8310 -0.6046 31 1 0.7582 2.5303 -0.8891 32 1 0.7589 2.5298 0.8909 33 1 -0.2399 4.1418 -0.0081 34 1 -1.1769 6.4179 0.0041 35 1 0.5669 9.3236 0.8479 36 1 0.1747 8.9775 -2.0079 37 1 -2.0636 7.9569 1.4097 38 1 -2.2736 10.0350 0.1627 39 1 2.7644 8.0483 0.0041 40 1 3.7093 5.7755 0.0019 41 1 1.1004 -1.8594 1.8305 42 1 2.3648 -3.0520 1.3012 43 1 -1.5277 -4.1771 -0.6967 44 1 -1.7946 -6.6228 -0.7967 45 1 0.1367 -8.0904 -0.3732 46 1 2.3331 -7.1123 0.1579 47 1 2.5991 -4.6667 0.2623 48 1 2.5341 -2.9550 -1.3931 49 1 1.3403 -1.7231 -1.9901 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14797354_2989410.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:53:46 Heat of formation + Delta-G solvation = 3.471750 kcal Electronic energy + Delta-G solvation = -29893.758124 eV Core-core repulsion = 25754.591867 eV Total energy + Delta-G solvation = -4139.166257 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.166 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -42.02472 -41.30823 -40.30598 -39.21495 -38.61256 -37.10627 -35.56277 -32.45387 -32.00683 -31.76065 -31.64243 -29.59250 -28.43015 -26.74191 -26.29534 -25.59096 -24.07742 -23.54782 -22.65517 -22.16953 -21.08998 -19.82941 -19.45895 -18.36330 -18.27760 -17.70836 -17.58381 -17.31482 -16.80426 -16.51058 -16.14828 -16.10405 -15.90436 -15.81342 -15.51505 -15.12687 -14.97217 -14.62492 -14.41384 -14.33127 -14.27730 -14.09651 -14.05102 -13.64892 -13.57819 -13.45483 -13.29806 -13.27758 -12.99946 -12.66538 -12.24935 -12.09155 -12.08698 -12.05090 -11.76095 -11.70711 -11.58047 -11.18699 -10.87133 -10.39204 -10.04598 -9.81502 -9.76619 -9.52090 -9.24057 -4.98083 0.27152 0.30452 0.44876 0.52187 1.35034 1.35297 1.36283 1.66676 2.00708 2.40794 2.65285 2.85005 3.27758 3.46684 3.57662 3.66853 3.70993 3.72922 3.80202 3.93382 3.94250 3.96869 4.01519 4.03595 4.16338 4.20067 4.23903 4.30723 4.31752 4.41029 4.49726 4.52243 4.60725 4.66131 4.67043 4.69632 4.73883 4.84604 4.86846 4.95704 4.97108 4.99488 5.14758 5.16123 5.19097 5.22024 5.24982 5.49768 5.51299 5.60772 5.66558 5.69806 5.76780 6.14720 6.15140 6.33746 6.80769 6.96638 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.045 3.955 2 N -0.588 5.588 3 C 0.511 3.489 4 O -0.574 6.574 5 C 0.040 3.960 6 O -0.322 6.322 7 C 0.120 3.880 8 C -0.199 4.199 9 C -0.073 4.073 10 C -0.162 4.162 11 C -0.075 4.075 12 O -0.559 6.559 13 Si 0.784 3.216 14 C -0.061 4.061 15 C -0.167 4.167 16 C 0.110 3.890 17 H 0.083 0.917 18 C -0.133 4.133 19 C -0.071 4.071 20 H 0.128 0.872 21 C -0.079 4.079 22 C -0.125 4.125 23 C -0.130 4.130 24 C -0.139 4.139 25 C -0.133 4.133 26 C -0.129 4.129 27 C -0.133 4.133 28 H 0.079 0.921 29 H 0.101 0.899 30 H 0.098 0.902 31 H 0.130 0.870 32 H 0.125 0.875 33 H 0.167 0.833 34 H 0.157 0.843 35 H 0.101 0.899 36 H 0.395 0.605 37 H -0.282 1.282 38 H -0.304 1.304 39 H 0.131 0.869 40 H 0.124 0.876 41 H 0.081 0.919 42 H 0.095 0.905 43 H 0.140 0.860 44 H 0.135 0.865 45 H 0.130 0.870 46 H 0.129 0.871 47 H 0.127 0.873 48 H 0.091 0.909 49 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.281 -3.814 -1.814 10.197 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.095 4.095 2 N -0.321 5.321 3 C 0.299 3.701 4 O -0.453 6.453 5 C -0.037 4.037 6 O -0.235 6.235 7 C 0.075 3.925 8 C -0.217 4.217 9 C -0.090 4.090 10 C -0.162 4.162 11 C -0.184 4.184 12 O -0.367 6.367 13 Si 0.690 3.310 14 C -0.080 4.080 15 C -0.186 4.186 16 C 0.006 3.994 17 H 0.101 0.899 18 C -0.172 4.172 19 C -0.089 4.089 20 H 0.146 0.854 21 C -0.079 4.079 22 C -0.142 4.142 23 C -0.148 4.148 24 C -0.157 4.157 25 C -0.151 4.151 26 C -0.147 4.147 27 C -0.171 4.171 28 H 0.098 0.902 29 H 0.119 0.881 30 H 0.116 0.884 31 H 0.147 0.853 32 H 0.142 0.858 33 H 0.184 0.816 34 H 0.174 0.826 35 H 0.119 0.881 36 H 0.245 0.755 37 H -0.208 1.208 38 H -0.233 1.233 39 H 0.149 0.851 40 H 0.142 0.858 41 H 0.099 0.901 42 H 0.114 0.886 43 H 0.158 0.842 44 H 0.153 0.847 45 H 0.148 0.852 46 H 0.147 0.853 47 H 0.145 0.855 48 H 0.110 0.890 49 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -8.857 -3.262 -0.936 9.485 hybrid contribution 1.113 -0.132 0.430 1.201 sum -7.744 -3.394 -0.506 8.470 Atomic orbital electron populations 1.22588 0.76587 1.05954 1.04410 1.47473 1.08459 1.03847 1.72272 1.20642 0.87547 0.86024 0.75882 1.90750 1.16258 1.87707 1.50599 1.22793 0.91429 0.82652 1.06818 1.86131 1.35999 1.12520 1.88844 1.19225 0.93068 0.83588 0.96639 1.21511 0.92879 0.99752 1.07541 1.21071 1.00045 0.91232 0.96644 1.20369 0.94109 0.96035 1.05722 1.25211 1.12538 0.90851 0.89823 1.86471 1.81081 1.53194 1.15971 0.93800 0.72825 0.79143 0.85260 1.20904 0.95214 0.95887 0.95955 1.20611 1.00212 0.90917 1.06863 1.21983 0.96719 0.82576 0.98112 0.89886 1.23458 0.99260 0.97466 0.96978 1.21969 0.99603 0.90955 0.96342 0.85444 1.19890 0.93495 0.95404 0.99086 1.21343 0.97513 0.95385 1.00000 1.21456 0.99465 0.94112 0.99776 1.21440 0.93365 1.00738 1.00145 1.21404 0.98103 0.95575 0.99972 1.21218 0.99197 0.93613 1.00697 1.23410 0.98884 0.97810 0.97019 0.90207 0.88058 0.88419 0.85285 0.85755 0.81578 0.82566 0.88123 0.75514 1.20833 1.23275 0.85075 0.85760 0.90073 0.88645 0.84234 0.84742 0.85202 0.85279 0.85480 0.89043 0.90238 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.55 8.99 127.77 1.15 0.60 16 2 N -0.59 1.59 3.09 -819.32 -2.53 -0.94 16 3 C 0.51 1.97 7.75 87.66 0.68 2.65 16 4 O -0.57 -9.02 15.95 15.99 0.26 -8.77 16 5 C 0.04 -0.13 3.69 71.24 0.26 0.14 16 6 O -0.32 -1.96 9.67 -73.42 -0.71 -2.67 16 7 C 0.12 0.38 6.69 22.51 0.15 0.53 16 8 C -0.20 0.71 9.04 22.37 0.20 0.91 16 9 C -0.07 0.28 8.66 22.26 0.19 0.48 16 10 C -0.16 0.03 5.35 -19.85 -0.11 -0.08 16 11 C -0.07 0.06 2.80 71.23 0.20 0.26 16 12 O -0.56 -0.26 12.83 -148.98 -1.91 -2.17 16 13 Si 0.78 -2.96 29.80 68.60 2.04 -0.92 16 14 C -0.06 -0.18 9.68 22.25 0.22 0.03 16 15 C -0.17 -0.84 9.99 22.36 0.22 -0.62 16 16 C 0.11 -0.07 4.50 45.58 0.21 0.14 16 17 H 0.08 0.46 7.17 -2.39 -0.02 0.44 16 18 C -0.13 0.50 6.88 31.18 0.21 0.72 16 19 C -0.07 0.39 3.33 -11.01 -0.04 0.36 16 20 H 0.13 -1.25 5.03 -2.39 -0.01 -1.26 16 21 C -0.08 0.13 5.29 -19.87 -0.11 0.03 16 22 C -0.12 0.24 9.71 22.27 0.22 0.45 16 23 C -0.13 0.08 10.05 22.27 0.22 0.31 16 24 C -0.14 -0.07 10.05 22.27 0.22 0.16 16 25 C -0.13 -0.10 10.05 22.27 0.22 0.12 16 26 C -0.13 0.00 8.54 22.27 0.19 0.19 16 27 C -0.13 0.44 6.91 31.12 0.22 0.66 16 28 H 0.08 -1.11 8.14 -2.38 -0.02 -1.13 16 29 H 0.10 -1.72 6.23 -2.39 -0.01 -1.73 16 30 H 0.10 -1.34 4.87 -2.39 -0.01 -1.35 16 31 H 0.13 -1.33 6.93 -2.39 -0.02 -1.35 16 32 H 0.12 -1.17 7.64 -2.39 -0.02 -1.19 16 33 H 0.17 -1.90 6.30 -2.91 -0.02 -1.92 16 34 H 0.16 -1.53 4.90 -2.91 -0.01 -1.54 16 35 H 0.10 0.11 7.96 -2.39 -0.02 0.09 16 36 H 0.39 -3.11 8.70 -74.05 -0.64 -3.75 16 37 H -0.28 -0.06 7.11 99.48 0.71 0.65 16 38 H -0.30 -1.37 7.11 99.48 0.71 -0.67 16 39 H 0.13 0.30 8.06 -2.91 -0.02 0.28 16 40 H 0.12 0.73 8.06 -2.91 -0.02 0.71 16 41 H 0.08 -0.36 8.09 -2.38 -0.02 -0.38 16 42 H 0.10 -0.29 6.40 -2.38 -0.02 -0.31 16 43 H 0.14 -0.91 8.05 -2.91 -0.02 -0.94 16 44 H 0.13 -0.55 8.06 -2.91 -0.02 -0.57 16 45 H 0.13 -0.31 8.06 -2.91 -0.02 -0.33 16 46 H 0.13 -0.24 8.06 -2.91 -0.02 -0.26 16 47 H 0.13 -0.26 6.73 -2.91 -0.02 -0.28 16 48 H 0.09 -0.19 7.64 -2.39 -0.02 -0.20 16 49 H 0.08 -0.31 8.13 -2.39 -0.02 -0.33 16 Total: 0.00 -27.04 392.68 2.26 -24.78 By element: Atomic # 1 Polarization: -17.71 SS G_CDS: 0.38 Total: -17.33 kcal Atomic # 6 Polarization: 3.28 SS G_CDS: 4.74 Total: 8.02 kcal Atomic # 7 Polarization: 1.59 SS G_CDS: -2.53 Total: -0.94 kcal Atomic # 8 Polarization: -11.24 SS G_CDS: -2.37 Total: -13.61 kcal Atomic # 14 Polarization: -2.96 SS G_CDS: 2.04 Total: -0.92 kcal Total: -27.04 2.26 -24.78 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14797354_2989410.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.254 kcal (2) G-P(sol) polarization free energy of solvation -27.043 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.210 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.261 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.782 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.472 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds