Wall clock time and date at job start Sun Mar 7 2021 03:55:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.34779 * 120.00617 * 2 1 4 4 O 1.21277 * 120.00580 * 180.02562 * 3 2 1 5 5 C 1.50701 * 119.99413 * 0.02562 * 3 2 1 6 6 O 1.42896 * 109.47164 * 179.97438 * 5 3 2 7 7 C 1.35896 * 117.00482 * 180.02562 * 6 5 3 8 8 C 1.38708 * 120.05775 * 180.02562 * 7 6 5 9 9 N 1.48003 * 120.02965 * 359.97239 * 8 7 6 10 10 O 1.21803 * 120.00152 * 179.97438 * 9 8 7 11 11 O 1.21801 * 119.99992 * 0.02562 * 9 8 7 12 12 C 1.38173 * 119.94366 * 179.70673 * 8 7 6 13 13 C 1.38250 * 120.05122 * 0.54297 * 12 8 7 14 14 C 1.50703 * 119.94029 * 179.72685 * 13 12 8 15 15 O 1.42904 * 109.46820 * 64.72801 * 14 13 12 16 16 Si 1.86296 * 109.47111 * 184.72561 * 14 13 12 17 17 C 1.38289 * 120.11404 * 359.45275 * 13 12 8 18 18 C 1.38118 * 120.05477 * 0.27705 * 17 13 12 19 19 C 1.46501 * 119.99883 * 180.02562 * 2 1 3 20 20 H 1.08997 * 112.85259 * 114.69489 * 19 2 1 21 21 C 1.53785 * 113.61427 * 245.89204 * 19 2 1 22 22 C 1.53784 * 87.07859 * 89.11529 * 21 19 2 23 23 H 1.08999 * 113.61415 * 270.88446 * 22 21 19 24 24 C 1.50705 * 113.61167 * 140.06548 * 22 21 19 25 25 C 1.38229 * 119.99902 * 299.72436 * 24 22 21 26 26 C 1.38240 * 119.99820 * 179.76901 * 25 24 22 27 27 C 1.38233 * 119.99869 * 0.50358 * 26 25 24 28 28 C 1.38241 * 120.00041 * 359.75162 * 27 26 25 29 29 C 1.38229 * 120.00057 * 359.97438 * 28 27 26 30 30 C 1.53782 * 87.08282 * 25.43484 * 22 21 19 31 31 H 1.08995 * 109.47208 * 95.34485 * 1 2 3 32 32 H 1.09004 * 109.46924 * 215.35059 * 1 2 3 33 33 H 1.09000 * 109.46700 * 335.34652 * 1 2 3 34 34 H 1.09003 * 109.47007 * 59.99964 * 5 3 2 35 35 H 1.09003 * 109.47540 * 300.00052 * 5 3 2 36 36 H 1.07995 * 119.97513 * 180.29150 * 12 8 7 37 37 H 1.08998 * 109.46964 * 304.72767 * 14 13 12 38 38 H 0.96702 * 113.99937 * 179.97438 * 15 14 13 39 39 H 1.48506 * 110.00131 * 300.00507 * 16 14 13 40 40 H 1.48508 * 109.99801 * 61.31748 * 16 14 13 41 41 H 1.07998 * 119.97161 * 180.29418 * 17 13 12 42 42 H 1.07999 * 120.03113 * 179.97438 * 18 17 13 43 43 H 1.09004 * 113.61532 * 203.66400 * 21 19 2 44 44 H 1.08993 * 113.61504 * 334.56744 * 21 19 2 45 45 H 1.08002 * 120.00393 * 0.02562 * 25 24 22 46 46 H 1.08000 * 120.00064 * 180.23605 * 26 25 24 47 47 H 1.08004 * 120.00435 * 179.72605 * 27 26 25 48 48 H 1.07998 * 120.00023 * 179.97438 * 28 27 26 49 49 H 1.08000 * 120.00525 * 179.97438 * 29 28 27 50 50 H 1.08999 * 113.61387 * 220.02195 * 30 22 21 51 51 H 1.08996 * 113.61772 * 89.11843 * 30 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1390 1.1671 0.0000 4 8 3.3518 1.1671 -0.0005 5 6 1.3855 2.4723 0.0006 6 8 2.3141 3.5584 0.0011 7 6 1.7948 4.8142 0.0022 8 6 2.6387 5.9150 0.0022 9 7 4.1062 5.7232 0.0016 10 8 4.8468 6.6902 0.0011 11 8 4.5734 4.5984 0.0006 12 6 2.1081 7.1908 -0.0028 13 6 0.7374 7.3706 0.0035 14 6 0.1615 8.7632 0.0042 15 8 0.5051 9.4214 -1.2168 16 14 -1.6927 8.6683 0.1580 17 6 -0.1061 6.2748 0.0034 18 6 0.4193 4.9974 0.0028 19 6 2.1975 -1.2687 -0.0006 20 1 2.7725 -1.4251 -0.9132 21 6 3.0039 -1.5151 1.2855 22 6 1.7414 -2.1829 1.8556 23 1 1.0717 -1.4888 2.3634 24 6 2.0270 -3.4202 2.6672 25 6 2.6591 -4.5007 2.0808 26 6 2.9254 -5.6338 2.8265 27 6 2.5503 -5.6903 4.1558 28 6 1.9135 -4.6117 4.7408 29 6 1.6522 -3.4765 3.9966 30 6 1.3361 -2.4776 0.4017 31 1 -0.3633 -0.0957 -1.0231 32 1 -0.3633 -0.8382 0.5946 33 1 -0.3633 0.9340 0.4287 34 1 0.7592 2.5298 0.8908 35 1 0.7585 2.5303 -0.8891 36 1 2.7647 8.0482 -0.0076 37 1 0.5677 9.3239 0.8461 38 1 0.1662 10.3245 -1.2857 39 1 -2.2588 7.9061 -0.9839 40 1 -2.0633 8.0142 1.4388 41 1 -1.1766 6.4179 0.0036 42 1 -0.2398 4.1419 0.0032 43 1 3.8392 -2.2026 1.1522 44 1 3.2865 -0.5999 1.8057 45 1 2.9486 -4.4581 1.0412 46 1 3.4226 -6.4765 2.3695 47 1 2.7544 -6.5772 4.7373 48 1 1.6200 -4.6560 5.7792 49 1 1.1544 -2.6340 4.4534 50 1 0.2723 -2.3393 0.2083 51 1 1.7154 -3.4281 0.0267 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14797354_4549638.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:55:05 Heat of formation + Delta-G solvation = 7.273480 kcal Electronic energy + Delta-G solvation = -36941.723317 eV Core-core repulsion = 31971.705480 eV Total energy + Delta-G solvation = -4970.017837 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 399.161 amu Computer time = 1.52 seconds Orbital eigenvalues (eV) -43.02692 -42.09036 -41.52375 -40.39424 -39.55632 -38.56856 -37.55787 -37.12085 -35.80311 -33.55764 -32.51780 -32.07674 -31.77223 -30.00534 -28.69864 -27.60463 -26.86490 -26.53837 -25.77546 -24.21742 -23.59493 -22.82289 -22.52428 -21.27853 -20.45872 -19.55320 -19.40932 -19.11800 -18.68593 -18.45616 -18.28690 -18.11364 -17.72479 -17.56978 -17.25228 -16.64840 -16.55350 -16.21217 -16.05264 -15.90703 -15.49818 -15.30830 -15.09898 -14.71535 -14.53006 -14.42178 -14.34573 -14.20205 -14.12923 -14.01925 -13.95532 -13.71811 -13.18389 -13.05604 -12.92331 -12.81727 -12.78039 -12.50474 -12.26286 -12.21124 -12.19638 -11.81482 -11.79136 -11.72917 -11.60870 -11.47209 -10.94419 -10.85566 -10.63082 -9.90919 -9.84316 -9.82814 -9.57127 -5.23699 -1.14171 -0.38911 0.37576 0.41273 0.48588 0.52431 0.97797 1.02628 1.37144 1.38793 1.64432 1.90259 1.98651 2.80511 2.87327 2.93130 3.08270 3.13223 3.34845 3.39786 3.48516 3.51597 3.53997 3.57546 3.60978 3.71606 3.76844 3.86502 3.94977 4.03231 4.08630 4.10005 4.13252 4.15328 4.22215 4.27277 4.33712 4.39127 4.48499 4.55422 4.62591 4.65025 4.66835 4.70354 4.86657 4.90504 4.99345 5.08078 5.08907 5.12684 5.36284 5.48438 5.56225 5.62483 5.69680 5.71105 6.05714 6.08389 6.37883 6.94769 6.96783 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.063 3.937 2 N -0.600 5.600 3 C 0.516 3.484 4 O -0.488 6.488 5 C 0.032 3.968 6 O -0.252 6.252 7 C 0.201 3.799 8 C -0.074 4.074 9 N 0.029 4.971 10 O -0.175 6.175 11 O -0.117 6.117 12 C 0.013 3.987 13 C -0.112 4.112 14 C -0.071 4.071 15 O -0.545 6.545 16 Si 0.690 3.310 17 C -0.031 4.031 18 C -0.208 4.208 19 C 0.125 3.875 20 H 0.091 0.909 21 C -0.131 4.131 22 C -0.072 4.072 23 H 0.095 0.905 24 C -0.072 4.072 25 C -0.117 4.117 26 C -0.117 4.117 27 C -0.124 4.124 28 C -0.118 4.118 29 C -0.117 4.117 30 C -0.138 4.138 31 H 0.065 0.935 32 H 0.084 0.916 33 H 0.071 0.929 34 H 0.100 0.900 35 H 0.101 0.899 36 H 0.166 0.834 37 H 0.082 0.918 38 H 0.388 0.612 39 H -0.248 1.248 40 H -0.251 1.251 41 H 0.141 0.859 42 H 0.155 0.845 43 H 0.096 0.904 44 H 0.078 0.922 45 H 0.122 0.878 46 H 0.122 0.878 47 H 0.121 0.879 48 H 0.122 0.878 49 H 0.119 0.881 50 H 0.082 0.918 51 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.817 0.868 1.034 11.894 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.337 5.337 3 C 0.301 3.699 4 O -0.360 6.360 5 C -0.046 4.046 6 O -0.162 6.162 7 C 0.151 3.849 8 C -0.159 4.159 9 N 0.549 4.451 10 O -0.384 6.384 11 O -0.341 6.341 12 C -0.006 4.006 13 C -0.113 4.113 14 C -0.181 4.181 15 O -0.352 6.352 16 Si 0.591 3.409 17 C -0.048 4.048 18 C -0.227 4.227 19 C 0.022 3.978 20 H 0.109 0.891 21 C -0.169 4.169 22 C -0.090 4.090 23 H 0.113 0.887 24 C -0.072 4.072 25 C -0.135 4.135 26 C -0.135 4.135 27 C -0.142 4.142 28 C -0.136 4.136 29 C -0.135 4.135 30 C -0.175 4.175 31 H 0.084 0.916 32 H 0.103 0.897 33 H 0.090 0.910 34 H 0.118 0.882 35 H 0.119 0.881 36 H 0.184 0.816 37 H 0.100 0.900 38 H 0.236 0.764 39 H -0.172 1.172 40 H -0.176 1.176 41 H 0.158 0.842 42 H 0.173 0.827 43 H 0.114 0.886 44 H 0.097 0.903 45 H 0.140 0.860 46 H 0.140 0.860 47 H 0.139 0.861 48 H 0.140 0.860 49 H 0.137 0.863 50 H 0.101 0.899 51 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -12.031 -0.151 0.996 12.073 hybrid contribution 0.455 -0.315 0.161 0.576 sum -11.576 -0.466 1.157 11.643 Atomic orbital electron populations 1.22028 0.79259 1.03729 1.02933 1.47438 1.06821 1.04768 1.74652 1.19711 0.88135 0.83989 0.78067 1.90863 1.12905 1.86388 1.45815 1.22806 0.92106 0.85371 1.04332 1.86497 1.33378 1.10419 1.85872 1.18652 0.91346 0.84236 0.90672 1.20569 0.80577 0.93983 1.20728 1.43302 1.02453 1.01004 0.98306 1.94550 1.56378 1.32762 1.54726 1.94701 1.78713 1.09409 1.51244 1.20819 0.95605 0.94838 0.89333 1.19236 0.92087 0.94611 1.05353 1.24646 1.11808 0.91162 0.90501 1.86498 1.79901 1.32306 1.36475 0.94654 0.75523 0.90137 0.80610 1.21136 0.99988 0.91712 0.91987 1.21196 0.92299 0.99289 1.09930 1.21908 0.94252 0.82300 0.99312 0.89132 1.23329 0.96442 1.01441 0.95659 1.21575 0.98633 0.94675 0.94133 0.88668 1.19678 0.98435 0.94970 0.94120 1.21006 0.99280 0.93240 0.99976 1.21181 0.99741 0.98122 0.94432 1.21204 0.98878 0.98751 0.95355 1.21183 0.98852 0.93594 0.99933 1.21055 1.00455 0.98173 0.93792 1.23498 1.00799 0.97818 0.95378 0.91610 0.89729 0.90999 0.88217 0.88124 0.81646 0.89972 0.76402 1.17204 1.17556 0.84227 0.82717 0.88563 0.90279 0.85981 0.85961 0.86054 0.86044 0.86295 0.89921 0.87909 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.31 9.74 59.85 0.58 0.27 16 2 N -0.60 0.66 3.01 -173.00 -0.52 0.13 16 3 C 0.52 0.92 7.46 -10.98 -0.08 0.84 16 4 O -0.49 -3.35 15.68 -14.35 -0.22 -3.58 16 5 C 0.03 -0.03 3.70 36.01 0.13 0.10 16 6 O -0.25 -0.86 7.68 -49.77 -0.38 -1.24 16 7 C 0.20 0.44 6.67 -39.21 -0.26 0.18 16 8 C -0.07 -0.30 6.87 -79.81 -0.55 -0.85 16 9 N 0.03 0.21 4.45 34.03 0.15 0.36 16 10 O -0.18 -1.36 18.45 -29.46 -0.54 -1.90 16 11 O -0.12 -1.09 17.24 -36.49 -0.63 -1.71 16 12 C 0.01 0.02 9.18 -39.60 -0.36 -0.34 16 13 C -0.11 -0.01 5.39 -104.60 -0.56 -0.58 16 14 C -0.07 0.16 2.79 36.01 0.10 0.26 16 15 O -0.54 0.88 12.81 -35.23 -0.45 0.43 16 16 Si 0.69 -2.58 29.85 -169.99 -5.07 -7.65 16 17 C -0.03 0.03 8.66 -39.61 -0.34 -0.31 16 18 C -0.21 0.25 9.04 -39.43 -0.36 -0.11 16 19 C 0.13 -0.07 4.09 -67.11 -0.27 -0.35 16 20 H 0.09 0.02 8.14 -51.93 -0.42 -0.40 16 21 C -0.13 -0.07 6.89 -25.91 -0.18 -0.25 16 22 C -0.07 0.07 3.76 -90.95 -0.34 -0.27 16 23 H 0.10 -0.14 7.99 -51.93 -0.41 -0.55 16 24 C -0.07 -0.03 5.29 -104.62 -0.55 -0.58 16 25 C -0.12 -0.04 8.63 -39.58 -0.34 -0.38 16 26 C -0.12 -0.07 10.05 -39.58 -0.40 -0.46 16 27 C -0.12 -0.09 10.05 -39.58 -0.40 -0.49 16 28 C -0.12 -0.09 10.05 -39.58 -0.40 -0.49 16 29 C -0.12 -0.08 9.71 -39.58 -0.38 -0.47 16 30 C -0.14 0.34 6.58 -25.92 -0.17 0.17 16 31 H 0.07 -0.37 8.14 -51.93 -0.42 -0.79 16 32 H 0.08 -0.46 5.64 -51.93 -0.29 -0.76 16 33 H 0.07 -0.49 6.25 -51.93 -0.32 -0.81 16 34 H 0.10 -0.42 6.94 -51.93 -0.36 -0.78 16 35 H 0.10 -0.40 7.63 -51.93 -0.40 -0.80 16 36 H 0.17 0.20 7.61 -52.49 -0.40 -0.20 16 37 H 0.08 -0.32 7.96 -51.93 -0.41 -0.74 16 38 H 0.39 -2.55 8.74 45.56 0.40 -2.15 16 39 H -0.25 0.27 7.05 56.52 0.40 0.67 16 40 H -0.25 0.42 7.11 56.52 0.40 0.82 16 41 H 0.14 -0.36 4.86 -52.49 -0.26 -0.62 16 42 H 0.16 -0.76 6.30 -52.49 -0.33 -1.09 16 43 H 0.10 0.06 7.73 -51.93 -0.40 -0.34 16 44 H 0.08 0.22 7.40 -51.93 -0.38 -0.16 16 45 H 0.12 -0.15 6.65 -52.49 -0.35 -0.50 16 46 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 47 H 0.12 -0.10 8.06 -52.48 -0.42 -0.52 16 48 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 49 H 0.12 -0.08 8.05 -52.49 -0.42 -0.50 16 50 H 0.08 -0.31 5.81 -51.93 -0.30 -0.61 16 51 H 0.10 -0.29 6.31 -51.93 -0.33 -0.61 16 LS Contribution 420.25 15.07 6.33 6.33 Total: 0.00 -12.65 420.25 -12.77 -25.42 By element: Atomic # 1 Polarization: -6.22 SS G_CDS: -6.29 Total: -12.51 kcal Atomic # 6 Polarization: 1.05 SS G_CDS: -5.14 Total: -4.09 kcal Atomic # 7 Polarization: 0.87 SS G_CDS: -0.37 Total: 0.50 kcal Atomic # 8 Polarization: -5.77 SS G_CDS: -2.23 Total: -8.01 kcal Atomic # 14 Polarization: -2.58 SS G_CDS: -5.07 Total: -7.65 kcal Total LS contribution 6.33 Total: 6.33 kcal Total: -12.65 -12.77 -25.42 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14797354_4549638.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.696 kcal (2) G-P(sol) polarization free energy of solvation -12.651 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.045 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.771 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.423 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.273 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds