Wall clock time and date at job start Sun Mar 7 2021 03:56:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.37936 * 120.07203 * 2 1 4 4 C 1.38386 * 120.14286 * 179.97438 * 3 2 1 5 5 C 1.50698 * 119.85140 * 180.02562 * 4 3 2 6 6 C 1.38337 * 120.29341 * 359.97438 * 4 3 2 7 7 C 1.50703 * 119.92553 * 180.02562 * 6 4 3 8 8 O 1.42898 * 109.46921 * 75.00468 * 7 6 4 9 9 Si 1.86296 * 109.46748 * 195.00170 * 7 6 4 10 10 C 1.37973 * 120.14385 * 359.78966 * 6 4 3 11 11 C 1.39556 * 119.85503 * 0.44463 * 10 6 4 12 12 C 1.47845 * 120.14847 * 179.81186 * 11 10 6 13 13 O 1.21546 * 120.00164 * 131.50811 * 12 11 10 14 14 N 1.34780 * 119.99852 * 311.50848 * 12 11 10 15 15 C 1.46504 * 119.99865 * 4.52521 * 14 12 11 16 16 C 1.46498 * 120.00170 * 184.51958 * 14 12 11 17 17 H 1.09001 * 112.84659 * 17.81952 * 16 14 12 18 18 C 1.53786 * 113.61282 * 149.12169 * 16 14 12 19 19 C 1.53786 * 87.07841 * 89.11879 * 18 16 14 20 20 H 1.09000 * 113.61656 * 270.88209 * 19 18 16 21 21 C 1.50700 * 113.61186 * 139.97583 * 19 18 16 22 22 C 1.38233 * 120.00318 * 322.23480 * 21 19 18 23 23 C 1.38232 * 119.99742 * 179.76412 * 22 21 19 24 24 C 1.38240 * 120.00236 * 0.48388 * 23 22 21 25 25 C 1.38235 * 119.99847 * 359.78723 * 24 23 22 26 26 C 1.38234 * 119.99715 * 359.96344 * 25 24 23 27 27 C 1.53777 * 113.61794 * 246.62253 * 16 14 12 28 28 H 1.08999 * 109.46992 * 274.19186 * 1 2 3 29 29 H 1.09007 * 109.46935 * 34.18871 * 1 2 3 30 30 H 1.08999 * 109.47055 * 154.19243 * 1 2 3 31 31 H 1.07997 * 119.92812 * 359.97438 * 3 2 1 32 32 H 1.09004 * 109.47158 * 89.99755 * 5 4 3 33 33 H 1.09003 * 109.47417 * 209.99247 * 5 4 3 34 34 H 1.08997 * 109.47743 * 330.00081 * 5 4 3 35 35 H 1.08995 * 109.47434 * 315.00241 * 7 6 4 36 36 H 0.96699 * 114.00767 * 60.00021 * 8 7 6 37 37 H 1.48500 * 109.99804 * 180.02562 * 9 7 6 38 38 H 1.48496 * 110.00154 * 301.31806 * 9 7 6 39 39 H 1.08001 * 120.07571 * 180.23107 * 10 6 4 40 40 H 1.08996 * 109.46839 * 208.85736 * 15 14 12 41 41 H 1.08997 * 109.47314 * 88.85317 * 15 14 12 42 42 H 1.09003 * 109.47227 * 328.85544 * 15 14 12 43 43 H 1.08998 * 113.61329 * 203.66666 * 18 16 14 44 44 H 1.08996 * 113.61578 * 334.57512 * 18 16 14 45 45 H 1.07994 * 120.00074 * 359.97438 * 22 21 19 46 46 H 1.08005 * 119.99885 * 180.25155 * 23 22 21 47 47 H 1.08001 * 120.00048 * 179.77320 * 24 23 22 48 48 H 1.07991 * 119.99893 * 179.97438 * 25 24 23 49 49 H 1.08002 * 119.99693 * 179.97438 * 26 25 24 50 50 H 1.08999 * 113.61296 * 25.42891 * 27 16 14 51 51 H 1.08998 * 113.61458 * 156.33294 * 27 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1982 1.1937 0.0000 4 6 3.5820 1.1954 0.0005 5 6 4.3305 2.5034 0.0011 6 6 4.2813 0.0018 0.0016 7 6 5.7883 0.0133 0.0028 8 8 6.2609 0.3661 1.3044 9 14 6.4225 -1.6787 -0.4506 10 6 3.6021 -1.1992 0.0065 11 6 2.2066 -1.2080 0.0010 12 6 1.4722 -2.4912 0.0021 13 8 0.5617 -2.6697 0.7873 14 7 1.8123 -3.4630 -0.8677 15 6 2.9716 -3.2871 -1.7460 16 6 1.0227 -4.6952 -0.9349 17 1 0.0375 -4.5918 -0.4802 18 6 0.9938 -5.3327 -2.3340 19 6 2.2597 -6.1032 -1.9230 20 1 3.1853 -5.5714 -2.1431 21 6 2.2772 -7.5331 -2.3987 22 6 1.1104 -8.2743 -2.4033 23 6 1.1257 -9.5844 -2.8442 24 6 2.3096 -10.1563 -3.2712 25 6 3.4774 -9.4167 -3.2613 26 6 3.4612 -8.1051 -2.8252 27 6 1.7888 -5.9440 -0.4676 28 1 -0.3633 0.0751 1.0249 29 1 -0.3633 0.8501 -0.5775 30 1 -0.3633 -0.9252 -0.4474 31 1 1.6582 2.1290 -0.0004 32 1 4.5106 2.8185 1.0289 33 1 5.2837 2.3768 -0.5123 34 1 3.7388 3.2609 -0.5127 35 1 6.1467 0.7424 -0.7239 36 1 5.9797 -0.2406 2.0029 37 1 7.9075 -1.6807 -0.4525 38 1 5.9149 -2.6868 0.5143 39 1 4.1491 -2.1304 0.0111 40 1 2.8183 -3.8493 -2.6670 41 1 3.8673 -3.6513 -1.2427 42 1 3.0919 -2.2296 -1.9815 43 1 0.1286 -5.9735 -2.5040 44 1 1.1595 -4.6203 -3.1421 45 1 0.1864 -7.8290 -2.0656 46 1 0.2133 -10.1623 -2.8516 47 1 2.3222 -11.1809 -3.6122 48 1 4.4024 -9.8636 -3.5944 49 1 4.3737 -7.5274 -2.8171 50 1 2.5963 -5.7249 0.2309 51 1 1.1409 -6.7518 -0.1274 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14797354_9599494.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 03:56:16 Heat of formation + Delta-G solvation = 22.202355 kcal Electronic energy + Delta-G solvation = -31439.859002 eV Core-core repulsion = 27464.649538 eV Total energy + Delta-G solvation = -3975.209464 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.183 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -42.14850 -41.13429 -39.94958 -38.81053 -37.72615 -35.63254 -34.49448 -33.34260 -31.95163 -31.65920 -29.38151 -28.63113 -28.56746 -26.79185 -26.05386 -25.30447 -23.79565 -23.51895 -22.94152 -21.82134 -20.64966 -19.72325 -18.82201 -18.13929 -17.56050 -17.50511 -17.07131 -16.67963 -16.45136 -16.18645 -16.17846 -15.82971 -15.60660 -15.10739 -15.07084 -14.75382 -14.70201 -14.37120 -14.22201 -14.18499 -14.03429 -13.98201 -13.96097 -13.69412 -13.38855 -13.15269 -13.12654 -13.02561 -12.80446 -12.74447 -12.57166 -12.49380 -12.16959 -11.92504 -11.82558 -11.76972 -11.65049 -11.22172 -10.78437 -10.64529 -9.86694 -9.82856 -9.76414 -9.60212 -9.51735 -5.12595 -0.09684 0.16209 0.42700 0.49819 1.15712 1.45054 1.64436 1.83026 1.85281 2.53419 2.82611 3.27973 3.29438 3.44684 3.57419 3.61585 3.65052 3.67275 3.76355 3.89301 3.96589 4.00583 4.07630 4.10230 4.15852 4.16896 4.23784 4.32797 4.43035 4.47475 4.52904 4.53466 4.53924 4.60660 4.65691 4.66700 4.68453 4.71168 4.75860 4.80180 4.85664 4.90344 4.94817 5.06195 5.08233 5.09546 5.11782 5.14142 5.22692 5.40666 5.49114 5.54671 5.57872 5.63809 5.73047 5.79894 6.09760 6.27182 6.31846 7.10784 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.020 4.020 3 C -0.127 4.127 4 C -0.029 4.029 5 C -0.120 4.120 6 C -0.132 4.132 7 C -0.070 4.070 8 O -0.525 6.525 9 Si 0.676 3.324 10 C -0.085 4.085 11 C -0.135 4.135 12 C 0.566 3.434 13 O -0.524 6.524 14 N -0.593 5.593 15 C 0.058 3.942 16 C 0.120 3.880 17 H 0.109 0.891 18 C -0.140 4.140 19 C -0.079 4.079 20 H 0.103 0.897 21 C -0.071 4.071 22 C -0.117 4.117 23 C -0.117 4.117 24 C -0.125 4.125 25 C -0.118 4.118 26 C -0.117 4.117 27 C -0.139 4.139 28 H 0.081 0.919 29 H 0.070 0.930 30 H 0.070 0.930 31 H 0.133 0.867 32 H 0.079 0.921 33 H 0.073 0.927 34 H 0.068 0.932 35 H 0.121 0.879 36 H 0.376 0.624 37 H -0.253 1.253 38 H -0.258 1.258 39 H 0.132 0.868 40 H 0.085 0.915 41 H 0.058 0.942 42 H 0.083 0.917 43 H 0.100 0.900 44 H 0.079 0.921 45 H 0.122 0.878 46 H 0.122 0.878 47 H 0.121 0.879 48 H 0.121 0.879 49 H 0.120 0.880 50 H 0.073 0.927 51 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.004 0.132 -4.895 4.998 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C -0.021 4.021 3 C -0.145 4.145 4 C -0.029 4.029 5 C -0.176 4.176 6 C -0.132 4.132 7 C -0.180 4.180 8 O -0.332 6.332 9 Si 0.577 3.423 10 C -0.103 4.103 11 C -0.138 4.138 12 C 0.355 3.645 13 O -0.400 6.400 14 N -0.326 5.326 15 C -0.085 4.085 16 C 0.016 3.984 17 H 0.127 0.873 18 C -0.178 4.178 19 C -0.097 4.097 20 H 0.121 0.879 21 C -0.071 4.071 22 C -0.135 4.135 23 C -0.135 4.135 24 C -0.143 4.143 25 C -0.136 4.136 26 C -0.135 4.135 27 C -0.178 4.178 28 H 0.100 0.900 29 H 0.089 0.911 30 H 0.089 0.911 31 H 0.151 0.849 32 H 0.097 0.903 33 H 0.092 0.908 34 H 0.087 0.913 35 H 0.138 0.862 36 H 0.224 0.776 37 H -0.177 1.177 38 H -0.183 1.183 39 H 0.150 0.850 40 H 0.104 0.896 41 H 0.077 0.923 42 H 0.101 0.899 43 H 0.118 0.882 44 H 0.098 0.902 45 H 0.140 0.860 46 H 0.140 0.860 47 H 0.139 0.861 48 H 0.140 0.860 49 H 0.138 0.862 50 H 0.091 0.909 51 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 1.262 -0.168 -4.559 4.733 hybrid contribution -0.003 -0.012 1.174 1.174 sum 1.259 -0.180 -3.385 3.616 Atomic orbital electron populations 1.20900 0.90117 1.03121 1.03420 1.19951 0.96548 0.91350 0.94263 1.20959 0.93390 0.97695 1.02420 1.19954 0.93354 0.95132 0.94485 1.20911 1.00180 0.93328 1.03226 1.19967 0.95956 0.92708 1.04602 1.24944 0.91776 1.12773 0.88479 1.86609 1.76153 1.54129 1.16263 0.95317 0.81397 0.75236 0.90344 1.21290 0.93112 0.97953 0.97967 1.19560 0.93336 0.92937 1.07944 1.18325 0.82990 0.83078 0.80148 1.90808 1.30364 1.80739 1.38076 1.47441 1.29945 1.16726 1.38457 1.22279 0.87614 1.03670 0.94925 1.21936 0.95920 0.83079 0.97469 0.87334 1.23495 0.98489 0.99097 0.96708 1.21801 0.99139 0.92298 0.96505 0.87910 1.19695 0.93466 0.95190 0.98786 1.21016 0.97901 0.94342 1.00273 1.21181 0.98204 0.95293 0.98859 1.21201 0.92918 1.00027 1.00109 1.21183 0.98341 0.94472 0.99597 1.21065 0.97544 0.95420 0.99466 1.23472 1.00697 0.97841 0.95774 0.90014 0.91136 0.91074 0.84950 0.90285 0.90800 0.91263 0.86155 0.77609 1.17731 1.18303 0.85029 0.89627 0.92306 0.89885 0.88166 0.90225 0.86010 0.86032 0.86112 0.86048 0.86155 0.90866 0.88664 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.12 9.14 36.01 0.33 0.21 16 2 C -0.02 -0.03 5.91 -104.23 -0.62 -0.64 16 3 C -0.13 -0.04 9.35 -39.64 -0.37 -0.41 16 4 C -0.03 0.00 5.89 -104.53 -0.62 -0.62 16 5 C -0.12 0.14 9.53 36.00 0.34 0.48 16 6 C -0.13 0.03 5.25 -104.68 -0.55 -0.52 16 7 C -0.07 0.07 2.04 36.01 0.07 0.14 16 8 O -0.53 -0.29 12.80 -35.23 -0.45 -0.74 16 9 Si 0.68 -1.11 30.25 -169.99 -5.14 -6.25 16 10 C -0.09 -0.01 6.29 -39.19 -0.25 -0.25 16 11 C -0.13 -0.22 4.91 -104.97 -0.52 -0.74 16 12 C 0.57 1.62 6.34 -12.33 -0.08 1.54 16 13 O -0.52 -3.24 15.10 5.33 0.08 -3.16 16 14 N -0.59 -0.13 3.08 -174.11 -0.54 -0.66 16 15 C 0.06 -0.15 7.39 59.85 0.44 0.29 16 16 C 0.12 -0.02 4.37 -67.12 -0.29 -0.31 16 17 H 0.11 0.14 7.38 -51.93 -0.38 -0.24 16 18 C -0.14 0.26 6.65 -25.91 -0.17 0.09 16 19 C -0.08 0.12 3.34 -90.95 -0.30 -0.18 16 20 H 0.10 -0.27 5.79 -51.93 -0.30 -0.57 16 21 C -0.07 0.01 5.29 -104.62 -0.55 -0.55 16 22 C -0.12 -0.01 8.60 -39.59 -0.34 -0.35 16 23 C -0.12 -0.04 10.05 -39.58 -0.40 -0.44 16 24 C -0.12 -0.05 10.05 -39.58 -0.40 -0.45 16 25 C -0.12 -0.04 10.05 -39.58 -0.40 -0.43 16 26 C -0.12 -0.01 9.71 -39.58 -0.38 -0.39 16 27 C -0.14 0.07 7.29 -25.92 -0.19 -0.12 16 28 H 0.08 0.13 8.14 -51.93 -0.42 -0.30 16 29 H 0.07 -0.05 8.11 -51.93 -0.42 -0.48 16 30 H 0.07 0.16 6.45 -51.93 -0.34 -0.18 16 31 H 0.13 -0.17 8.06 -52.49 -0.42 -0.60 16 32 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 33 H 0.07 -0.11 6.22 -51.93 -0.32 -0.43 16 34 H 0.07 -0.15 8.08 -51.93 -0.42 -0.57 16 35 H 0.12 -0.24 6.48 -51.93 -0.34 -0.57 16 36 H 0.38 -0.65 8.70 45.56 0.40 -0.25 16 37 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 38 H -0.26 -0.07 6.67 56.52 0.38 0.31 16 39 H 0.13 -0.13 3.17 -52.49 -0.17 -0.29 16 40 H 0.09 -0.34 4.93 -51.93 -0.26 -0.60 16 41 H 0.06 -0.21 7.22 -51.93 -0.38 -0.59 16 42 H 0.08 -0.26 5.96 -51.93 -0.31 -0.57 16 43 H 0.10 -0.22 6.32 -51.93 -0.33 -0.54 16 44 H 0.08 -0.18 6.95 -51.93 -0.36 -0.54 16 45 H 0.12 -0.16 6.68 -52.49 -0.35 -0.51 16 46 H 0.12 -0.14 8.06 -52.48 -0.42 -0.57 16 47 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 48 H 0.12 -0.15 8.06 -52.49 -0.42 -0.58 16 49 H 0.12 -0.19 8.06 -52.49 -0.42 -0.61 16 50 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 51 H 0.09 -0.05 7.71 -51.93 -0.40 -0.45 16 LS Contribution 393.30 15.07 5.93 5.93 Total: 0.00 -7.06 393.30 -12.63 -19.69 By element: Atomic # 1 Polarization: -3.87 SS G_CDS: -7.27 Total: -11.15 kcal Atomic # 6 Polarization: 1.58 SS G_CDS: -5.23 Total: -3.66 kcal Atomic # 7 Polarization: -0.13 SS G_CDS: -0.54 Total: -0.66 kcal Atomic # 8 Polarization: -3.53 SS G_CDS: -0.37 Total: -3.90 kcal Atomic # 14 Polarization: -1.11 SS G_CDS: -5.14 Total: -6.25 kcal Total LS contribution 5.93 Total: 5.93 kcal Total: -7.06 -12.63 -19.69 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14797354_9599494.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.896 kcal (2) G-P(sol) polarization free energy of solvation -7.064 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.832 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.630 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.694 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.202 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds