Wall clock time and date at job start Sun Mar 7 2021 00:31:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86295 * 109.47491 * 2 1 4 4 C 1.50706 * 109.47093 * 239.99795 * 2 1 3 5 5 C 1.37948 * 119.91860 * 300.25627 * 4 2 1 6 6 C 1.39601 * 119.86882 * 180.25387 * 5 4 2 7 7 C 1.47837 * 120.13882 * 179.77315 * 6 5 4 8 8 O 1.21551 * 120.00532 * 359.71788 * 7 6 5 9 9 N 1.34779 * 120.00174 * 179.72439 * 7 6 5 10 10 C 1.46500 * 120.00290 * 179.97438 * 9 7 6 11 11 H 1.08997 * 112.84770 * 336.19451 * 10 9 7 12 12 C 1.53779 * 113.69294 * 107.46217 * 10 9 7 13 13 C 1.53771 * 87.08321 * 139.99186 * 12 10 9 14 14 H 1.09002 * 113.69237 * 89.12563 * 13 12 10 15 15 C 1.52999 * 113.61697 * 220.02077 * 13 12 10 16 16 N 1.46502 * 109.47056 * 272.49988 * 15 13 12 17 17 C 1.35315 * 125.87191 * 125.00095 * 16 15 13 18 18 C 1.35344 * 106.17731 * 179.73450 * 17 16 15 19 19 N 1.33776 * 106.49718 * 359.97438 * 18 17 16 20 20 N 1.28633 * 108.88517 * 359.97438 * 19 18 17 21 21 C 1.53784 * 87.08409 * 334.56760 * 13 12 10 22 22 C 1.39546 * 119.71714 * 359.49278 * 6 5 4 23 23 C 1.38072 * 119.84539 * 0.25282 * 22 6 5 24 24 Br 1.89101 * 119.93543 * 179.97438 * 23 22 6 25 25 C 1.38358 * 119.91904 * 120.00470 * 4 2 1 26 26 H 0.96696 * 114.00234 * 60.00308 * 1 2 3 27 27 H 1.09004 * 109.47166 * 119.99969 * 2 1 3 28 28 H 1.48504 * 109.99726 * 298.68120 * 3 2 1 29 29 H 1.48502 * 110.00028 * 59.99463 * 3 2 1 30 30 H 1.07997 * 120.06720 * 0.02562 * 5 4 2 31 31 H 0.97001 * 119.99710 * 359.97438 * 9 7 6 32 32 H 1.09004 * 113.61194 * 25.44442 * 12 10 9 33 33 H 1.08996 * 113.61514 * 254.54336 * 12 10 9 34 34 H 1.09004 * 109.47423 * 152.49946 * 15 13 12 35 35 H 1.09002 * 109.47147 * 32.49877 * 15 13 12 36 36 H 1.07998 * 126.90914 * 359.71348 * 17 16 15 37 37 H 1.08000 * 126.75529 * 179.97438 * 18 17 16 38 38 H 1.08994 * 113.61304 * 139.97695 * 21 13 12 39 39 H 1.08999 * 113.61721 * 270.80238 * 21 13 12 40 40 H 1.08004 * 120.07700 * 180.27740 * 22 6 5 41 41 H 1.07993 * 119.86227 * 0.02562 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 1.5927 -2.0297 -1.4497 6 6 2.0629 -2.6883 -2.5872 7 6 1.7078 -4.1035 -2.8255 8 8 1.0092 -4.6976 -2.0277 9 7 2.1588 -4.7351 -3.9275 10 6 1.8074 -6.1376 -4.1634 11 1 1.5546 -6.6705 -3.2468 12 6 0.7839 -6.3365 -5.2938 13 6 1.6077 -7.5640 -5.7172 14 1 1.3013 -8.4877 -5.2263 15 6 1.7474 -7.7151 -7.2333 16 7 0.6089 -8.4750 -7.7553 17 6 -0.2297 -8.0722 -8.7379 18 6 -1.1239 -9.0744 -8.9049 19 7 -0.7927 -10.0290 -8.0282 20 7 0.2386 -9.6437 -7.3629 21 6 2.8162 -6.8844 -5.0519 22 6 2.8648 -2.0036 -3.5012 23 6 3.1922 -0.6818 -3.2728 24 35 4.2792 0.2484 -4.5094 25 6 2.7267 -0.0365 -2.1401 26 1 -0.3933 0.4416 -0.7650 27 1 1.7923 -0.5138 0.8900 28 1 1.5879 2.4585 -1.2243 29 1 1.5615 2.4679 1.2084 30 1 0.9680 -2.5529 -0.7410 31 1 2.7161 -4.2610 -4.5643 32 1 0.7862 -5.5337 -6.0311 33 1 -0.2165 -6.5834 -4.9386 34 1 2.6728 -8.2439 -7.4620 35 1 1.7688 -6.7285 -7.6963 36 1 -0.1931 -7.1386 -9.2796 37 1 -1.9437 -9.0987 -9.6076 38 1 3.4563 -7.5737 -4.5014 39 1 3.3749 -6.2325 -5.7234 40 1 3.2281 -2.5062 -4.3855 41 1 2.9859 0.9972 -1.9655 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14928172_12335870.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:31:32 Heat of formation + Delta-G solvation = 98.654330 kcal Electronic energy + Delta-G solvation = -26831.459269 eV Core-core repulsion = 22762.770654 eV Total energy + Delta-G solvation = -4068.688615 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 393.047 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -44.16272 -41.81096 -40.76947 -39.45685 -37.87960 -35.92232 -34.61371 -33.72736 -32.96833 -31.95195 -30.58017 -29.68958 -27.17276 -27.07078 -26.09227 -24.21527 -23.57869 -22.93212 -22.35871 -21.67551 -20.81679 -19.26078 -18.79612 -18.07583 -17.85851 -17.58800 -17.22351 -16.66778 -16.56002 -16.49280 -16.08521 -15.86666 -15.80286 -15.22877 -15.11764 -15.03496 -14.84882 -14.33478 -14.23890 -13.91431 -13.79313 -13.38887 -13.25611 -13.09894 -12.74525 -12.50220 -12.36856 -12.19360 -12.07088 -11.90062 -11.83144 -11.79575 -11.57126 -11.19666 -10.97906 -10.80065 -10.44986 -10.31869 -10.23249 -10.01978 -5.11775 -0.61081 -0.28094 0.29957 0.65340 1.07614 1.31216 1.43973 1.47521 1.69432 1.80352 1.87868 2.38465 3.02528 3.09110 3.11870 3.18176 3.26386 3.29903 3.46939 3.54342 3.64733 3.70395 3.73459 3.81704 3.86266 4.02750 4.10614 4.12317 4.16124 4.29691 4.30835 4.41380 4.44834 4.48639 4.61961 4.63544 4.74449 4.77485 4.82608 4.93577 4.99405 5.22971 5.25034 5.32153 5.58886 6.21417 6.23140 6.96486 7.59600 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.524 6.524 2 C -0.074 4.074 3 Si 0.680 3.320 4 C -0.117 4.117 5 C -0.017 4.017 6 C -0.129 4.129 7 C 0.563 3.437 8 O -0.524 6.524 9 N -0.716 5.716 10 C 0.126 3.874 11 H 0.122 0.878 12 C -0.149 4.149 13 C -0.124 4.124 14 H 0.115 0.885 15 C 0.127 3.873 16 N -0.289 5.289 17 C -0.052 4.052 18 C -0.051 4.051 19 N -0.271 5.271 20 N -0.084 5.084 21 C -0.135 4.135 22 C -0.054 4.054 23 C -0.095 4.095 24 Br -0.032 7.032 25 C -0.063 4.063 26 H 0.378 0.622 27 H 0.126 0.874 28 H -0.255 1.255 29 H -0.250 1.250 30 H 0.149 0.851 31 H 0.401 0.599 32 H 0.088 0.912 33 H 0.077 0.923 34 H 0.104 0.896 35 H 0.107 0.893 36 H 0.190 0.810 37 H 0.190 0.810 38 H 0.087 0.913 39 H 0.093 0.907 40 H 0.138 0.862 41 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.713 5.537 -3.727 8.785 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.330 6.330 2 C -0.184 4.184 3 Si 0.580 3.420 4 C -0.118 4.118 5 C -0.036 4.036 6 C -0.133 4.133 7 C 0.350 3.650 8 O -0.400 6.400 9 N -0.367 5.367 10 C 0.022 3.978 11 H 0.140 0.860 12 C -0.188 4.188 13 C -0.143 4.143 14 H 0.133 0.867 15 C 0.006 3.994 16 N -0.083 5.083 17 C -0.202 4.202 18 C -0.208 4.208 19 N -0.137 5.137 20 N -0.064 5.064 21 C -0.173 4.173 22 C -0.074 4.074 23 C -0.174 4.174 24 Br 0.054 6.946 25 C -0.082 4.082 26 H 0.225 0.775 27 H 0.144 0.856 28 H -0.180 1.180 29 H -0.175 1.175 30 H 0.167 0.833 31 H 0.237 0.763 32 H 0.107 0.893 33 H 0.096 0.904 34 H 0.122 0.878 35 H 0.125 0.875 36 H 0.207 0.793 37 H 0.207 0.793 38 H 0.106 0.894 39 H 0.111 0.889 40 H 0.156 0.844 41 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 5.794 4.819 -2.088 7.820 hybrid contribution -1.141 0.915 -1.550 2.132 sum 4.653 5.734 -3.638 8.232 Atomic orbital electron populations 1.86648 1.17150 1.79878 1.49353 1.25066 0.84362 1.11087 0.97881 0.95097 0.91598 0.74239 0.81074 1.20335 0.99203 0.94824 0.97459 1.21315 0.94367 0.92903 0.95052 1.19954 1.01863 0.94248 0.97209 1.18149 0.79680 0.85954 0.81260 1.90837 1.36926 1.66975 1.45255 1.45869 1.53665 1.12774 1.24434 1.22485 0.95601 0.81173 0.98569 0.86004 1.23611 0.99606 0.97030 0.98518 1.22741 0.98469 1.00033 0.93104 0.86688 1.22178 0.86258 0.96154 0.94854 1.47498 1.22436 1.13492 1.24890 1.23710 0.95335 1.03842 0.97353 1.23686 1.02869 0.91634 1.02638 1.75169 1.06951 1.25006 1.06556 1.78306 1.10593 0.96516 1.20946 1.23371 0.96346 0.99280 0.98341 1.21264 0.95236 0.92539 0.98383 1.21644 1.02972 0.95614 0.97182 1.96851 1.65653 1.75455 1.56682 1.21228 0.95125 0.99996 0.91900 0.77468 0.85602 1.17978 1.17455 0.83343 0.76336 0.89307 0.90412 0.87784 0.87454 0.79336 0.79311 0.89396 0.88865 0.84438 0.84004 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.11 12.76 -35.23 -0.45 -0.56 16 2 C -0.07 0.11 2.82 36.01 0.10 0.21 16 3 Si 0.68 -1.44 29.78 -169.99 -5.06 -6.51 16 4 C -0.12 0.15 5.39 -104.68 -0.56 -0.42 16 5 C -0.02 0.00 9.15 -39.18 -0.36 -0.36 16 6 C -0.13 0.07 5.87 -104.97 -0.62 -0.55 16 7 C 0.56 0.44 7.77 -12.33 -0.10 0.35 16 8 O -0.52 -2.55 15.95 5.32 0.08 -2.46 16 9 N -0.72 1.78 5.31 -53.96 -0.29 1.50 16 10 C 0.13 -0.30 4.24 -67.12 -0.28 -0.59 16 11 H 0.12 -0.02 7.46 -51.93 -0.39 -0.41 16 12 C -0.15 0.41 7.43 -25.92 -0.19 0.22 16 13 C -0.12 0.42 3.84 -89.81 -0.34 0.08 16 14 H 0.11 -0.15 7.92 -51.93 -0.41 -0.56 16 15 C 0.13 -0.51 6.29 -4.04 -0.03 -0.53 16 16 N -0.29 0.02 3.44 -61.26 -0.21 -0.19 16 17 C -0.05 0.06 11.57 -17.05 -0.20 -0.14 16 18 C -0.05 -0.06 12.05 -17.74 -0.21 -0.28 16 19 N -0.27 -1.34 12.41 30.23 0.38 -0.97 16 20 N -0.08 -0.32 12.77 60.35 0.77 0.45 16 21 C -0.13 0.65 7.39 -25.92 -0.19 0.46 16 22 C -0.05 0.12 9.28 -39.15 -0.36 -0.24 16 23 C -0.09 0.16 6.22 -39.57 -0.25 -0.09 16 24 Br -0.03 0.05 33.69 -68.01 -2.29 -2.24 16 25 C -0.06 0.11 8.41 -39.47 -0.33 -0.22 16 26 H 0.38 -1.01 8.70 45.56 0.40 -0.61 16 27 H 0.13 -0.28 7.96 -51.93 -0.41 -0.69 16 28 H -0.26 0.09 7.11 56.52 0.40 0.49 16 29 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 30 H 0.15 0.18 7.65 -52.49 -0.40 -0.22 16 31 H 0.40 -2.13 6.76 -40.82 -0.28 -2.40 16 32 H 0.09 -0.36 7.90 -51.93 -0.41 -0.77 16 33 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 34 H 0.10 -0.50 8.14 -51.93 -0.42 -0.92 16 35 H 0.11 -0.72 7.77 -51.93 -0.40 -1.13 16 36 H 0.19 -0.96 8.06 -52.49 -0.42 -1.39 16 37 H 0.19 -0.32 8.06 -52.49 -0.42 -0.75 16 38 H 0.09 -0.40 8.14 -51.93 -0.42 -0.82 16 39 H 0.09 -0.63 8.08 -51.93 -0.42 -1.05 16 40 H 0.14 -0.67 6.41 -52.48 -0.34 -1.01 16 41 H 0.14 -0.44 4.86 -52.49 -0.26 -0.70 16 LS Contribution 370.04 15.07 5.58 5.58 Total: 0.00 -10.79 370.04 -10.05 -20.83 By element: Atomic # 1 Polarization: -8.70 SS G_CDS: -4.63 Total: -13.32 kcal Atomic # 6 Polarization: 1.83 SS G_CDS: -3.92 Total: -2.09 kcal Atomic # 7 Polarization: 0.13 SS G_CDS: 0.65 Total: 0.78 kcal Atomic # 8 Polarization: -2.66 SS G_CDS: -0.36 Total: -3.03 kcal Atomic # 14 Polarization: -1.44 SS G_CDS: -5.06 Total: -6.51 kcal Atomic # 35 Polarization: 0.05 SS G_CDS: -2.29 Total: -2.24 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -10.79 -10.05 -20.83 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_12335870.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 119.486 kcal (2) G-P(sol) polarization free energy of solvation -10.786 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 108.700 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.046 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.832 kcal (6) G-S(sol) free energy of system = (1) + (5) 98.654 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds