Wall clock time and date at job start Sun Mar 7 2021 00:31:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86295 * 109.46915 * 2 1 4 4 C 1.50698 * 109.47321 * 239.99522 * 2 1 3 5 5 C 1.38401 * 119.82432 * 119.72436 * 4 2 1 6 6 C 1.37889 * 120.17204 * 179.72341 * 5 4 2 7 7 C 1.39840 * 119.82278 * 0.55351 * 6 5 4 8 8 C 1.47213 * 120.17050 * 179.74374 * 7 6 5 9 9 C 1.34809 * 119.99664 * 359.97438 * 8 7 6 10 10 C 1.46436 * 119.99704 * 179.97438 * 9 8 7 11 11 O 1.21692 * 119.99579 * 0.02562 * 10 9 8 12 12 N 1.34773 * 119.99580 * 180.02562 * 10 9 8 13 13 C 1.46503 * 119.99225 * 180.02562 * 12 10 9 14 14 H 1.08994 * 112.85400 * 25.33675 * 13 12 10 15 15 C 1.53790 * 113.61044 * 156.53088 * 13 12 10 16 16 C 1.53779 * 87.07863 * 139.97751 * 15 13 12 17 17 H 1.08999 * 113.61101 * 89.11823 * 16 15 13 18 18 C 1.53001 * 113.61296 * 220.01575 * 16 15 13 19 19 N 1.46494 * 109.47331 * 185.00518 * 18 16 15 20 20 C 1.35307 * 125.87415 * 125.00172 * 19 18 16 21 21 C 1.35352 * 106.17905 * 180.02562 * 20 19 18 22 22 N 1.33766 * 106.49617 * 359.97438 * 21 20 19 23 23 N 1.28635 * 108.88461 * 359.73888 * 22 21 20 24 24 C 1.53781 * 113.61211 * 254.13042 * 13 12 10 25 25 C 1.39840 * 119.66138 * 359.72486 * 7 6 5 26 26 C 1.37892 * 119.82392 * 359.97438 * 25 7 6 27 27 H 0.96696 * 114.00036 * 60.00219 * 1 2 3 28 28 H 1.09001 * 109.47103 * 119.99412 * 2 1 3 29 29 H 1.48504 * 110.00018 * 298.67819 * 3 2 1 30 30 H 1.48496 * 110.00262 * 59.99721 * 3 2 1 31 31 H 1.08002 * 119.91520 * 0.02562 * 5 4 2 32 32 H 1.07999 * 120.09372 * 180.27808 * 6 5 4 33 33 H 1.08000 * 119.99847 * 179.97438 * 8 7 6 34 34 H 1.07999 * 120.00366 * 0.02562 * 9 8 7 35 35 H 0.96996 * 120.00145 * 359.97438 * 12 10 9 36 36 H 1.09000 * 113.60786 * 254.52464 * 15 13 12 37 37 H 1.08999 * 113.61520 * 25.34480 * 15 13 12 38 38 H 1.09004 * 109.47179 * 305.00359 * 18 16 15 39 39 H 1.08997 * 109.47247 * 65.00282 * 18 16 15 40 40 H 1.08000 * 126.90863 * 0.02562 * 20 19 18 41 41 H 1.08002 * 126.75227 * 179.97438 * 21 20 19 42 42 H 1.08996 * 113.61850 * 334.57756 * 24 13 12 43 43 H 1.09002 * 113.61324 * 105.47550 * 24 13 12 44 44 H 1.07996 * 120.08780 * 179.97438 * 25 7 6 45 45 H 1.07994 * 119.91315 * 179.97438 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.7222 -0.0328 -2.1419 6 6 3.1905 -0.6775 -3.2673 7 6 2.8548 -2.0163 -3.4920 8 6 3.3459 -2.7104 -4.6938 9 6 4.1209 -2.0552 -5.5812 10 6 4.6099 -2.7458 -6.7763 11 8 4.3162 -3.9110 -6.9685 12 7 5.3850 -2.0909 -7.6632 13 6 5.8737 -2.7818 -8.8591 14 1 5.2360 -3.6137 -9.1577 15 6 6.2306 -1.8332 -10.0158 16 6 7.4463 -2.7377 -10.2782 17 1 7.2396 -3.5584 -10.9651 18 6 8.7179 -1.9663 -10.6375 19 7 9.7815 -2.9123 -10.9839 20 6 10.4921 -2.9196 -12.1353 21 6 11.3607 -3.9528 -12.0358 22 7 11.1423 -4.5192 -10.8439 23 7 10.2046 -3.8758 -10.2427 24 6 7.3673 -3.1424 -8.7950 25 6 2.0506 -2.6925 -2.5693 26 6 1.5953 -2.0357 -1.4456 27 1 -0.3933 0.4417 -0.7650 28 1 1.7924 -0.5137 0.8900 29 1 1.5879 2.4585 -1.2243 30 1 1.5614 2.4679 1.2084 31 1 2.9772 1.0023 -1.9689 32 1 3.8111 -0.1488 -3.9755 33 1 3.0854 -3.7445 -4.8644 34 1 4.3818 -1.0212 -5.4103 35 1 5.6187 -1.1621 -7.5100 36 1 5.5004 -1.8375 -10.8250 37 1 6.4953 -0.8273 -9.6898 38 1 8.5195 -1.3150 -11.4887 39 1 9.0308 -1.3642 -9.7845 40 1 10.3872 -2.2380 -12.9665 41 1 12.0873 -4.2595 -12.7737 42 1 7.9447 -2.4957 -8.1345 43 1 7.5534 -4.2021 -8.6201 44 1 1.7869 -3.7263 -2.7362 45 1 0.9738 -2.5564 -0.7322 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14928172_12360594.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:31:40 Heat of formation + Delta-G solvation = 107.439115 kcal Electronic energy + Delta-G solvation = -27069.410826 eV Core-core repulsion = 23057.157392 eV Total energy + Delta-G solvation = -4012.253435 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 341.153 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -44.13982 -41.29941 -40.71184 -39.60092 -37.93713 -35.83289 -35.10152 -34.22850 -32.31025 -31.92277 -31.35547 -29.66033 -27.31976 -26.94018 -25.22192 -24.16101 -23.66761 -23.44097 -22.39846 -21.78531 -21.24718 -20.26226 -18.93441 -18.74730 -18.16842 -17.62487 -17.16650 -16.91072 -16.63807 -16.34210 -16.21653 -16.03570 -15.84482 -15.73838 -15.34996 -15.21943 -14.98516 -14.62088 -14.44370 -14.16392 -13.90542 -13.88404 -13.67799 -13.35682 -13.24243 -13.06681 -12.59978 -12.42965 -12.30891 -12.16382 -12.13111 -11.87826 -11.68578 -11.54368 -11.39009 -11.04501 -10.90176 -10.67804 -10.29805 -10.10291 -10.07836 -9.32493 -5.03543 -0.60835 0.29178 0.67312 0.85640 1.20679 1.33900 1.51969 1.71443 1.89741 2.13299 2.24479 2.73228 3.05434 3.20973 3.27465 3.35877 3.47623 3.49047 3.57577 3.62923 3.71506 3.79564 3.82134 3.87494 3.98485 4.07602 4.13729 4.14708 4.23657 4.32169 4.35894 4.44475 4.47107 4.50960 4.55772 4.71463 4.74780 4.79783 4.87144 4.98535 4.99916 5.05102 5.08281 5.25277 5.29056 5.38408 5.47013 5.53043 5.61686 5.79598 6.31791 6.45782 7.21642 7.62325 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.078 4.078 3 Si 0.685 3.315 4 C -0.106 4.106 5 C -0.119 4.119 6 C -0.095 4.095 7 C -0.073 4.073 8 C -0.014 4.014 9 C -0.216 4.216 10 C 0.549 3.451 11 O -0.541 6.541 12 N -0.717 5.717 13 C 0.124 3.876 14 H 0.117 0.883 15 C -0.135 4.135 16 C -0.122 4.122 17 H 0.103 0.897 18 C 0.126 3.874 19 N -0.291 5.291 20 C -0.054 4.054 21 C -0.051 4.051 22 N -0.273 5.273 23 N -0.078 5.078 24 C -0.138 4.138 25 C -0.092 4.092 26 C -0.095 4.095 27 H 0.376 0.624 28 H 0.120 0.880 29 H -0.260 1.260 30 H -0.256 1.256 31 H 0.131 0.869 32 H 0.132 0.868 33 H 0.138 0.862 34 H 0.131 0.869 35 H 0.402 0.598 36 H 0.083 0.917 37 H 0.093 0.907 38 H 0.109 0.891 39 H 0.102 0.898 40 H 0.190 0.810 41 H 0.190 0.810 42 H 0.089 0.911 43 H 0.081 0.919 44 H 0.132 0.868 45 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.756 7.662 -2.977 8.255 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.188 4.188 3 Si 0.586 3.414 4 C -0.106 4.106 5 C -0.136 4.136 6 C -0.113 4.113 7 C -0.073 4.073 8 C -0.034 4.034 9 C -0.236 4.236 10 C 0.338 3.662 11 O -0.420 6.420 12 N -0.367 5.367 13 C 0.019 3.981 14 H 0.135 0.865 15 C -0.174 4.174 16 C -0.142 4.142 17 H 0.121 0.879 18 C 0.005 3.995 19 N -0.085 5.085 20 C -0.204 4.204 21 C -0.208 4.208 22 N -0.139 5.139 23 N -0.058 5.058 24 C -0.177 4.177 25 C -0.110 4.110 26 C -0.113 4.113 27 H 0.224 0.776 28 H 0.138 0.862 29 H -0.185 1.185 30 H -0.181 1.181 31 H 0.148 0.852 32 H 0.149 0.851 33 H 0.156 0.844 34 H 0.148 0.852 35 H 0.237 0.763 36 H 0.102 0.898 37 H 0.111 0.889 38 H 0.127 0.873 39 H 0.120 0.880 40 H 0.207 0.793 41 H 0.207 0.793 42 H 0.108 0.892 43 H 0.100 0.900 44 H 0.150 0.850 45 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 0.249 6.638 -1.213 6.753 hybrid contribution -0.794 1.018 -1.684 2.122 sum -0.545 7.656 -2.897 8.204 Atomic orbital electron populations 1.86613 1.17568 1.79956 1.49343 1.25085 0.84079 1.11101 0.98500 0.95008 0.91670 0.74382 0.80330 1.20474 0.98350 0.95119 0.96680 1.20953 0.98464 0.99724 0.94494 1.21347 0.99033 0.93712 0.97235 1.19077 0.99218 0.93959 0.95072 1.22425 0.91139 0.99620 0.90207 1.22890 1.03611 1.01112 0.96025 1.18378 0.77939 0.86485 0.83366 1.90844 1.57914 1.16612 1.76588 1.45821 1.52318 1.15503 1.23093 1.22465 0.95003 0.96343 0.84328 0.86482 1.23362 0.96788 0.98534 0.98670 1.22685 0.92983 0.99480 0.99067 0.87861 1.22181 0.84154 0.89411 1.03736 1.47532 1.26086 1.22687 1.12188 1.23743 0.98451 1.04744 0.93504 1.23687 1.03161 0.96390 0.97600 1.75176 1.10025 1.22257 1.06434 1.78358 1.09838 0.98564 1.19073 1.23548 0.96005 1.03631 0.94527 1.21474 0.96005 1.00128 0.93378 1.21000 0.99004 0.93809 0.97449 0.77597 0.86174 1.18488 1.18128 0.85216 0.85069 0.84445 0.85173 0.76328 0.89802 0.88860 0.87251 0.88028 0.79272 0.79321 0.89232 0.90034 0.85027 0.85130 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.36 12.76 -35.23 -0.45 -0.81 16 2 C -0.08 0.07 2.82 36.00 0.10 0.17 16 3 Si 0.68 -1.13 29.77 -169.99 -5.06 -6.19 16 4 C -0.11 0.07 5.40 -104.50 -0.56 -0.50 16 5 C -0.12 0.17 8.65 -39.65 -0.34 -0.17 16 6 C -0.10 0.13 9.41 -39.11 -0.37 -0.23 16 7 C -0.07 0.02 5.87 -105.05 -0.62 -0.59 16 8 C -0.01 0.00 9.46 -37.15 -0.35 -0.35 16 9 C -0.22 0.17 9.41 -37.50 -0.35 -0.18 16 10 C 0.55 0.76 7.74 -12.96 -0.10 0.66 16 11 O -0.54 -3.10 15.85 5.20 0.08 -3.02 16 12 N -0.72 1.25 5.36 -54.40 -0.29 0.96 16 13 C 0.12 -0.19 4.21 -67.11 -0.28 -0.47 16 14 H 0.12 0.08 7.50 -51.93 -0.39 -0.31 16 15 C -0.13 0.61 7.39 -25.92 -0.19 0.42 16 16 C -0.12 0.38 3.77 -89.72 -0.34 0.04 16 17 H 0.10 -0.19 8.14 -51.93 -0.42 -0.61 16 18 C 0.13 -0.48 6.29 -4.04 -0.03 -0.51 16 19 N -0.29 -0.02 3.44 -61.27 -0.21 -0.23 16 20 C -0.05 0.06 11.57 -17.05 -0.20 -0.14 16 21 C -0.05 -0.06 12.05 -17.74 -0.21 -0.28 16 22 N -0.27 -1.38 12.41 30.23 0.38 -1.00 16 23 N -0.08 -0.31 12.94 60.35 0.78 0.47 16 24 C -0.14 0.18 7.44 -25.83 -0.19 -0.02 16 25 C -0.09 0.03 9.80 -39.11 -0.38 -0.36 16 26 C -0.09 0.02 9.59 -39.65 -0.38 -0.36 16 27 H 0.38 -0.79 8.70 45.56 0.40 -0.39 16 28 H 0.12 -0.18 7.96 -51.93 -0.41 -0.60 16 29 H -0.26 -0.05 7.10 56.52 0.40 0.35 16 30 H -0.26 -0.47 7.11 56.52 0.40 -0.07 16 31 H 0.13 -0.42 4.85 -52.49 -0.25 -0.67 16 32 H 0.13 -0.49 6.17 -52.49 -0.32 -0.81 16 33 H 0.14 0.11 7.52 -52.49 -0.39 -0.28 16 34 H 0.13 -0.49 6.07 -52.49 -0.32 -0.81 16 35 H 0.40 -1.94 8.69 -40.82 -0.35 -2.30 16 36 H 0.08 -0.38 8.14 -51.93 -0.42 -0.81 16 37 H 0.09 -0.59 8.07 -51.93 -0.42 -1.01 16 38 H 0.11 -0.72 8.07 -51.93 -0.42 -1.14 16 39 H 0.10 -0.47 7.85 -51.93 -0.41 -0.88 16 40 H 0.19 -0.97 8.06 -52.49 -0.42 -1.39 16 41 H 0.19 -0.33 8.06 -52.49 -0.42 -0.75 16 42 H 0.09 -0.16 7.90 -51.93 -0.41 -0.57 16 43 H 0.08 0.11 8.14 -51.93 -0.42 -0.32 16 44 H 0.13 -0.21 8.06 -52.49 -0.42 -0.63 16 45 H 0.13 -0.08 8.06 -52.49 -0.42 -0.51 16 LS Contribution 383.63 15.07 5.78 5.78 Total: 0.00 -11.76 383.63 -9.66 -21.42 By element: Atomic # 1 Polarization: -8.63 SS G_CDS: -5.87 Total: -14.50 kcal Atomic # 6 Polarization: 1.92 SS G_CDS: -4.80 Total: -2.88 kcal Atomic # 7 Polarization: -0.45 SS G_CDS: 0.65 Total: 0.20 kcal Atomic # 8 Polarization: -3.46 SS G_CDS: -0.37 Total: -3.83 kcal Atomic # 14 Polarization: -1.13 SS G_CDS: -5.06 Total: -6.19 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -11.76 -9.66 -21.42 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_12360594.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 128.855 kcal (2) G-P(sol) polarization free energy of solvation -11.757 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 117.098 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.659 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.416 kcal (6) G-S(sol) free energy of system = (1) + (5) 107.439 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds