Wall clock time and date at job start Sun Mar 7 2021 00:32:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86291 * 109.47292 * 2 1 4 4 C 1.50698 * 109.47555 * 120.00423 * 2 1 3 5 5 C 1.38334 * 119.87314 * 64.99326 * 4 2 1 6 6 C 1.38004 * 120.12636 * 180.02562 * 5 4 2 7 7 C 1.39395 * 119.87222 * 359.97438 * 6 5 4 8 8 C 1.48281 * 120.12558 * 180.02562 * 7 6 5 9 9 C 1.39509 * 119.97146 * 180.02562 * 8 7 6 10 10 C 1.37670 * 120.01823 * 180.02562 * 9 8 7 11 11 C 1.39704 * 119.97964 * 359.97438 * 10 9 8 12 12 C 1.47716 * 120.02529 * 179.97438 * 11 10 9 13 13 O 1.21565 * 120.00009 * 0.02562 * 12 11 10 14 14 N 1.34781 * 120.00194 * 179.97438 * 12 11 10 15 15 C 1.46493 * 120.00279 * 180.02562 * 14 12 11 16 16 H 1.09003 * 112.84820 * 336.19884 * 15 14 12 17 17 C 1.53781 * 113.61563 * 107.50461 * 15 14 12 18 18 C 1.54049 * 87.08031 * 139.97721 * 17 15 14 19 19 H 1.09000 * 113.61076 * 89.06984 * 18 17 15 20 20 C 1.52990 * 113.70090 * 220.05426 * 18 17 15 21 21 N 1.46497 * 109.47171 * 272.42414 * 20 18 17 22 22 C 1.35315 * 125.87107 * 124.71147 * 21 20 18 23 23 C 1.35355 * 106.17686 * 179.90568 * 22 21 20 24 24 N 1.33767 * 106.49452 * 0.35198 * 23 22 21 25 25 N 1.28631 * 108.88739 * 359.77311 * 24 23 22 26 26 C 1.53781 * 113.61552 * 205.00255 * 15 14 12 27 27 C 1.39708 * 119.94992 * 0.25138 * 11 10 9 28 28 C 1.37664 * 119.97485 * 359.46797 * 27 11 10 29 29 C 1.39398 * 119.74675 * 0.27842 * 7 6 5 30 30 C 1.38001 * 119.87401 * 359.46957 * 29 7 6 31 31 H 0.96701 * 113.99451 * 299.99554 * 1 2 3 32 32 H 1.09009 * 109.46826 * 239.99778 * 2 1 3 33 33 H 1.48507 * 110.00041 * 300.00337 * 3 2 1 34 34 H 1.48498 * 109.99864 * 61.32024 * 3 2 1 35 35 H 1.08002 * 119.93484 * 359.97438 * 5 4 2 36 36 H 1.08002 * 120.06173 * 179.97438 * 6 5 4 37 37 H 1.07997 * 119.99252 * 0.02562 * 9 8 7 38 38 H 1.07997 * 120.00745 * 180.02562 * 10 9 8 39 39 H 0.97006 * 119.99341 * 0.02562 * 14 12 11 40 40 H 1.09005 * 113.61471 * 254.53304 * 17 15 14 41 41 H 1.09003 * 113.61469 * 25.43082 * 17 15 14 42 42 H 1.09007 * 109.47036 * 32.41747 * 20 18 17 43 43 H 1.08994 * 109.47734 * 152.42153 * 20 18 17 44 44 H 1.08004 * 126.91148 * 0.02562 * 22 21 20 45 45 H 1.08002 * 126.75030 * 180.12478 * 23 22 21 46 46 H 1.09002 * 113.61445 * 334.56837 * 26 15 14 47 47 H 1.09002 * 113.61408 * 105.38567 * 26 15 14 48 48 H 1.07999 * 120.01146 * 179.72272 * 27 11 10 49 49 H 1.08005 * 119.98973 * 180.27211 * 28 27 11 50 50 H 1.08004 * 120.06473 * 179.72525 * 29 7 6 51 51 H 1.07997 * 119.94225 * 180.27706 * 30 29 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 1.6831 -2.0613 1.3957 6 6 2.1403 -2.7170 2.5206 7 6 2.8541 -2.0156 3.4911 8 6 3.3485 -2.7147 4.7017 9 6 4.0620 -2.0095 5.6711 10 6 4.5219 -2.6577 6.7953 11 6 4.2734 -4.0219 6.9652 12 6 4.7669 -4.7185 8.1707 13 8 5.3891 -4.1046 9.0156 14 7 4.5264 -6.0346 8.3345 15 6 5.0153 -6.7253 9.5302 16 1 5.8693 -6.2260 9.9880 17 6 3.9041 -7.0894 10.5290 18 6 4.6401 -8.4261 10.7398 19 1 5.3912 -8.3912 11.5290 20 6 3.7048 -9.6308 10.8607 21 7 3.3010 -9.7971 12.2591 22 6 2.0284 -9.8464 12.7164 23 6 2.1156 -10.0102 14.0572 24 7 3.4200 -10.0447 14.3515 25 7 4.0957 -9.9159 13.2646 26 6 5.2205 -8.2360 9.3284 27 6 3.5628 -4.7281 5.9915 28 6 3.0988 -4.0767 4.8709 29 6 3.0967 -0.6534 3.3216 30 6 2.6392 -0.0093 2.1902 31 1 -0.3932 0.4417 0.7651 32 1 1.7923 -0.5139 -0.8901 33 1 1.5615 2.4679 -1.2085 34 1 1.5880 2.4584 1.2242 35 1 1.1296 -2.6035 0.6433 36 1 1.9455 -3.7715 2.6488 37 1 4.2537 -0.9548 5.5398 38 1 5.0739 -2.1115 7.5458 39 1 4.0296 -6.5243 7.6604 40 1 3.8885 -6.4549 11.4152 41 1 2.9222 -7.1995 10.0687 42 1 2.8207 -9.4676 10.2442 43 1 4.2227 -10.5283 10.5229 44 1 1.1248 -9.7722 12.1294 45 1 1.2937 -10.0927 14.7529 46 1 4.5985 -8.6596 8.5399 47 1 6.2675 -8.5270 9.2439 48 1 3.3740 -5.7837 6.1197 49 1 2.5457 -4.6215 4.1201 50 1 3.6454 -0.1041 4.0724 51 1 2.8305 1.0451 2.0556 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14928172_13158362.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:32:16 Heat of formation + Delta-G solvation = 120.551090 kcal Electronic energy + Delta-G solvation = -33278.785953 eV Core-core repulsion = 28726.885055 eV Total energy + Delta-G solvation = -4551.900897 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.168 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -44.15248 -41.66641 -41.02136 -40.11278 -39.04025 -37.68540 -35.87896 -34.61921 -33.89760 -32.68901 -31.94273 -31.70544 -30.99676 -29.57695 -27.17184 -27.02908 -25.29915 -24.79535 -24.09086 -23.57946 -22.75068 -22.58531 -22.05073 -21.45227 -20.83731 -19.31781 -18.77530 -18.51520 -17.92375 -17.70709 -17.16132 -16.88853 -16.65866 -16.40847 -16.13770 -16.11512 -16.00135 -15.82656 -15.57336 -15.21109 -15.07384 -15.05590 -15.02681 -14.81289 -14.38864 -14.33130 -14.14162 -13.86734 -13.76223 -13.57103 -13.39213 -13.13328 -12.86808 -12.72266 -12.68991 -12.46744 -12.17605 -12.10638 -12.02995 -11.81604 -11.76219 -11.61684 -11.05982 -10.91811 -10.83916 -10.65687 -10.30858 -10.19865 -10.18273 -10.08024 -9.18167 -5.03033 -0.77535 0.22085 0.27877 0.42515 0.66319 1.20353 1.32734 1.51980 1.70420 1.76525 1.89766 1.97659 2.51490 2.90082 3.05184 3.13874 3.25563 3.28563 3.34191 3.45985 3.48553 3.55455 3.57210 3.68451 3.71173 3.72704 3.83047 3.85427 3.89613 4.04874 4.11175 4.13511 4.15174 4.22854 4.31257 4.32991 4.43317 4.47389 4.49883 4.51200 4.57228 4.65998 4.75134 4.77259 4.78815 4.79797 4.92583 4.99042 5.03363 5.08178 5.16104 5.24799 5.29940 5.35784 5.37661 5.53267 5.59995 5.68138 5.79821 6.31186 6.33359 7.09475 7.60647 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.076 4.076 3 Si 0.685 3.315 4 C -0.111 4.111 5 C -0.090 4.090 6 C -0.105 4.105 7 C -0.049 4.049 8 C -0.016 4.016 9 C -0.118 4.118 10 C -0.053 4.053 11 C -0.138 4.138 12 C 0.560 3.440 13 O -0.531 6.531 14 N -0.718 5.718 15 C 0.127 3.873 16 H 0.121 0.879 17 C -0.149 4.149 18 C -0.124 4.124 19 H 0.115 0.885 20 C 0.127 3.873 21 N -0.289 5.289 22 C -0.052 4.052 23 C -0.051 4.051 24 N -0.271 5.271 25 N -0.084 5.084 26 C -0.135 4.135 27 C -0.082 4.082 28 C -0.119 4.119 29 C -0.100 4.100 30 C -0.116 4.116 31 H 0.376 0.624 32 H 0.119 0.881 33 H -0.256 1.256 34 H -0.260 1.260 35 H 0.129 0.871 36 H 0.129 0.871 37 H 0.135 0.865 38 H 0.140 0.860 39 H 0.400 0.600 40 H 0.077 0.923 41 H 0.088 0.912 42 H 0.107 0.893 43 H 0.104 0.896 44 H 0.190 0.810 45 H 0.190 0.810 46 H 0.092 0.908 47 H 0.086 0.914 48 H 0.127 0.873 49 H 0.133 0.867 50 H 0.132 0.868 51 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.341 -1.623 -6.384 6.991 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.186 4.186 3 Si 0.587 3.413 4 C -0.111 4.111 5 C -0.108 4.108 6 C -0.123 4.123 7 C -0.049 4.049 8 C -0.017 4.017 9 C -0.135 4.135 10 C -0.072 4.072 11 C -0.141 4.141 12 C 0.348 3.652 13 O -0.408 6.408 14 N -0.369 5.369 15 C 0.022 3.978 16 H 0.139 0.861 17 C -0.187 4.187 18 C -0.144 4.144 19 H 0.133 0.867 20 C 0.006 3.994 21 N -0.083 5.083 22 C -0.203 4.203 23 C -0.208 4.208 24 N -0.137 5.137 25 N -0.064 5.064 26 C -0.173 4.173 27 C -0.100 4.100 28 C -0.136 4.136 29 C -0.118 4.118 30 C -0.133 4.133 31 H 0.224 0.776 32 H 0.137 0.863 33 H -0.181 1.181 34 H -0.185 1.185 35 H 0.147 0.853 36 H 0.147 0.853 37 H 0.153 0.847 38 H 0.158 0.842 39 H 0.236 0.764 40 H 0.095 0.905 41 H 0.107 0.893 42 H 0.125 0.875 43 H 0.122 0.878 44 H 0.207 0.793 45 H 0.207 0.793 46 H 0.111 0.889 47 H 0.105 0.895 48 H 0.145 0.855 49 H 0.151 0.849 50 H 0.149 0.851 51 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -0.527 -0.713 -5.883 5.949 hybrid contribution -2.636 -0.481 -0.274 2.693 sum -3.162 -1.194 -6.157 7.024 Atomic orbital electron populations 1.86613 1.17596 1.79973 1.49331 1.25052 0.84043 1.11074 0.98455 0.94945 0.91662 0.74461 0.80266 1.20396 0.99138 0.94939 0.96672 1.20982 0.98577 0.93730 0.97530 1.21308 0.97349 1.00107 0.93491 1.18817 0.98815 0.93488 0.93819 1.19001 0.96114 0.93316 0.93229 1.21260 0.98291 1.00531 0.93465 1.21242 0.96116 0.92949 0.96914 1.19963 1.03267 0.95116 0.95730 1.18322 0.79103 0.81865 0.85868 1.90810 1.40150 1.65952 1.43899 1.45871 1.57860 1.09444 1.23732 1.22447 0.98044 0.91614 0.85733 0.86110 1.23659 0.98629 0.96164 1.00293 1.22791 0.98851 0.93319 0.99445 0.86719 1.22171 1.00761 1.00683 0.75802 1.47498 1.05164 1.46176 1.09445 1.23716 0.89648 1.10059 0.96848 1.23683 0.95755 1.06951 0.94420 1.75164 1.03916 1.16343 1.18292 1.78304 1.19651 1.18927 0.89474 1.23364 1.02949 0.95148 0.95883 1.21174 0.96153 0.99479 0.93242 1.21159 1.00655 0.93755 0.98066 1.21227 0.99394 0.93562 0.97604 1.21018 0.98483 0.99810 0.94014 0.77609 0.86285 1.18130 1.18482 0.85273 0.85307 0.84709 0.84207 0.76366 0.90471 0.89350 0.87465 0.87794 0.79342 0.79313 0.88946 0.89484 0.85480 0.84897 0.85054 0.85217 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.28 12.83 -35.23 -0.45 -0.73 16 2 C -0.08 0.08 2.80 36.00 0.10 0.18 16 3 Si 0.69 -1.08 29.87 -169.99 -5.08 -6.15 16 4 C -0.11 0.09 5.36 -104.55 -0.56 -0.47 16 5 C -0.09 0.06 9.67 -39.63 -0.38 -0.32 16 6 C -0.10 0.11 9.43 -39.24 -0.37 -0.26 16 7 C -0.05 0.03 5.88 -104.90 -0.62 -0.59 16 8 C -0.02 0.01 5.88 -104.82 -0.62 -0.61 16 9 C -0.12 0.07 9.41 -39.32 -0.37 -0.30 16 10 C -0.05 -0.03 9.58 -39.24 -0.38 -0.41 16 11 C -0.14 -0.03 5.88 -104.93 -0.62 -0.65 16 12 C 0.56 0.84 7.77 -12.39 -0.10 0.74 16 13 O -0.53 -2.93 15.93 5.31 0.08 -2.85 16 14 N -0.72 1.39 5.30 -54.00 -0.29 1.10 16 15 C 0.13 -0.24 4.24 -67.12 -0.28 -0.53 16 16 H 0.12 0.04 7.46 -51.93 -0.39 -0.34 16 17 C -0.15 0.35 7.44 -25.78 -0.19 0.16 16 18 C -0.12 0.39 3.85 -89.67 -0.34 0.04 16 19 H 0.11 -0.12 7.91 -51.93 -0.41 -0.53 16 20 C 0.13 -0.48 6.30 -4.05 -0.03 -0.51 16 21 N -0.29 -0.02 3.44 -61.27 -0.21 -0.23 16 22 C -0.05 0.05 11.57 -17.04 -0.20 -0.15 16 23 C -0.05 -0.07 12.05 -17.74 -0.21 -0.28 16 24 N -0.27 -1.37 12.41 30.24 0.38 -1.00 16 25 N -0.08 -0.33 12.76 60.35 0.77 0.44 16 26 C -0.13 0.60 7.39 -25.92 -0.19 0.41 16 27 C -0.08 0.17 9.52 -39.24 -0.37 -0.20 16 28 C -0.12 0.21 9.41 -39.32 -0.37 -0.16 16 29 C -0.10 0.11 9.43 -39.24 -0.37 -0.26 16 30 C -0.12 0.14 8.65 -39.63 -0.34 -0.20 16 31 H 0.38 -0.82 8.70 45.56 0.40 -0.43 16 32 H 0.12 -0.21 7.96 -51.92 -0.41 -0.62 16 33 H -0.26 -0.48 7.11 56.52 0.40 -0.08 16 34 H -0.26 -0.08 7.00 56.52 0.40 0.32 16 35 H 0.13 -0.18 8.06 -52.49 -0.42 -0.60 16 36 H 0.13 -0.38 6.19 -52.49 -0.33 -0.71 16 37 H 0.14 -0.33 6.19 -52.49 -0.32 -0.65 16 38 H 0.14 0.11 7.64 -52.49 -0.40 -0.29 16 39 H 0.40 -1.95 6.74 -40.82 -0.28 -2.22 16 40 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 41 H 0.09 -0.32 7.90 -51.93 -0.41 -0.73 16 42 H 0.11 -0.70 7.78 -51.93 -0.40 -1.11 16 43 H 0.10 -0.48 8.14 -51.93 -0.42 -0.91 16 44 H 0.19 -0.94 8.06 -52.48 -0.42 -1.37 16 45 H 0.19 -0.31 8.06 -52.49 -0.42 -0.74 16 46 H 0.09 -0.60 8.08 -51.93 -0.42 -1.02 16 47 H 0.09 -0.36 8.14 -51.93 -0.42 -0.79 16 48 H 0.13 -0.65 6.39 -52.49 -0.34 -0.99 16 49 H 0.13 -0.50 6.19 -52.48 -0.32 -0.82 16 50 H 0.13 -0.37 6.19 -52.48 -0.33 -0.70 16 51 H 0.13 -0.35 4.82 -52.49 -0.25 -0.61 16 LS Contribution 422.88 15.07 6.37 6.37 Total: 0.00 -12.17 422.88 -11.59 -23.76 By element: Atomic # 1 Polarization: -10.01 SS G_CDS: -6.35 Total: -16.36 kcal Atomic # 6 Polarization: 2.46 SS G_CDS: -6.81 Total: -4.35 kcal Atomic # 7 Polarization: -0.35 SS G_CDS: 0.65 Total: 0.30 kcal Atomic # 8 Polarization: -3.21 SS G_CDS: -0.37 Total: -3.58 kcal Atomic # 14 Polarization: -1.08 SS G_CDS: -5.08 Total: -6.15 kcal Total LS contribution 6.37 Total: 6.37 kcal Total: -12.17 -11.59 -23.76 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_13158362.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 144.312 kcal (2) G-P(sol) polarization free energy of solvation -12.174 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 132.138 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.587 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.761 kcal (6) G-S(sol) free energy of system = (1) + (5) 120.551 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds