Wall clock time and date at job start Sun Mar 7 2021 00:32:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86305 * 109.46767 * 2 1 4 4 C 1.50697 * 109.47376 * 119.99954 * 2 1 3 5 5 C 1.34704 * 125.66427 * 65.01640 * 4 2 1 6 6 C 1.40968 * 107.02742 * 179.75381 * 5 4 2 7 7 C 1.35940 * 106.74294 * 0.34853 * 6 5 4 8 8 C 1.47820 * 125.92895 * 179.91168 * 7 6 5 9 9 C 1.39807 * 120.00143 * 359.72226 * 8 7 6 10 10 C 1.37803 * 120.24502 * 179.97438 * 9 8 7 11 11 C 1.38783 * 120.24445 * 0.02562 * 10 9 8 12 12 O 1.35651 * 120.00237 * 180.02562 * 11 10 9 13 13 C 1.40250 * 119.99232 * 0.02562 * 11 10 9 14 14 C 1.47566 * 120.11686 * 179.97438 * 13 11 10 15 15 O 1.21586 * 120.00067 * 0.02562 * 14 13 11 16 16 N 1.34776 * 119.99988 * 180.02562 * 14 13 11 17 17 C 1.46496 * 120.00015 * 180.02562 * 16 14 13 18 18 H 1.09004 * 112.90889 * 336.25053 * 17 16 14 19 19 C 1.53784 * 113.61524 * 107.50411 * 17 16 14 20 20 C 1.53778 * 87.08081 * 139.98080 * 19 17 16 21 21 H 1.09004 * 113.61886 * 89.12045 * 20 19 17 22 22 C 1.53003 * 113.68969 * 220.00869 * 20 19 17 23 23 N 1.46497 * 109.47017 * 272.53495 * 22 20 19 24 24 C 1.35318 * 125.86688 * 125.00073 * 23 22 20 25 25 C 1.35353 * 106.17476 * 179.97438 * 24 23 22 26 26 N 1.33773 * 106.49435 * 359.97438 * 25 24 23 27 27 N 1.28633 * 108.89014 * 359.73633 * 26 25 24 28 28 C 1.53778 * 87.08449 * 334.56700 * 20 19 17 29 29 C 1.39216 * 119.99791 * 180.02562 * 8 7 6 30 30 O 1.34348 * 125.66336 * 244.98455 * 4 2 1 31 31 H 0.96703 * 114.00533 * 300.00361 * 1 2 3 32 32 H 1.09000 * 109.47499 * 240.00418 * 2 1 3 33 33 H 1.48503 * 109.99872 * 178.68108 * 3 2 1 34 34 H 1.48503 * 110.00218 * 299.99685 * 3 2 1 35 35 H 1.07993 * 126.48457 * 359.97438 * 5 4 2 36 36 H 1.08006 * 126.63180 * 180.25089 * 6 5 4 37 37 H 1.08004 * 119.87574 * 0.02562 * 9 8 7 38 38 H 1.07997 * 119.87770 * 180.02562 * 10 9 8 39 39 H 0.96697 * 113.99449 * 270.01968 * 12 11 10 40 40 H 0.96998 * 119.99607 * 0.02562 * 16 14 13 41 41 H 1.08993 * 113.61313 * 254.52676 * 19 17 16 42 42 H 1.09000 * 113.61578 * 25.43408 * 19 17 16 43 43 H 1.08994 * 109.47311 * 32.53706 * 22 20 19 44 44 H 1.08999 * 109.47124 * 152.53650 * 22 20 19 45 45 H 1.07996 * 126.91289 * 359.97438 * 24 23 22 46 46 H 1.08000 * 126.75299 * 179.97438 * 25 24 23 47 47 H 1.08998 * 113.61879 * 270.88747 * 28 20 19 48 48 H 1.08999 * 113.61887 * 139.97854 * 28 20 19 49 49 H 1.07995 * 120.11794 * 359.97438 * 29 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.7574 -2.0167 1.5091 6 6 2.3870 -2.2623 2.7462 7 6 2.9091 -1.0779 3.1619 8 6 3.6606 -0.8533 4.4148 9 6 3.8829 -1.9152 5.2966 10 6 4.5833 -1.7116 6.4658 11 6 5.0728 -0.4508 6.7768 12 8 5.7621 -0.2560 7.9288 13 6 4.8548 0.6219 5.9000 14 6 5.3736 1.9638 6.2283 15 8 5.9917 2.1409 7.2603 16 7 5.1622 2.9931 5.3843 17 6 5.6777 4.3251 5.7099 18 1 5.8350 4.4696 6.7788 19 6 6.8787 4.7486 4.8478 20 6 6.2522 6.1524 4.8044 21 1 6.5666 6.7965 5.6257 22 6 6.3641 6.8335 3.4389 23 7 7.6375 7.5529 3.3550 24 6 8.5754 7.3949 2.3924 25 6 9.5795 8.2487 2.7005 26 7 9.2113 8.8793 3.8214 27 7 8.0535 8.4488 4.1803 28 6 4.8955 5.4686 5.0423 29 6 4.1416 0.4170 4.7197 30 8 2.6276 -0.1461 2.2313 31 1 -0.3934 0.4417 0.7650 32 1 1.7924 -0.5138 -0.8900 33 1 3.5345 1.7704 0.0321 34 1 1.5614 2.4680 -1.2085 35 1 1.2374 -2.7399 0.8985 36 1 2.4425 -3.2082 3.2646 37 1 3.5049 -2.8989 5.0602 38 1 4.7519 -2.5362 7.1425 39 1 5.2077 -0.0104 8.6821 40 1 4.6688 2.8518 4.5612 41 1 7.8307 4.7116 5.3770 42 1 6.9139 4.2560 3.8760 43 1 6.3197 6.0803 2.6524 44 1 5.5407 7.5369 3.3152 45 1 8.5316 6.7228 1.5482 46 1 10.4973 8.3926 2.1498 47 1 4.3886 5.1727 4.1238 48 1 4.2467 6.0126 5.7286 49 1 3.9672 1.2396 4.0421 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14928172_13259648.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:32:31 Heat of formation + Delta-G solvation = 75.649857 kcal Electronic energy + Delta-G solvation = -35973.619776 eV Core-core repulsion = 31066.171191 eV Total energy + Delta-G solvation = -4907.448586 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.152 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -44.14295 -43.80396 -41.74896 -40.67899 -39.14815 -38.22103 -37.86209 -35.82260 -34.56797 -34.19054 -32.84151 -32.39827 -31.93170 -30.16389 -29.58050 -27.02166 -26.50508 -25.91203 -24.52539 -23.68456 -23.52198 -22.98047 -22.34051 -21.72583 -21.42225 -20.80405 -19.66482 -19.21210 -18.74702 -18.37091 -17.86820 -17.65019 -17.46672 -17.07365 -16.81505 -16.58087 -16.43992 -16.26680 -15.91497 -15.85768 -15.83385 -15.47258 -15.09024 -14.86852 -14.76931 -14.54210 -14.39188 -14.08573 -14.00309 -13.85458 -13.74405 -13.66587 -13.34684 -13.23220 -13.15523 -12.92013 -12.70612 -12.45229 -12.25273 -12.16930 -11.88879 -11.80632 -11.75327 -11.15443 -10.99219 -10.81601 -10.79443 -10.54545 -10.40381 -10.29930 -10.13604 -9.00524 -5.23461 -0.65234 -0.31863 0.67191 0.67671 0.98266 1.30558 1.33578 1.40565 1.61742 1.71154 1.76872 1.84350 1.95416 2.53696 3.00637 3.06583 3.09807 3.14915 3.20241 3.29308 3.38460 3.47537 3.53748 3.57509 3.74036 3.77459 3.83312 3.87822 3.91501 4.05705 4.06130 4.14395 4.17190 4.27556 4.32187 4.35027 4.47135 4.49718 4.50238 4.55789 4.65973 4.68553 4.73642 4.79237 4.81045 4.90711 4.99041 5.04108 5.06855 5.25535 5.30999 5.34702 5.37640 5.60932 5.88113 6.26936 6.32917 6.59784 7.11093 7.61377 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.028 4.028 3 Si 0.700 3.300 4 C -0.052 4.052 5 C -0.169 4.169 6 C -0.188 4.188 7 C 0.035 3.965 8 C -0.034 4.034 9 C -0.052 4.052 10 C -0.148 4.148 11 C 0.180 3.820 12 O -0.475 6.475 13 C -0.165 4.165 14 C 0.561 3.439 15 O -0.514 6.514 16 N -0.719 5.719 17 C 0.128 3.872 18 H 0.121 0.879 19 C -0.150 4.150 20 C -0.124 4.124 21 H 0.115 0.885 22 C 0.126 3.874 23 N -0.289 5.289 24 C -0.052 4.052 25 C -0.051 4.051 26 N -0.271 5.271 27 N -0.083 5.083 28 C -0.135 4.135 29 C -0.054 4.054 30 O -0.166 6.166 31 H 0.384 0.616 32 H 0.133 0.867 33 H -0.252 1.252 34 H -0.246 1.246 35 H 0.154 0.846 36 H 0.155 0.845 37 H 0.140 0.860 38 H 0.146 0.854 39 H 0.400 0.600 40 H 0.400 0.600 41 H 0.076 0.924 42 H 0.088 0.912 43 H 0.107 0.893 44 H 0.104 0.896 45 H 0.189 0.811 46 H 0.190 0.810 47 H 0.093 0.907 48 H 0.087 0.913 49 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.270 -3.422 -3.257 7.850 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.139 4.139 3 Si 0.600 3.400 4 C -0.102 4.102 5 C -0.188 4.188 6 C -0.207 4.207 7 C -0.015 4.015 8 C -0.034 4.034 9 C -0.071 4.071 10 C -0.167 4.167 11 C 0.134 3.866 12 O -0.287 6.287 13 C -0.169 4.169 14 C 0.349 3.651 15 O -0.389 6.389 16 N -0.371 5.371 17 C 0.023 3.977 18 H 0.139 0.861 19 C -0.188 4.188 20 C -0.144 4.144 21 H 0.133 0.867 22 C 0.005 3.995 23 N -0.083 5.083 24 C -0.203 4.203 25 C -0.208 4.208 26 N -0.137 5.137 27 N -0.063 5.063 28 C -0.173 4.173 29 C -0.073 4.073 30 O -0.064 6.064 31 H 0.232 0.768 32 H 0.150 0.850 33 H -0.177 1.177 34 H -0.170 1.170 35 H 0.172 0.828 36 H 0.172 0.828 37 H 0.158 0.842 38 H 0.164 0.836 39 H 0.259 0.741 40 H 0.235 0.765 41 H 0.095 0.905 42 H 0.106 0.894 43 H 0.125 0.875 44 H 0.122 0.878 45 H 0.206 0.794 46 H 0.207 0.793 47 H 0.111 0.889 48 H 0.106 0.894 49 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -5.012 -2.041 -2.504 5.963 hybrid contribution -0.398 -1.679 -1.491 2.281 sum -5.410 -3.720 -3.995 7.686 Atomic orbital electron populations 1.86573 1.16111 1.81740 1.49124 1.24421 0.85259 1.11262 0.92946 0.94428 0.81255 0.77064 0.87231 1.22898 1.01086 0.93932 0.92273 1.21577 1.03595 0.95689 0.97964 1.21874 1.02756 0.98451 0.97614 1.20266 1.03041 0.87431 0.90734 1.17568 1.00288 0.94166 0.91411 1.21135 0.95508 0.98443 0.91971 1.21411 0.99234 0.97358 0.98662 1.18612 0.89178 0.90868 0.87981 1.84755 1.35174 1.90955 1.17823 1.20278 1.04463 0.94268 0.97865 1.18025 0.79599 0.83853 0.83658 1.90849 1.39316 1.83989 1.24783 1.45882 1.58072 1.08741 1.24445 1.22437 0.93957 0.80274 1.00993 0.86087 1.23616 0.99390 0.94623 1.01219 1.22744 0.98268 0.96323 0.97034 0.86734 1.22182 0.81574 0.96128 0.99591 1.47499 1.16277 1.26989 1.17525 1.23711 0.91632 1.06413 0.98500 1.23681 1.01765 0.98285 0.97095 1.75164 1.04505 1.21875 1.12161 1.78303 1.08191 1.03892 1.15953 1.23374 0.95999 0.96138 1.01833 1.21271 0.94410 0.96594 0.94983 1.83900 1.57972 1.37948 1.26541 0.76837 0.84985 1.17667 1.17027 0.82814 0.82778 0.84205 0.83604 0.74077 0.76468 0.90472 0.89387 0.87488 0.87775 0.79371 0.79330 0.88860 0.89427 0.84701 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.90 12.88 -35.23 -0.45 0.45 16 2 C -0.03 0.06 2.98 36.00 0.11 0.16 16 3 Si 0.70 -2.04 32.11 -169.99 -5.46 -7.50 16 4 C -0.05 0.04 6.20 -35.56 -0.22 -0.18 16 5 C -0.17 0.07 10.78 -39.80 -0.43 -0.36 16 6 C -0.19 0.14 10.26 -39.37 -0.40 -0.26 16 7 C 0.04 -0.02 7.03 -36.49 -0.26 -0.27 16 8 C -0.03 0.04 5.87 -105.03 -0.62 -0.58 16 9 C -0.05 0.10 9.54 -39.15 -0.37 -0.27 16 10 C -0.15 0.21 9.96 -39.54 -0.39 -0.18 16 11 C 0.18 0.09 6.72 -38.62 -0.26 -0.17 16 12 O -0.48 -0.68 11.55 -40.60 -0.47 -1.15 16 13 C -0.17 -0.04 5.88 -104.90 -0.62 -0.65 16 14 C 0.56 0.78 7.76 -12.46 -0.10 0.69 16 15 O -0.51 -2.62 14.74 -16.66 -0.25 -2.86 16 16 N -0.72 1.37 5.30 -54.04 -0.29 1.08 16 17 C 0.13 -0.26 4.24 -67.12 -0.28 -0.54 16 18 H 0.12 0.01 7.47 -51.93 -0.39 -0.38 16 19 C -0.15 0.33 7.43 -25.92 -0.19 0.13 16 20 C -0.12 0.39 3.83 -89.81 -0.34 0.04 16 21 H 0.11 -0.12 7.92 -51.93 -0.41 -0.54 16 22 C 0.13 -0.47 6.29 -4.04 -0.03 -0.50 16 23 N -0.29 -0.06 3.44 -61.26 -0.21 -0.28 16 24 C -0.05 0.04 11.57 -17.04 -0.20 -0.16 16 25 C -0.05 -0.08 12.05 -17.73 -0.21 -0.29 16 26 N -0.27 -1.40 12.41 30.24 0.38 -1.03 16 27 N -0.08 -0.34 12.77 60.35 0.77 0.43 16 28 C -0.13 0.63 7.39 -25.92 -0.19 0.44 16 29 C -0.05 0.08 9.20 -38.78 -0.36 -0.28 16 30 O -0.17 0.10 8.80 4.57 0.04 0.14 16 31 H 0.38 -2.10 8.70 45.56 0.40 -1.71 16 32 H 0.13 -0.29 7.96 -51.93 -0.41 -0.70 16 33 H -0.25 0.10 7.11 56.52 0.40 0.50 16 34 H -0.25 0.05 7.11 56.52 0.40 0.45 16 35 H 0.15 -0.20 8.06 -52.49 -0.42 -0.62 16 36 H 0.15 -0.43 7.25 -52.48 -0.38 -0.81 16 37 H 0.14 -0.57 6.96 -52.48 -0.37 -0.93 16 38 H 0.15 -0.45 8.06 -52.49 -0.42 -0.87 16 39 H 0.40 -0.94 9.06 45.56 0.41 -0.53 16 40 H 0.40 -1.82 6.75 -40.82 -0.28 -2.10 16 41 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 42 H 0.09 -0.29 7.90 -51.93 -0.41 -0.70 16 43 H 0.11 -0.68 7.78 -51.93 -0.40 -1.08 16 44 H 0.10 -0.49 8.14 -51.93 -0.42 -0.91 16 45 H 0.19 -0.89 8.06 -52.49 -0.42 -1.31 16 46 H 0.19 -0.27 8.06 -52.49 -0.42 -0.70 16 47 H 0.09 -0.63 8.08 -51.93 -0.42 -1.04 16 48 H 0.09 -0.40 8.14 -51.93 -0.42 -0.83 16 49 H 0.14 -0.50 6.24 -52.49 -0.33 -0.83 16 LS Contribution 421.92 15.07 6.36 6.36 Total: 0.00 -13.54 421.92 -10.09 -23.62 By element: Atomic # 1 Polarization: -10.90 SS G_CDS: -5.14 Total: -16.04 kcal Atomic # 6 Polarization: 2.13 SS G_CDS: -5.37 Total: -3.23 kcal Atomic # 7 Polarization: -0.44 SS G_CDS: 0.65 Total: 0.21 kcal Atomic # 8 Polarization: -2.29 SS G_CDS: -1.13 Total: -3.42 kcal Atomic # 14 Polarization: -2.04 SS G_CDS: -5.46 Total: -7.50 kcal Total LS contribution 6.36 Total: 6.36 kcal Total: -13.54 -10.09 -23.62 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_13259648.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 99.274 kcal (2) G-P(sol) polarization free energy of solvation -13.537 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 85.737 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.087 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.624 kcal (6) G-S(sol) free energy of system = (1) + (5) 75.650 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds