Wall clock time and date at job start Sun Mar 7 2021 00:32:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86300 * 109.46953 * 2 1 4 4 C 1.50694 * 109.47419 * 240.00077 * 2 1 3 5 5 C 1.34194 * 126.54286 * 104.95450 * 4 2 1 6 6 N 1.36861 * 109.96980 * 180.02562 * 5 4 2 7 7 C 1.37406 * 109.98036 * 359.78803 * 6 5 4 8 8 C 1.39326 * 133.24531 * 179.52796 * 7 6 5 9 9 C 1.36357 * 120.23221 * 180.36707 * 8 7 6 10 10 C 1.40162 * 120.66847 * 0.27958 * 9 8 7 11 11 C 1.47659 * 119.97024 * 179.97438 * 10 9 8 12 12 O 1.21582 * 119.99505 * 179.97438 * 11 10 9 13 13 N 1.34772 * 120.00318 * 0.02562 * 11 10 9 14 14 C 1.46494 * 120.00242 * 179.97438 * 13 11 10 15 15 H 1.09000 * 112.84909 * 23.80181 * 14 13 11 16 16 C 1.53780 * 113.61535 * 155.00161 * 14 13 11 17 17 C 1.53783 * 87.08326 * 139.98434 * 16 14 13 18 18 H 1.08991 * 113.62004 * 89.20097 * 17 16 14 19 19 C 1.53004 * 113.61184 * 220.02191 * 17 16 14 20 20 N 1.46501 * 109.46962 * 184.99740 * 19 17 16 21 21 C 1.35310 * 125.86939 * 124.99905 * 20 19 17 22 22 C 1.35346 * 106.17819 * 180.02562 * 21 20 19 23 23 N 1.33780 * 106.49550 * 359.97438 * 22 21 20 24 24 N 1.28637 * 108.88166 * 359.73886 * 23 22 21 25 25 C 1.53784 * 113.61480 * 252.49855 * 14 13 11 26 26 C 1.39190 * 120.05470 * 359.97438 * 10 9 8 27 27 C 1.39220 * 119.39610 * 359.97438 * 26 10 9 28 28 H 0.96701 * 113.99528 * 59.99736 * 1 2 3 29 29 H 1.09002 * 109.47058 * 120.00021 * 2 1 3 30 30 H 1.48501 * 110.00224 * 298.67883 * 3 2 1 31 31 H 1.48498 * 110.00010 * 59.99936 * 3 2 1 32 32 H 1.07996 * 125.01267 * 0.07763 * 5 4 2 33 33 H 0.97001 * 125.00919 * 180.02562 * 6 5 4 34 34 H 1.08002 * 119.88683 * 0.65151 * 8 7 6 35 35 H 1.08002 * 119.66116 * 180.25886 * 9 8 7 36 36 H 0.97001 * 119.99932 * 359.97438 * 13 11 10 37 37 H 1.09001 * 113.61271 * 254.53188 * 16 14 13 38 38 H 1.09002 * 113.61696 * 25.34599 * 16 14 13 39 39 H 1.08996 * 109.46969 * 304.99653 * 19 17 16 40 40 H 1.08998 * 109.47298 * 64.99831 * 19 17 16 41 41 H 1.08003 * 126.91011 * 359.97413 * 21 20 19 42 42 H 1.08000 * 126.75488 * 180.02562 * 22 21 20 43 43 H 1.08993 * 113.61359 * 334.56493 * 25 14 13 44 44 H 1.09005 * 113.61598 * 105.47119 * 25 14 13 45 45 H 1.08003 * 120.30165 * 179.97438 * 26 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.4601 -0.1386 -2.3233 6 7 2.8019 -1.1003 -3.2350 7 6 2.4994 -2.3457 -2.7396 8 6 2.6326 -3.6348 -3.2512 9 6 2.2294 -4.7102 -2.5162 10 6 1.6715 -4.5368 -1.2422 11 6 1.2395 -5.7122 -0.4598 12 8 0.7560 -5.5624 0.6456 13 7 1.3822 -6.9512 -0.9706 14 6 0.9542 -8.1174 -0.1942 15 1 0.1938 -7.8756 0.5484 16 6 0.6033 -9.3389 -1.0601 17 6 1.3002 -10.1979 0.0083 18 1 0.6348 -10.5270 0.8063 19 6 2.1395 -11.3374 -0.5732 20 7 2.6622 -12.1645 0.5172 21 6 2.4991 -13.5015 0.6463 22 6 3.1387 -13.8510 1.7868 23 7 3.6555 -12.7255 2.2927 24 7 3.3603 -11.7452 1.5139 25 6 2.1217 -8.9476 0.3648 26 6 1.5243 -3.2575 -0.7138 27 6 1.9362 -2.1578 -1.4617 28 1 -0.3932 0.4418 -0.7651 29 1 1.7924 -0.5138 0.8900 30 1 1.5879 2.4586 -1.2242 31 1 1.5614 2.4679 1.2085 32 1 2.5965 0.9237 -2.4623 33 1 3.2022 -0.9283 -4.1017 34 1 3.0609 -3.7831 -4.2315 35 1 2.3407 -5.7056 -2.9201 36 1 1.7684 -7.0708 -1.8524 37 1 -0.4678 -9.5248 -1.1393 38 1 1.1071 -9.3482 -2.0267 39 1 1.5182 -11.9489 -1.2275 40 1 2.9698 -10.9222 -1.1444 41 1 1.9652 -14.1577 -0.0251 42 1 3.2172 -14.8434 2.2056 43 1 3.0417 -8.8507 -0.2117 44 1 2.2765 -8.8177 1.4359 45 1 1.0946 -3.1192 0.2673 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14928172_13287722.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:32:35 Heat of formation + Delta-G solvation = 128.429210 kcal Electronic energy + Delta-G solvation = -29572.236152 eV Core-core repulsion = 25367.240864 eV Total energy + Delta-G solvation = -4204.995287 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.148 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -44.11073 -42.51203 -41.21723 -39.67814 -37.97031 -37.41408 -35.78017 -34.24072 -33.29641 -31.89610 -30.95281 -30.55200 -29.42215 -26.88239 -26.50647 -25.58363 -23.95756 -23.52464 -23.46377 -22.28024 -21.48669 -21.07855 -20.63392 -19.35981 -18.76301 -18.35517 -17.65683 -17.49819 -17.17241 -16.92965 -16.31884 -16.20800 -16.00721 -15.75823 -15.66177 -15.59773 -15.35002 -15.11846 -14.79896 -14.78883 -14.39512 -14.19622 -13.85923 -13.77267 -13.63991 -13.50111 -13.24892 -12.60580 -12.56749 -12.45967 -12.36138 -12.13304 -12.05249 -11.84484 -11.78319 -11.49546 -11.00426 -10.81296 -10.79597 -10.46827 -10.27103 -10.02553 -9.34908 -8.85731 -4.96361 -0.06699 0.16438 0.70241 1.29569 1.36985 1.45058 1.55038 1.74102 1.93230 1.96795 2.00306 2.17375 2.93984 3.10338 3.25961 3.42126 3.49311 3.51231 3.56000 3.67251 3.70769 3.77861 3.82195 3.87440 3.92258 4.04605 4.06039 4.17001 4.33600 4.34801 4.40548 4.46695 4.50091 4.56168 4.57268 4.62166 4.75816 4.80686 4.84267 5.00133 5.05029 5.11826 5.22957 5.27897 5.35653 5.46127 5.55888 5.58425 5.64675 5.95829 6.32850 6.52019 6.53922 7.31892 7.65179 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.043 4.043 3 Si 0.687 3.313 4 C -0.187 4.187 5 C 0.059 3.941 6 N -0.585 5.585 7 C 0.119 3.881 8 C -0.134 4.134 9 C -0.066 4.066 10 C -0.169 4.169 11 C 0.566 3.434 12 O -0.535 6.535 13 N -0.719 5.719 14 C 0.125 3.875 15 H 0.119 0.881 16 C -0.135 4.135 17 C -0.122 4.122 18 H 0.103 0.897 19 C 0.126 3.874 20 N -0.291 5.291 21 C -0.054 4.054 22 C -0.052 4.052 23 N -0.273 5.273 24 N -0.078 5.078 25 C -0.139 4.139 26 C 0.009 3.991 27 C -0.102 4.102 28 H 0.373 0.627 29 H 0.116 0.884 30 H -0.260 1.260 31 H -0.255 1.255 32 H 0.176 0.824 33 H 0.421 0.579 34 H 0.127 0.873 35 H 0.127 0.873 36 H 0.399 0.601 37 H 0.083 0.917 38 H 0.092 0.908 39 H 0.109 0.891 40 H 0.101 0.899 41 H 0.190 0.810 42 H 0.190 0.810 43 H 0.089 0.911 44 H 0.081 0.919 45 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.472 -0.390 -10.257 10.370 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.153 4.153 3 Si 0.588 3.412 4 C -0.194 4.194 5 C -0.068 4.068 6 N -0.187 5.187 7 C 0.010 3.990 8 C -0.155 4.155 9 C -0.086 4.086 10 C -0.174 4.174 11 C 0.354 3.646 12 O -0.412 6.412 13 N -0.371 5.371 14 C 0.020 3.980 15 H 0.137 0.863 16 C -0.174 4.174 17 C -0.142 4.142 18 H 0.122 0.878 19 C 0.005 3.995 20 N -0.085 5.085 21 C -0.205 4.205 22 C -0.209 4.209 23 N -0.139 5.139 24 N -0.058 5.058 25 C -0.177 4.177 26 C -0.011 4.011 27 C -0.107 4.107 28 H 0.220 0.780 29 H 0.134 0.866 30 H -0.185 1.185 31 H -0.180 1.180 32 H 0.193 0.807 33 H 0.259 0.741 34 H 0.145 0.855 35 H 0.145 0.855 36 H 0.235 0.765 37 H 0.102 0.898 38 H 0.111 0.889 39 H 0.127 0.873 40 H 0.120 0.880 41 H 0.207 0.793 42 H 0.207 0.793 43 H 0.108 0.892 44 H 0.100 0.900 45 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 1.682 1.555 -8.345 8.654 hybrid contribution -1.205 -1.259 -2.207 2.812 sum 0.477 0.296 -10.552 10.567 Atomic orbital electron populations 1.86646 1.17907 1.79871 1.48963 1.24371 0.83521 1.10076 0.97336 0.95179 0.91420 0.74116 0.80516 1.20703 1.08995 0.91931 0.97811 1.21756 1.01023 0.94452 0.89572 1.41738 1.54741 1.04125 1.18097 1.18443 0.99887 0.86502 0.94176 1.19660 1.05836 0.88880 1.01094 1.20566 0.96778 0.98280 0.92996 1.19543 1.08271 0.93287 0.96266 1.18220 0.77692 0.82948 0.85706 1.90806 1.44292 1.86028 1.20123 1.45828 1.64689 1.05528 1.21010 1.22463 0.97859 0.82988 0.94712 0.86329 1.23375 1.01890 0.94340 0.97816 1.22657 0.98473 0.93304 0.99776 0.87838 1.22189 0.98916 0.92568 0.85824 1.47538 1.34943 1.07022 1.18971 1.23739 1.08109 0.85611 1.03004 1.23686 1.01837 0.99863 0.95483 1.75183 1.19728 0.97021 1.21986 1.78360 1.10127 1.22113 0.95171 1.23527 0.97682 0.93239 1.03298 1.20712 0.92309 0.89201 0.98863 1.18916 1.04454 0.92927 0.94363 0.77974 0.86566 1.18499 1.17982 0.80696 0.74125 0.85465 0.85480 0.76480 0.89793 0.88931 0.87272 0.88042 0.79288 0.79340 0.89246 0.90002 0.84314 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.15 12.88 -35.23 -0.45 -1.61 16 2 C -0.04 -0.02 3.06 36.00 0.11 0.09 16 3 Si 0.69 -0.97 30.82 -169.99 -5.24 -6.21 16 4 C -0.19 -0.09 5.58 -102.69 -0.57 -0.66 16 5 C 0.06 -0.10 10.43 -16.73 -0.17 -0.28 16 6 N -0.58 1.23 6.05 -10.61 -0.06 1.16 16 7 C 0.12 0.03 7.27 -83.95 -0.61 -0.58 16 8 C -0.13 0.13 10.00 -39.85 -0.40 -0.26 16 9 C -0.07 0.05 9.46 -39.54 -0.37 -0.32 16 10 C -0.17 -0.34 5.87 -104.98 -0.62 -0.96 16 11 C 0.57 1.77 7.76 -12.42 -0.10 1.67 16 12 O -0.54 -3.89 15.93 5.29 0.08 -3.80 16 13 N -0.72 0.41 5.30 -54.02 -0.29 0.13 16 14 C 0.12 -0.10 4.24 -67.12 -0.28 -0.38 16 15 H 0.12 0.17 7.46 -51.93 -0.39 -0.22 16 16 C -0.14 0.54 7.39 -25.92 -0.19 0.35 16 17 C -0.12 0.33 3.77 -89.80 -0.34 -0.01 16 18 H 0.10 -0.14 8.14 -51.93 -0.42 -0.57 16 19 C 0.13 -0.44 6.29 -4.04 -0.03 -0.46 16 20 N -0.29 -0.11 3.44 -61.26 -0.21 -0.32 16 21 C -0.05 0.04 11.57 -17.05 -0.20 -0.16 16 22 C -0.05 -0.08 12.05 -17.73 -0.21 -0.29 16 23 N -0.27 -1.45 12.41 30.24 0.38 -1.08 16 24 N -0.08 -0.33 12.94 60.35 0.78 0.45 16 25 C -0.14 0.10 7.43 -25.91 -0.19 -0.09 16 26 C 0.01 0.03 9.64 -38.86 -0.37 -0.35 16 27 C -0.10 -0.22 6.34 -105.16 -0.67 -0.88 16 28 H 0.37 -0.37 8.70 45.56 0.40 0.02 16 29 H 0.12 0.06 7.96 -51.93 -0.41 -0.35 16 30 H -0.26 0.10 7.00 56.52 0.40 0.50 16 31 H -0.26 -0.59 7.11 56.52 0.40 -0.19 16 32 H 0.18 -0.78 6.27 -52.49 -0.33 -1.11 16 33 H 0.42 -2.16 8.96 -40.82 -0.37 -2.52 16 34 H 0.13 -0.44 8.06 -52.49 -0.42 -0.87 16 35 H 0.13 -0.51 6.36 -52.49 -0.33 -0.84 16 36 H 0.40 -1.43 6.73 -40.82 -0.27 -1.70 16 37 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 38 H 0.09 -0.54 8.08 -51.93 -0.42 -0.96 16 39 H 0.11 -0.68 8.07 -51.93 -0.42 -1.10 16 40 H 0.10 -0.44 7.84 -51.93 -0.41 -0.85 16 41 H 0.19 -0.92 8.06 -52.48 -0.42 -1.34 16 42 H 0.19 -0.28 8.06 -52.49 -0.42 -0.70 16 43 H 0.09 -0.12 7.90 -51.93 -0.41 -0.53 16 44 H 0.08 0.15 8.14 -51.93 -0.42 -0.28 16 45 H 0.14 0.62 7.64 -52.48 -0.40 0.21 16 LS Contribution 382.62 15.07 5.77 5.77 Total: 0.00 -13.27 382.62 -9.97 -23.24 By element: Atomic # 1 Polarization: -8.66 SS G_CDS: -5.51 Total: -14.16 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: -5.22 Total: -3.57 kcal Atomic # 7 Polarization: -0.25 SS G_CDS: 0.59 Total: 0.35 kcal Atomic # 8 Polarization: -5.04 SS G_CDS: -0.37 Total: -5.41 kcal Atomic # 14 Polarization: -0.97 SS G_CDS: -5.24 Total: -6.21 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -13.27 -9.97 -23.24 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_13287722.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 151.668 kcal (2) G-P(sol) polarization free energy of solvation -13.267 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 138.401 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.972 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.239 kcal (6) G-S(sol) free energy of system = (1) + (5) 128.429 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds