Wall clock time and date at job start Sun Mar 7 2021 00:32:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86294 * 109.47382 * 2 1 4 4 C 1.50696 * 109.47087 * 120.00535 * 2 1 3 5 5 C 1.38356 * 120.35182 * 65.25473 * 4 2 1 6 6 C 1.40027 * 118.28689 * 180.27871 * 5 4 2 7 7 C 1.47840 * 120.55399 * 179.73800 * 6 5 4 8 8 O 1.21549 * 120.00444 * 359.72458 * 7 6 5 9 9 N 1.34779 * 119.99520 * 179.72864 * 7 6 5 10 10 C 1.46500 * 119.99895 * 180.02562 * 9 7 6 11 11 H 1.09003 * 112.85046 * 336.19048 * 10 9 7 12 12 C 1.53775 * 113.61656 * 107.50207 * 10 9 7 13 13 C 1.53779 * 87.08438 * 139.98199 * 12 10 9 14 14 H 1.09002 * 113.61731 * 89.11293 * 13 12 10 15 15 C 1.53000 * 113.69071 * 220.00724 * 13 12 10 16 16 N 1.46499 * 109.46974 * 274.06244 * 15 13 12 17 17 C 1.35316 * 125.86571 * 124.71875 * 16 15 13 18 18 C 1.35354 * 106.17417 * 179.90227 * 17 16 15 19 19 N 1.33771 * 106.49513 * 0.34817 * 18 17 16 20 20 N 1.28641 * 108.88672 * 359.77689 * 19 18 17 21 21 C 1.53777 * 113.61534 * 204.99945 * 10 9 7 22 22 C 1.39513 * 118.88031 * 359.46832 * 6 5 4 23 23 N 1.31689 * 120.57195 * 0.27268 * 22 6 5 24 24 C 1.31929 * 121.87689 * 359.97438 * 23 22 6 25 25 H 0.96696 * 114.00099 * 300.00069 * 1 2 3 26 26 H 1.09007 * 109.46605 * 239.99869 * 2 1 3 27 27 H 1.48505 * 110.00129 * 300.00180 * 3 2 1 28 28 H 1.48496 * 109.99832 * 61.32154 * 3 2 1 29 29 H 1.08005 * 120.85462 * 0.04705 * 5 4 2 30 30 H 0.97002 * 120.00021 * 359.97438 * 9 7 6 31 31 H 1.08993 * 113.61636 * 25.42563 * 12 10 9 32 32 H 1.09008 * 113.61006 * 254.52805 * 12 10 9 33 33 H 1.09001 * 109.47043 * 34.05895 * 15 13 12 34 34 H 1.08992 * 109.47277 * 154.06065 * 15 13 12 35 35 H 1.07996 * 126.91407 * 0.02562 * 17 16 15 36 36 H 1.07995 * 126.75454 * 180.12241 * 18 17 16 37 37 H 1.08997 * 113.61941 * 105.46412 * 21 10 9 38 38 H 1.09009 * 113.68972 * 334.57492 * 21 10 9 39 39 H 1.08000 * 119.71577 * 180.25133 * 22 6 5 40 40 H 1.08003 * 119.46116 * 180.02562 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6931 -2.0624 1.4032 6 6 2.1744 -2.6777 2.5653 7 6 1.9433 -4.1184 2.8038 8 8 1.3269 -4.7780 1.9900 9 7 2.4163 -4.7003 3.9237 10 6 2.1879 -6.1280 4.1598 11 1 1.3202 -6.5123 3.6234 12 6 3.4501 -6.9900 3.9912 13 6 2.9762 -7.7847 5.2194 14 1 2.3249 -8.6231 4.9724 15 6 4.1069 -8.1722 6.1746 16 7 4.7135 -9.4290 5.7289 17 6 6.0256 -9.6254 5.4627 18 6 6.1444 -10.9204 5.0875 19 7 4.9143 -11.4439 5.1344 20 7 4.0892 -10.5346 5.5181 21 6 2.2153 -6.5186 5.6469 22 6 2.8803 -1.9096 3.4916 23 7 3.0862 -0.6263 3.2794 24 6 2.6404 -0.0190 2.1963 25 1 -0.3933 0.4417 0.7650 26 1 1.7922 -0.5139 -0.8901 27 1 1.5615 2.4679 -1.2085 28 1 1.5880 2.4584 1.2242 29 1 1.1469 -2.6278 0.6626 30 1 2.9085 -4.1740 4.5730 31 1 4.3780 -6.4425 4.1566 32 1 3.4604 -7.5738 3.0707 33 1 4.8623 -7.3864 6.1812 34 1 3.7056 -8.2989 7.1801 35 1 6.8187 -8.8961 5.5367 36 1 7.0530 -11.4299 4.8024 37 1 1.2287 -6.7218 6.0633 38 1 2.8052 -5.8429 6.2664 39 1 3.2611 -2.3713 4.3906 40 1 2.8320 1.0354 2.0616 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14928172_13287814.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:32:56 Heat of formation + Delta-G solvation = 107.744797 kcal Electronic energy + Delta-G solvation = -24947.076242 eV Core-core repulsion = 21153.173911 eV Total energy + Delta-G solvation = -3793.902331 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 316.132 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -44.16245 -42.05908 -41.05580 -39.55417 -38.14539 -35.92772 -34.62329 -33.86348 -32.97581 -31.95054 -29.70128 -27.41656 -27.07370 -26.36711 -24.42393 -23.91343 -23.58288 -22.40129 -21.77663 -20.86600 -19.32375 -18.83511 -18.30465 -18.00713 -17.88849 -17.51818 -16.82233 -16.62418 -16.54293 -16.14115 -15.95268 -15.86592 -15.22506 -15.13381 -14.94383 -14.57345 -14.49298 -14.32047 -13.90412 -13.79364 -13.54514 -13.28091 -12.88506 -12.74748 -12.50128 -12.20090 -12.13897 -11.83245 -11.80218 -11.42044 -11.13750 -10.98489 -10.79440 -10.62618 -10.49797 -10.31867 -10.25181 -5.13291 -0.67163 -0.10937 0.65343 1.05846 1.31332 1.41424 1.60824 1.69522 1.78574 1.86089 2.52883 2.90941 3.04102 3.10526 3.16695 3.24599 3.29294 3.44443 3.50386 3.54483 3.58949 3.65818 3.69967 3.81354 4.00405 4.02691 4.10307 4.12681 4.29415 4.30807 4.38942 4.44462 4.47182 4.62186 4.73958 4.74449 4.77109 4.82696 4.95944 5.19220 5.23856 5.28728 5.58959 6.19461 6.20581 6.53281 6.94962 7.59679 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.525 6.525 2 C -0.072 4.072 3 Si 0.687 3.313 4 C -0.177 4.177 5 C 0.012 3.988 6 C -0.190 4.190 7 C 0.566 3.434 8 O -0.525 6.525 9 N -0.716 5.716 10 C 0.127 3.873 11 H 0.122 0.878 12 C -0.148 4.148 13 C -0.124 4.124 14 H 0.115 0.885 15 C 0.127 3.873 16 N -0.289 5.289 17 C -0.052 4.052 18 C -0.051 4.051 19 N -0.271 5.271 20 N -0.084 5.084 21 C -0.135 4.135 22 C 0.140 3.860 23 N -0.478 5.478 24 C 0.127 3.873 25 H 0.377 0.623 26 H 0.125 0.875 27 H -0.250 1.250 28 H -0.255 1.255 29 H 0.152 0.848 30 H 0.401 0.599 31 H 0.089 0.911 32 H 0.077 0.923 33 H 0.108 0.892 34 H 0.104 0.896 35 H 0.190 0.810 36 H 0.190 0.810 37 H 0.087 0.913 38 H 0.093 0.907 39 H 0.161 0.839 40 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.145 5.802 3.637 8.566 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.331 6.331 2 C -0.182 4.182 3 Si 0.587 3.413 4 C -0.179 4.179 5 C -0.014 4.014 6 C -0.195 4.195 7 C 0.353 3.647 8 O -0.401 6.401 9 N -0.367 5.367 10 C 0.022 3.978 11 H 0.140 0.860 12 C -0.187 4.187 13 C -0.144 4.144 14 H 0.133 0.867 15 C 0.006 3.994 16 N -0.083 5.083 17 C -0.202 4.202 18 C -0.208 4.208 19 N -0.137 5.137 20 N -0.064 5.064 21 C -0.173 4.173 22 C -0.019 4.019 23 N -0.185 5.185 24 C -0.029 4.029 25 H 0.225 0.775 26 H 0.142 0.858 27 H -0.175 1.175 28 H -0.180 1.180 29 H 0.170 0.830 30 H 0.237 0.763 31 H 0.107 0.893 32 H 0.096 0.904 33 H 0.126 0.874 34 H 0.122 0.878 35 H 0.207 0.793 36 H 0.207 0.793 37 H 0.106 0.894 38 H 0.112 0.888 39 H 0.178 0.822 40 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 3.651 5.636 3.145 7.415 hybrid contribution -0.074 0.226 0.328 0.405 sum 3.577 5.862 3.473 7.695 Atomic orbital electron populations 1.86654 1.17200 1.79915 1.49328 1.25004 0.84294 1.11271 0.97645 0.95033 0.91348 0.73898 0.80998 1.21370 1.02002 0.95317 0.99201 1.21659 0.91550 0.93284 0.94898 1.21029 1.05001 0.95046 0.98398 1.18057 0.78676 0.86357 0.81642 1.90833 1.40064 1.64511 1.44732 1.45854 1.57633 1.10568 1.22638 1.22489 0.99351 0.79476 0.96505 0.86027 1.23605 0.98527 0.97876 0.98716 1.22740 0.97120 0.98454 0.96060 0.86715 1.22169 0.96747 0.80977 0.99543 1.47493 1.06494 1.11002 1.43316 1.23716 0.87725 1.00463 1.08333 1.23688 0.97958 0.92826 1.06354 1.75170 1.00211 1.22831 1.15484 1.78308 1.21774 0.88865 1.17431 1.23371 1.01938 0.95932 0.96102 1.23015 0.92116 0.89554 0.97214 1.67741 1.19587 1.10415 1.20771 1.22970 0.91351 1.00210 0.88331 0.77493 0.85759 1.17470 1.17968 0.83001 0.76319 0.89254 0.90416 0.87426 0.87787 0.79315 0.79308 0.89433 0.88816 0.82228 0.81941 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.07 12.84 -35.23 -0.45 -0.52 16 2 C -0.07 0.12 2.81 36.00 0.10 0.22 16 3 Si 0.69 -1.78 29.91 -169.99 -5.08 -6.87 16 4 C -0.18 0.19 5.35 -104.54 -0.56 -0.37 16 5 C 0.01 0.00 9.38 -38.87 -0.36 -0.36 16 6 C -0.19 0.06 5.89 -104.82 -0.62 -0.56 16 7 C 0.57 0.40 7.78 -12.33 -0.10 0.31 16 8 O -0.53 -2.55 16.02 5.32 0.09 -2.47 16 9 N -0.72 1.96 5.31 -53.97 -0.29 1.67 16 10 C 0.13 -0.32 4.24 -67.12 -0.28 -0.61 16 11 H 0.12 -0.03 7.46 -51.93 -0.39 -0.42 16 12 C -0.15 0.43 7.43 -25.92 -0.19 0.24 16 13 C -0.12 0.44 3.82 -89.81 -0.34 0.10 16 14 H 0.11 -0.16 7.94 -51.93 -0.41 -0.58 16 15 C 0.13 -0.52 6.28 -4.04 -0.03 -0.55 16 16 N -0.29 0.05 3.44 -61.26 -0.21 -0.16 16 17 C -0.05 0.06 11.57 -17.04 -0.20 -0.13 16 18 C -0.05 -0.06 12.05 -17.74 -0.21 -0.27 16 19 N -0.27 -1.32 12.41 30.23 0.38 -0.95 16 20 N -0.08 -0.32 12.78 60.35 0.77 0.45 16 21 C -0.13 0.67 7.39 -25.92 -0.19 0.48 16 22 C 0.14 -0.24 10.71 -17.14 -0.18 -0.43 16 23 N -0.48 0.11 10.35 -12.91 -0.13 -0.02 16 24 C 0.13 -0.15 9.84 -17.47 -0.17 -0.33 16 25 H 0.38 -1.05 8.70 45.56 0.40 -0.66 16 26 H 0.12 -0.29 7.96 -51.93 -0.41 -0.70 16 27 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 28 H -0.25 0.25 7.01 56.52 0.40 0.64 16 29 H 0.15 0.16 7.74 -52.48 -0.41 -0.24 16 30 H 0.40 -2.32 6.80 -40.82 -0.28 -2.59 16 31 H 0.09 -0.38 7.92 -51.93 -0.41 -0.79 16 32 H 0.08 -0.05 8.14 -51.92 -0.42 -0.47 16 33 H 0.11 -0.75 7.80 -51.93 -0.41 -1.15 16 34 H 0.10 -0.51 8.14 -51.93 -0.42 -0.93 16 35 H 0.19 -1.00 8.06 -52.49 -0.42 -1.42 16 36 H 0.19 -0.34 8.06 -52.49 -0.42 -0.77 16 37 H 0.09 -0.41 8.14 -51.93 -0.42 -0.83 16 38 H 0.09 -0.66 8.08 -51.92 -0.42 -1.08 16 39 H 0.16 -0.83 6.42 -52.49 -0.34 -1.17 16 40 H 0.16 -0.51 4.85 -52.48 -0.25 -0.77 16 LS Contribution 343.95 15.07 5.18 5.18 Total: 0.00 -11.95 343.95 -7.74 -19.69 By element: Atomic # 1 Polarization: -9.10 SS G_CDS: -4.64 Total: -13.75 kcal Atomic # 6 Polarization: 1.08 SS G_CDS: -3.34 Total: -2.26 kcal Atomic # 7 Polarization: 0.48 SS G_CDS: 0.52 Total: 0.99 kcal Atomic # 8 Polarization: -2.63 SS G_CDS: -0.37 Total: -2.99 kcal Atomic # 14 Polarization: -1.78 SS G_CDS: -5.08 Total: -6.87 kcal Total LS contribution 5.18 Total: 5.18 kcal Total: -11.95 -7.74 -19.69 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_13287814.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 127.435 kcal (2) G-P(sol) polarization free energy of solvation -11.954 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 115.481 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.736 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.691 kcal (6) G-S(sol) free energy of system = (1) + (5) 107.745 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds