Wall clock time and date at job start Sun Mar 7 2021 00:33:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35990 * 117.00679 * 2 1 4 4 C 1.38561 * 120.06035 * 0.02562 * 3 2 1 5 5 C 1.38278 * 120.01542 * 180.02562 * 4 3 2 6 6 C 1.50703 * 119.92089 * 179.97438 * 5 4 3 7 7 O 1.42896 * 109.47055 * 300.00204 * 6 5 4 8 8 Si 1.86304 * 109.46911 * 180.02562 * 6 5 4 9 9 C 1.38209 * 120.15800 * 0.27978 * 5 4 3 10 10 C 1.38378 * 120.12953 * 359.48492 * 9 5 4 11 11 Cl 1.73602 * 120.01189 * 180.25798 * 10 9 5 12 12 C 1.38623 * 119.97965 * 0.49098 * 10 9 5 13 13 O 1.36019 * 120.07955 * 179.78907 * 12 10 9 14 14 C 1.42909 * 116.99990 * 269.97869 * 13 12 10 15 15 C 1.52998 * 109.46714 * 89.99990 * 14 13 12 16 16 C 1.50694 * 109.46951 * 209.99874 * 14 13 12 17 17 O 1.21286 * 120.00180 * 359.97438 * 16 14 13 18 18 N 1.34776 * 119.99907 * 180.02562 * 16 14 13 19 19 C 1.46505 * 120.00194 * 180.02562 * 18 16 14 20 20 H 1.08996 * 112.84704 * 25.33133 * 19 18 16 21 21 C 1.53775 * 113.61419 * 156.52514 * 19 18 16 22 22 C 1.53780 * 87.08285 * 139.97841 * 21 19 18 23 23 H 1.09008 * 113.60964 * 89.11278 * 22 21 19 24 24 C 1.53001 * 113.61757 * 219.93122 * 22 21 19 25 25 N 1.46498 * 109.47143 * 185.00024 * 24 22 21 26 26 C 1.35310 * 125.86736 * 124.71855 * 25 24 22 27 27 C 1.35356 * 106.17094 * 179.90568 * 26 25 24 28 28 N 1.33769 * 106.50038 * 0.35307 * 27 26 25 29 29 N 1.28631 * 108.88431 * 359.77460 * 28 27 26 30 30 C 1.53777 * 113.61296 * 254.13345 * 19 18 16 31 31 H 1.08996 * 109.47809 * 180.02562 * 1 2 3 32 32 H 1.09002 * 109.46999 * 300.00379 * 1 2 3 33 33 H 1.08998 * 109.47354 * 59.99776 * 1 2 3 34 34 H 1.07997 * 119.99351 * 0.02562 * 4 3 2 35 35 H 1.09002 * 109.47152 * 60.00012 * 6 5 4 36 36 H 0.96708 * 114.00101 * 299.99358 * 7 6 5 37 37 H 1.48501 * 109.99652 * 179.97438 * 8 6 5 38 38 H 1.48494 * 110.00064 * 301.31786 * 8 6 5 39 39 H 1.07994 * 119.93816 * 179.72644 * 9 5 4 40 40 H 1.08996 * 109.46728 * 329.99753 * 14 13 12 41 41 H 1.09001 * 109.47322 * 299.99953 * 15 14 13 42 42 H 1.08996 * 109.47717 * 60.00368 * 15 14 13 43 43 H 1.09003 * 109.46693 * 180.02562 * 15 14 13 44 44 H 0.97002 * 120.00313 * 359.97438 * 18 16 14 45 45 H 1.09004 * 113.61823 * 254.53191 * 21 19 18 46 46 H 1.08997 * 113.61760 * 25.34831 * 21 19 18 47 47 H 1.08995 * 109.47134 * 305.00360 * 24 22 21 48 48 H 1.09001 * 109.46350 * 65.00306 * 24 22 21 49 49 H 1.07991 * 126.91441 * 0.02562 * 26 25 24 50 50 H 1.08005 * 126.74666 * 180.12139 * 27 26 25 51 51 H 1.09006 * 113.61321 * 334.56461 * 30 19 18 52 52 H 1.08997 * 113.61503 * 105.47149 * 30 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 1.2932 2.3746 0.0005 5 6 1.9221 3.6061 0.0000 6 6 1.1007 4.8696 0.0000 7 8 0.2758 4.9014 -1.1664 8 14 2.2349 6.3475 -0.0016 9 6 3.3021 3.6810 -0.0069 10 6 4.0606 2.5236 -0.0026 11 17 5.7938 2.6212 -0.0045 12 6 3.4359 1.2860 -0.0015 13 8 4.1795 0.1471 -0.0016 14 6 4.5328 -0.3970 -1.2750 15 6 5.8667 0.1974 -1.7311 16 6 4.6620 -1.8942 -1.1631 17 8 4.4710 -2.4415 -0.0977 18 7 4.9910 -2.6250 -2.2466 19 6 5.1162 -4.0807 -2.1380 20 1 4.5248 -4.4966 -1.3223 21 6 4.9255 -4.8168 -3.4746 22 6 6.0778 -5.7384 -3.0414 23 1 5.7504 -6.6086 -2.4722 24 6 7.0355 -6.0986 -4.1789 25 7 8.0225 -7.0683 -3.6977 26 6 8.2782 -8.2783 -4.2468 27 6 9.2541 -8.8359 -3.4926 28 7 9.5384 -7.9548 -2.5271 29 7 8.7916 -6.9181 -2.6765 30 6 6.5714 -4.5771 -2.1594 31 1 -0.3634 -1.0276 0.0005 32 1 -0.3633 0.5139 0.8900 33 1 -0.3634 0.5138 -0.8899 34 1 0.2146 2.3192 0.0014 35 1 0.4722 4.8944 0.8902 36 1 0.7693 4.8820 -1.9979 37 1 1.4370 7.6000 -0.0022 38 1 3.1204 6.3095 1.1899 39 1 3.7895 4.6446 -0.0118 40 1 3.7584 -0.1525 -2.0020 41 1 5.7733 1.2804 -1.8120 42 1 6.6411 -0.0471 -1.0041 43 1 6.1360 -0.2172 -2.7025 44 1 5.1442 -2.1874 -3.0986 45 1 3.9661 -5.3272 -3.5591 46 1 5.1579 -4.2056 -4.3467 47 1 6.4720 -6.5329 -5.0046 48 1 7.5470 -5.1991 -4.5215 49 1 7.8011 -8.7110 -5.1136 50 1 9.7106 -9.8037 -3.6392 51 1 7.2560 -3.9007 -2.6712 52 1 6.9389 -4.8944 -1.1835 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14928172_13428712.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:33:19 Heat of formation + Delta-G solvation = 21.259322 kcal Electronic energy + Delta-G solvation = -38409.078537 eV Core-core repulsion = 33213.074792 eV Total energy + Delta-G solvation = -5196.003745 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 423.144 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -44.14034 -42.01982 -41.29571 -39.99332 -39.27672 -38.86090 -37.78060 -36.91204 -35.81053 -34.59027 -32.92843 -31.91567 -31.47593 -31.34914 -29.44775 -28.59812 -26.83193 -26.74476 -25.82813 -24.32452 -23.70415 -23.50496 -22.83790 -22.27337 -21.59881 -20.79154 -19.68002 -18.86054 -18.70031 -18.45458 -18.26382 -17.55499 -17.47530 -17.14292 -16.84512 -16.44743 -16.29337 -16.25924 -16.05164 -15.92952 -15.84507 -15.73230 -15.52844 -15.25071 -14.91947 -14.53441 -14.42119 -14.22119 -14.17419 -13.90436 -13.73914 -13.58574 -13.45644 -13.30779 -13.09837 -12.81437 -12.71941 -12.64947 -12.60575 -12.33629 -12.26526 -12.05746 -11.99448 -11.94162 -11.91237 -11.66569 -11.41343 -11.35979 -11.00531 -10.72459 -10.54337 -10.30024 -10.11715 -9.85079 -9.44933 -5.02345 -0.36107 -0.05114 0.71673 0.82192 1.24603 1.44738 1.53240 1.62120 1.65286 1.68578 1.95252 2.14125 2.21160 2.67354 3.30201 3.32623 3.42988 3.51004 3.54659 3.63930 3.67506 3.71188 3.77779 3.79756 3.82570 3.95639 3.98991 4.02272 4.05422 4.16668 4.24935 4.27316 4.28236 4.35818 4.37382 4.42678 4.56774 4.64980 4.65553 4.67999 4.70194 4.71404 4.79223 4.81689 4.86064 4.96685 5.05175 5.06391 5.12721 5.16654 5.21186 5.29797 5.51334 5.75324 5.89728 6.30462 6.49148 6.74054 7.15871 7.57431 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.323 6.323 3 C 0.118 3.882 4 C -0.164 4.164 5 C -0.063 4.063 6 C -0.066 4.066 7 O -0.547 6.547 8 Si 0.767 3.233 9 C -0.132 4.132 10 C -0.017 4.017 11 Cl -0.038 7.038 12 C 0.054 3.946 13 O -0.313 6.313 14 C 0.077 3.923 15 C -0.176 4.176 16 C 0.515 3.485 17 O -0.570 6.570 18 N -0.697 5.697 19 C 0.115 3.885 20 H 0.085 0.915 21 C -0.106 4.106 22 C -0.115 4.115 23 H 0.085 0.915 24 C 0.119 3.881 25 N -0.286 5.286 26 C -0.034 4.034 27 C -0.075 4.075 28 N -0.326 5.326 29 N -0.122 5.122 30 C -0.142 4.142 31 H 0.113 0.887 32 H 0.065 0.935 33 H 0.077 0.923 34 H 0.158 0.842 35 H 0.119 0.881 36 H 0.398 0.602 37 H -0.292 1.292 38 H -0.286 1.286 39 H 0.160 0.840 40 H 0.109 0.891 41 H 0.085 0.915 42 H 0.055 0.945 43 H 0.105 0.895 44 H 0.420 0.580 45 H 0.093 0.907 46 H 0.128 0.872 47 H 0.152 0.848 48 H 0.116 0.884 49 H 0.237 0.763 50 H 0.208 0.792 51 H 0.100 0.900 52 H 0.041 0.959 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.216 2.131 -14.772 15.810 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.236 6.236 3 C 0.071 3.929 4 C -0.182 4.182 5 C -0.064 4.064 6 C -0.177 4.177 7 O -0.355 6.355 8 Si 0.673 3.327 9 C -0.151 4.151 10 C -0.045 4.045 11 Cl -0.008 7.008 12 C 0.008 3.992 13 O -0.229 6.229 14 C 0.018 3.982 15 C -0.233 4.233 16 C 0.302 3.698 17 O -0.448 6.448 18 N -0.351 5.351 19 C 0.010 3.990 20 H 0.103 0.897 21 C -0.144 4.144 22 C -0.134 4.134 23 H 0.103 0.897 24 C 0.000 4.000 25 N -0.080 5.080 26 C -0.186 4.186 27 C -0.232 4.232 28 N -0.192 5.192 29 N -0.101 5.101 30 C -0.181 4.181 31 H 0.131 0.869 32 H 0.084 0.916 33 H 0.096 0.904 34 H 0.176 0.824 35 H 0.136 0.864 36 H 0.249 0.751 37 H -0.219 1.219 38 H -0.213 1.213 39 H 0.177 0.823 40 H 0.127 0.873 41 H 0.104 0.896 42 H 0.074 0.926 43 H 0.124 0.876 44 H 0.259 0.741 45 H 0.112 0.888 46 H 0.146 0.854 47 H 0.170 0.830 48 H 0.134 0.866 49 H 0.253 0.747 50 H 0.225 0.775 51 H 0.119 0.881 52 H 0.060 0.940 Dipole moment (debyes) X Y Z Total from point charges -4.870 3.150 -11.845 13.189 hybrid contribution -0.483 -1.037 -0.091 1.147 sum -5.353 2.113 -11.936 13.251 Atomic orbital electron populations 1.23427 0.75949 1.05645 1.02814 1.86219 1.23658 1.25823 1.87915 1.19375 0.90877 0.85971 0.96686 1.21281 1.01586 0.90130 1.05232 1.20226 0.92797 0.95903 0.97485 1.25124 0.99652 1.00835 0.92041 1.86494 1.36133 1.96746 1.16151 0.93782 0.78183 0.73742 0.87022 1.20921 0.92864 0.97327 1.03943 1.20984 0.86195 0.93188 1.04115 1.98393 1.07931 1.98311 1.96205 1.17835 0.87062 0.85650 1.08622 1.86246 1.69904 1.38248 1.28530 1.22342 1.00191 0.89964 0.85714 1.22587 0.94298 1.03532 1.02879 1.20694 0.75665 0.89299 0.84188 1.90740 1.50467 1.73697 1.29917 1.45697 1.70308 1.07131 1.11985 1.22481 0.97037 0.79213 1.00290 0.89726 1.23279 0.98457 0.96269 0.96406 1.22543 0.96658 0.97596 0.96645 0.89704 1.22601 0.87414 0.92354 0.97658 1.47889 1.26509 1.14722 1.18904 1.24437 1.02426 0.87191 1.04524 1.24232 1.01152 1.02971 0.94891 1.75096 1.20260 1.00120 1.23677 1.78284 1.04494 1.20379 1.06968 1.23555 0.96853 0.97570 1.00120 0.86908 0.91647 0.90431 0.82431 0.86363 0.75132 1.21929 1.21303 0.82281 0.87311 0.89597 0.92560 0.87638 0.74120 0.88800 0.85423 0.83036 0.86554 0.74660 0.77475 0.88148 0.94025 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.81 113.37 1.11 1.07 16 2 O -0.32 -2.01 10.28 -79.57 -0.82 -2.83 16 3 C 0.12 0.55 6.70 22.56 0.15 0.70 16 4 C -0.16 0.04 8.60 22.36 0.19 0.23 16 5 C -0.06 0.13 5.39 -19.86 -0.11 0.02 16 6 C -0.07 0.27 2.82 71.24 0.20 0.47 16 7 O -0.55 2.52 12.76 -148.98 -1.90 0.61 16 8 Si 0.77 -3.41 29.78 68.60 2.04 -1.36 16 9 C -0.13 0.16 8.45 22.30 0.19 0.35 16 10 C -0.02 -0.05 6.24 22.40 0.14 0.09 16 11 Cl -0.04 -0.11 24.90 -2.72 -0.07 -0.17 16 12 C 0.05 0.35 5.56 22.58 0.13 0.48 16 13 O -0.31 -3.32 8.55 -67.36 -0.58 -3.89 16 14 C 0.08 0.22 3.20 29.85 0.10 0.32 16 15 C -0.18 0.37 8.29 71.98 0.60 0.96 16 16 C 0.52 3.50 7.23 87.66 0.63 4.14 16 17 O -0.57 -10.72 16.12 15.99 0.26 -10.47 16 18 N -0.70 1.87 5.25 -440.05 -2.31 -0.45 16 19 C 0.11 -0.20 4.21 45.51 0.19 -0.01 16 20 H 0.08 0.45 7.50 -2.39 -0.02 0.43 16 21 C -0.11 1.17 7.39 31.12 0.23 1.40 16 22 C -0.11 0.75 3.76 -10.21 -0.04 0.71 16 23 H 0.08 -0.21 8.14 -2.38 -0.02 -0.23 16 24 C 0.12 -1.19 6.30 86.38 0.54 -0.64 16 25 N -0.29 0.14 3.44 -347.75 -1.20 -1.05 16 26 C -0.03 0.13 11.57 83.49 0.97 1.09 16 27 C -0.07 -0.21 12.05 83.73 1.01 0.79 16 28 N -0.33 -4.00 12.41 -58.25 -0.72 -4.72 16 29 N -0.12 -1.18 12.93 37.02 0.48 -0.70 16 30 C -0.14 0.11 7.45 31.18 0.23 0.34 16 31 H 0.11 -0.50 8.14 -2.39 -0.02 -0.52 16 32 H 0.06 -0.25 7.66 -2.39 -0.02 -0.27 16 33 H 0.08 -0.49 7.66 -2.39 -0.02 -0.51 16 34 H 0.16 -0.52 6.30 -2.91 -0.02 -0.54 16 35 H 0.12 -0.41 7.96 -2.39 -0.02 -0.43 16 36 H 0.40 -5.08 8.70 -74.05 -0.64 -5.73 16 37 H -0.29 -0.79 7.11 99.48 0.71 -0.08 16 38 H -0.29 -0.34 7.11 99.48 0.71 0.36 16 39 H 0.16 -0.80 4.86 -2.91 -0.01 -0.82 16 40 H 0.11 -0.20 7.91 -2.39 -0.02 -0.21 16 41 H 0.09 -0.22 5.45 -2.39 -0.01 -0.23 16 42 H 0.06 0.13 8.14 -2.39 -0.02 0.12 16 43 H 0.11 -0.98 7.56 -2.39 -0.02 -1.00 16 44 H 0.42 -4.65 8.13 -92.71 -0.75 -5.40 16 45 H 0.09 -1.10 8.14 -2.38 -0.02 -1.12 16 46 H 0.13 -2.21 8.07 -2.39 -0.02 -2.23 16 47 H 0.15 -2.74 8.07 -2.39 -0.02 -2.76 16 48 H 0.12 -1.43 7.86 -2.39 -0.02 -1.45 16 49 H 0.24 -3.38 8.06 -2.92 -0.02 -3.40 16 50 H 0.21 -0.66 8.06 -2.91 -0.02 -0.68 16 51 H 0.10 -0.32 7.91 -2.38 -0.02 -0.34 16 52 H 0.04 0.31 8.14 -2.39 -0.02 0.29 16 Total: 0.00 -40.55 444.09 1.29 -39.26 By element: Atomic # 1 Polarization: -26.40 SS G_CDS: -0.36 Total: -26.76 kcal Atomic # 6 Polarization: 6.06 SS G_CDS: 6.46 Total: 12.53 kcal Atomic # 7 Polarization: -3.17 SS G_CDS: -3.75 Total: -6.92 kcal Atomic # 8 Polarization: -13.54 SS G_CDS: -3.04 Total: -16.57 kcal Atomic # 14 Polarization: -3.41 SS G_CDS: 2.04 Total: -1.36 kcal Atomic # 17 Polarization: -0.11 SS G_CDS: -0.07 Total: -0.17 kcal Total: -40.55 1.29 -39.26 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_13428712.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 60.522 kcal (2) G-P(sol) polarization free energy of solvation -40.553 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.969 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.290 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.263 kcal (6) G-S(sol) free energy of system = (1) + (5) 21.259 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds