Wall clock time and date at job start Sun Mar 7 2021 00:33:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86307 * 109.46920 * 2 1 4 4 C 1.50701 * 109.47211 * 119.99779 * 2 1 3 5 5 C 1.32693 * 124.68656 * 65.30413 * 4 2 1 6 6 C 1.44506 * 113.09986 * 180.19267 * 5 4 2 7 7 C 1.47044 * 123.49185 * 179.76924 * 6 5 4 8 8 O 1.21650 * 120.00163 * 179.73761 * 7 6 5 9 9 N 1.34775 * 120.00129 * 359.72712 * 7 6 5 10 10 C 1.46500 * 120.00400 * 180.02562 * 9 7 6 11 11 H 1.09004 * 112.84406 * 336.20132 * 10 9 7 12 12 C 1.53781 * 113.69047 * 107.46338 * 10 9 7 13 13 C 1.53787 * 87.07799 * 139.99669 * 12 10 9 14 14 H 1.08992 * 113.69024 * 89.13054 * 13 12 10 15 15 C 1.53000 * 113.61239 * 220.02294 * 13 12 10 16 16 N 1.46499 * 109.46840 * 272.49433 * 15 13 12 17 17 C 1.35321 * 125.86767 * 124.71639 * 16 15 13 18 18 C 1.35347 * 106.17391 * 179.90528 * 17 16 15 19 19 N 1.33764 * 106.49693 * 0.35216 * 18 17 16 20 20 N 1.28630 * 108.89205 * 359.77699 * 19 18 17 21 21 C 1.53776 * 113.61566 * 205.00567 * 10 9 7 22 22 C 1.36222 * 113.01379 * 359.50110 * 6 5 4 23 23 Cl 1.73602 * 124.60332 * 180.28580 * 22 6 5 24 24 S 1.70445 * 110.79208 * 0.26886 * 22 6 5 25 25 H 0.96700 * 114.00447 * 299.99860 * 1 2 3 26 26 H 1.08995 * 109.47362 * 239.99819 * 2 1 3 27 27 H 1.48494 * 109.99942 * 178.67996 * 3 2 1 28 28 H 1.48503 * 109.99742 * 299.99731 * 3 2 1 29 29 H 1.08002 * 123.44770 * 359.96386 * 5 4 2 30 30 H 0.97002 * 119.99626 * 0.02562 * 9 7 6 31 31 H 1.08998 * 113.61029 * 25.45404 * 12 10 9 32 32 H 1.08997 * 113.61702 * 254.54562 * 12 10 9 33 33 H 1.09002 * 109.47398 * 32.49759 * 15 13 12 34 34 H 1.09001 * 109.47194 * 152.49940 * 15 13 12 35 35 H 1.08006 * 126.90795 * 0.02562 * 17 16 15 36 36 H 1.08000 * 126.74947 * 180.12771 * 18 17 16 37 37 H 1.08999 * 113.61671 * 105.38832 * 21 10 9 38 38 H 1.08993 * 113.61590 * 334.47649 * 21 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.7533 -2.0008 1.4830 6 6 2.3357 -2.4186 2.7378 7 6 2.2687 -3.7974 3.2443 8 8 2.7860 -4.0804 4.3084 9 7 1.6341 -4.7477 2.5298 10 6 1.5669 -6.1214 3.0346 11 1 2.3693 -6.3548 3.7344 12 6 0.1720 -6.5266 3.5393 13 6 0.4184 -7.8953 2.8829 14 1 0.9066 -8.6147 3.5402 15 6 -0.8149 -8.4707 2.1839 16 7 -1.6108 -9.2343 3.1480 17 6 -2.9199 -9.0371 3.4283 18 6 -3.2474 -9.9567 4.3659 19 7 -2.1355 -10.6570 4.6158 20 7 -1.1837 -10.2045 3.8783 21 6 1.3871 -7.1756 1.9296 22 6 2.9581 -1.4039 3.4001 23 17 3.7630 -1.5720 4.9290 24 16 2.8397 0.0531 2.5235 25 1 -0.3934 0.4417 0.7650 26 1 1.7923 -0.5138 -0.8899 27 1 3.5345 1.7704 0.0321 28 1 1.5614 2.4679 -1.2086 29 1 1.2239 -2.6695 0.8205 30 1 1.2218 -4.5221 1.6812 31 1 -0.6395 -5.9620 3.0802 32 1 0.0965 -6.5707 4.6258 33 1 -1.4166 -7.6565 1.7799 34 1 -0.4997 -9.1268 1.3725 35 1 -3.5726 -8.2964 2.9902 36 1 -4.2152 -10.0951 4.8248 37 1 2.2927 -7.7437 1.7166 38 1 0.9078 -6.7885 1.0305 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14928172_13431040.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:33:25 Heat of formation + Delta-G solvation = 97.234919 kcal Electronic energy + Delta-G solvation = -25642.191684 eV Core-core repulsion = 21642.611975 eV Total energy + Delta-G solvation = -3999.579709 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.054 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -44.13745 -41.45552 -40.06171 -38.88875 -37.93605 -37.05636 -35.82437 -34.24413 -31.92892 -31.78142 -29.72428 -27.09247 -27.01266 -26.39495 -24.21495 -23.54912 -22.47377 -22.10559 -21.19717 -20.47769 -19.45924 -18.79681 -18.14876 -17.88685 -17.53892 -16.90418 -16.61050 -16.52280 -16.03477 -15.90785 -15.81354 -15.72073 -15.11894 -14.91011 -14.85032 -14.41294 -14.33164 -14.18698 -13.86761 -13.73941 -13.17199 -13.07531 -12.69832 -12.61109 -12.45550 -12.42902 -12.18098 -12.10734 -11.97764 -11.79971 -11.74362 -10.99035 -10.89733 -10.72086 -10.29384 -10.19472 -9.98133 -9.75821 -5.36503 -0.66836 -0.27300 0.36249 0.61100 0.67907 0.97175 1.03176 1.34571 1.39622 1.71830 1.71865 2.07888 2.18110 3.06511 3.08807 3.16373 3.30309 3.33122 3.51460 3.57593 3.72115 3.74954 3.78247 3.87229 4.06771 4.14631 4.15411 4.27767 4.32853 4.35834 4.49704 4.55449 4.58824 4.68667 4.79847 4.81410 4.82096 5.03941 5.26273 5.38453 5.61611 6.24515 6.35044 7.12307 7.62127 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.024 4.024 3 Si 0.651 3.349 4 C -0.236 4.236 5 C -0.071 4.071 6 C -0.162 4.162 7 C 0.577 3.423 8 O -0.516 6.516 9 N -0.715 5.715 10 C 0.129 3.871 11 H 0.121 0.879 12 C -0.148 4.148 13 C -0.124 4.124 14 H 0.114 0.886 15 C 0.127 3.873 16 N -0.289 5.289 17 C -0.051 4.051 18 C -0.051 4.051 19 N -0.271 5.271 20 N -0.084 5.084 21 C -0.135 4.135 22 C -0.114 4.114 23 Cl 0.028 6.972 24 S 0.238 5.762 25 H 0.383 0.617 26 H 0.128 0.872 27 H -0.234 1.234 28 H -0.228 1.228 29 H 0.156 0.844 30 H 0.400 0.600 31 H 0.088 0.912 32 H 0.076 0.924 33 H 0.107 0.893 34 H 0.103 0.897 35 H 0.190 0.810 36 H 0.190 0.810 37 H 0.086 0.914 38 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.345 6.185 -5.839 9.140 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.137 4.137 3 Si 0.550 3.450 4 C -0.353 4.353 5 C -0.100 4.100 6 C -0.180 4.180 7 C 0.362 3.638 8 O -0.392 6.392 9 N -0.366 5.366 10 C 0.024 3.976 11 H 0.139 0.861 12 C -0.187 4.187 13 C -0.144 4.144 14 H 0.132 0.868 15 C 0.006 3.994 16 N -0.083 5.083 17 C -0.202 4.202 18 C -0.208 4.208 19 N -0.137 5.137 20 N -0.064 5.064 21 C -0.174 4.174 22 C -0.260 4.260 23 Cl 0.057 6.943 24 S 0.503 5.497 25 H 0.231 0.769 26 H 0.145 0.855 27 H -0.158 1.158 28 H -0.151 1.151 29 H 0.174 0.826 30 H 0.236 0.764 31 H 0.107 0.893 32 H 0.095 0.905 33 H 0.126 0.874 34 H 0.122 0.878 35 H 0.207 0.793 36 H 0.207 0.793 37 H 0.105 0.895 38 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -0.564 6.864 -5.290 8.684 hybrid contribution -1.599 -1.213 -0.985 2.236 sum -2.163 5.651 -6.276 8.718 Atomic orbital electron populations 1.86536 1.16335 1.81647 1.49298 1.24423 0.85363 1.09157 0.94806 0.95074 0.82438 0.77230 0.90293 1.24802 1.08964 0.98696 1.02865 1.20980 0.99158 0.95009 0.94839 1.20219 1.06113 0.94821 0.96870 1.17444 0.78285 0.83775 0.84247 1.90890 1.45294 1.81608 1.21368 1.45772 1.57441 1.08852 1.24563 1.22436 0.98462 0.79757 0.96978 0.86108 1.23608 0.98015 0.94959 1.02119 1.22745 0.95224 0.97165 0.99240 0.86753 1.22181 0.92305 0.95447 0.89505 1.47503 1.08617 1.23628 1.28539 1.23717 0.86757 1.05689 1.04067 1.23680 1.00044 0.96483 1.00641 1.75160 0.97874 1.22774 1.17914 1.78305 1.22181 1.01619 1.04271 1.23368 0.99981 0.96702 0.97304 1.25554 1.03659 1.00564 0.96266 1.98448 1.75700 1.97283 1.22865 1.83319 1.50464 1.06366 1.09567 0.76946 0.85486 1.15823 1.15109 0.82638 0.76438 0.89331 0.90480 0.87447 0.87838 0.79326 0.79318 0.89526 0.88937 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 1.53 12.88 -35.23 -0.45 1.08 16 2 C -0.02 0.08 2.94 36.01 0.11 0.18 16 3 Si 0.65 -2.04 30.92 -169.99 -5.26 -7.29 16 4 C -0.24 0.57 5.65 -36.20 -0.20 0.36 16 5 C -0.07 0.15 9.75 -39.00 -0.38 -0.23 16 6 C -0.16 -0.08 5.98 -104.59 -0.63 -0.70 16 7 C 0.58 1.01 7.79 -12.69 -0.10 0.91 16 8 O -0.52 -2.81 14.51 5.23 0.08 -2.73 16 9 N -0.71 1.23 5.34 -54.21 -0.29 0.94 16 10 C 0.13 -0.23 4.24 -67.12 -0.28 -0.51 16 11 H 0.12 0.06 7.46 -51.93 -0.39 -0.33 16 12 C -0.15 0.33 7.43 -25.92 -0.19 0.14 16 13 C -0.12 0.37 3.84 -89.80 -0.34 0.02 16 14 H 0.11 -0.10 7.91 -51.93 -0.41 -0.51 16 15 C 0.13 -0.46 6.29 -4.04 -0.03 -0.48 16 16 N -0.29 -0.07 3.44 -61.26 -0.21 -0.28 16 17 C -0.05 0.04 11.57 -17.04 -0.20 -0.15 16 18 C -0.05 -0.07 12.05 -17.74 -0.21 -0.29 16 19 N -0.27 -1.41 12.41 30.23 0.38 -1.03 16 20 N -0.08 -0.35 12.76 60.35 0.77 0.42 16 21 C -0.13 0.57 7.39 -25.92 -0.19 0.38 16 22 C -0.11 -0.12 6.87 30.01 0.21 0.08 16 23 Cl 0.03 0.08 27.20 -51.86 -1.41 -1.33 16 24 S 0.24 -0.40 20.19 -107.50 -2.17 -2.57 16 25 H 0.38 -2.45 8.70 45.56 0.40 -2.05 16 26 H 0.13 -0.43 7.96 -51.93 -0.41 -0.84 16 27 H -0.23 0.22 7.11 56.52 0.40 0.62 16 28 H -0.23 0.08 7.11 56.52 0.40 0.48 16 29 H 0.16 -0.69 7.10 -52.49 -0.37 -1.06 16 30 H 0.40 -1.80 7.27 -40.82 -0.30 -2.10 16 31 H 0.09 -0.31 7.90 -51.93 -0.41 -0.72 16 32 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 33 H 0.11 -0.68 7.77 -51.93 -0.40 -1.08 16 34 H 0.10 -0.46 8.14 -51.93 -0.42 -0.88 16 35 H 0.19 -0.92 8.06 -52.48 -0.42 -1.34 16 36 H 0.19 -0.29 8.06 -52.49 -0.42 -0.72 16 37 H 0.09 -0.34 8.14 -51.93 -0.42 -0.76 16 38 H 0.09 -0.57 8.08 -51.93 -0.42 -0.99 16 LS Contribution 356.33 15.07 5.37 5.37 Total: 0.00 -10.74 356.33 -9.68 -20.42 By element: Atomic # 1 Polarization: -8.67 SS G_CDS: -4.03 Total: -12.70 kcal Atomic # 6 Polarization: 2.16 SS G_CDS: -2.45 Total: -0.29 kcal Atomic # 7 Polarization: -0.60 SS G_CDS: 0.65 Total: 0.04 kcal Atomic # 8 Polarization: -1.27 SS G_CDS: -0.38 Total: -1.65 kcal Atomic # 14 Polarization: -2.04 SS G_CDS: -5.26 Total: -7.29 kcal Atomic # 16 Polarization: -0.40 SS G_CDS: -2.17 Total: -2.57 kcal Atomic # 17 Polarization: 0.08 SS G_CDS: -1.41 Total: -1.33 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -10.74 -9.68 -20.42 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_13431040.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 117.655 kcal (2) G-P(sol) polarization free energy of solvation -10.745 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 106.910 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.675 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.420 kcal (6) G-S(sol) free energy of system = (1) + (5) 97.235 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds