Wall clock time and date at job start Sun Mar 7 2021 00:33:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86296 * 109.47337 * 2 1 4 4 C 1.50701 * 109.47247 * 119.99915 * 2 1 3 5 5 C 1.31115 * 118.54742 * 249.97992 * 4 2 1 6 6 N 1.38925 * 121.84921 * 180.42400 * 5 4 2 7 7 C 1.47030 * 118.88355 * 346.68340 * 6 5 4 8 8 C 1.50695 * 109.87337 * 163.23296 * 7 6 5 9 9 O 1.21286 * 119.99919 * 340.89548 * 8 7 6 10 10 N 1.34776 * 120.00427 * 160.89905 * 8 7 6 11 11 C 1.46503 * 120.00614 * 180.02562 * 10 8 7 12 12 H 1.09004 * 112.84488 * 23.79936 * 11 10 8 13 13 C 1.53777 * 113.61702 * 155.00075 * 11 10 8 14 14 C 1.53778 * 87.08224 * 139.98255 * 13 11 10 15 15 H 1.09000 * 113.61596 * 89.19529 * 14 13 11 16 16 C 1.52998 * 113.61183 * 220.01845 * 14 13 11 17 17 N 1.46496 * 109.47182 * 184.99524 * 16 14 13 18 18 C 1.35314 * 125.86747 * 124.99617 * 17 16 14 19 19 C 1.35351 * 106.17952 * 180.02562 * 18 17 16 20 20 N 1.33777 * 106.49333 * 0.02562 * 19 18 17 21 21 N 1.28636 * 108.88516 * 359.73304 * 20 19 18 22 22 C 1.53779 * 113.61293 * 252.49815 * 11 10 8 23 23 C 1.53544 * 107.65748 * 43.66645 * 7 6 5 24 24 C 1.50208 * 118.54604 * 69.99720 * 4 2 1 25 25 H 0.96699 * 114.00499 * 300.00163 * 1 2 3 26 26 H 1.09003 * 109.47100 * 239.99459 * 2 1 3 27 27 H 1.48501 * 109.99663 * 299.99659 * 3 2 1 28 28 H 1.48498 * 110.00218 * 61.31538 * 3 2 1 29 29 H 1.08001 * 119.07514 * 0.45124 * 5 4 2 30 30 H 0.97002 * 120.55853 * 166.70800 * 6 5 4 31 31 H 1.09002 * 109.82341 * 284.12636 * 7 6 5 32 32 H 0.97002 * 119.99777 * 359.97438 * 10 8 7 33 33 H 1.09002 * 113.61066 * 254.53170 * 13 11 10 34 34 H 1.08995 * 113.61148 * 25.34416 * 13 11 10 35 35 H 1.08997 * 109.47376 * 304.99461 * 16 14 13 36 36 H 1.09004 * 109.47144 * 64.99645 * 16 14 13 37 37 H 1.07999 * 126.91480 * 359.97438 * 18 17 16 38 38 H 1.07995 * 126.75998 * 180.02562 * 19 18 17 39 39 H 1.09002 * 113.61369 * 334.56386 * 22 11 10 40 40 H 1.09005 * 113.61551 * 105.46912 * 22 11 10 41 41 H 1.08993 * 109.62385 * 58.77149 * 23 7 6 42 42 H 1.09000 * 109.61775 * 179.13974 * 23 7 6 43 43 H 1.08991 * 109.33119 * 39.67119 * 24 4 2 44 44 H 1.08997 * 109.32938 * 280.18736 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.5119 -0.0029 2.1693 6 7 3.0078 -0.5882 3.3275 7 6 2.6237 -1.9715 3.6448 8 6 3.5624 -2.5398 4.6776 9 8 4.6454 -2.0254 4.8612 10 7 3.1987 -3.6196 5.3974 11 6 4.1110 -4.1718 6.4019 12 1 4.8286 -3.4387 6.7704 13 6 3.3981 -4.9516 7.5193 14 6 4.5518 -5.9652 7.4402 15 1 5.3904 -5.7242 8.0936 16 6 4.0984 -7.4209 7.5677 17 7 5.2722 -8.2969 7.6004 18 6 5.5589 -9.2027 8.5639 19 6 6.7252 -9.7848 8.1993 20 7 7.0905 -9.2137 7.0461 21 7 6.2059 -8.3401 6.7155 22 6 4.7503 -5.5070 5.9857 23 6 2.7181 -2.7899 2.3491 24 6 1.7451 -2.1977 1.3269 25 1 -0.3934 0.4417 0.7650 26 1 1.7923 -0.5139 -0.8900 27 1 1.5615 2.4677 -1.2086 28 1 1.5879 2.4586 1.2242 29 1 2.6070 1.0650 2.0387 30 1 3.5973 -0.0924 3.9172 31 1 1.6014 -1.9939 4.0225 32 1 2.3324 -4.0308 5.2509 33 1 3.3532 -4.4142 8.4665 34 1 2.4338 -5.3612 7.2189 35 1 3.5273 -7.5443 8.4879 36 1 3.4733 -7.6829 6.7141 37 1 4.9750 -9.4175 9.4467 38 1 7.2565 -10.5581 8.7341 39 1 4.1562 -6.0699 5.2657 40 1 5.7971 -5.4181 5.6949 41 1 3.7343 -2.7407 1.9583 42 1 2.4537 -3.8278 2.5517 43 1 1.9282 -2.6483 0.3515 44 1 0.7222 -2.4140 1.6351 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14928172_15413834.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:33:39 Heat of formation + Delta-G solvation = 81.594889 kcal Electronic energy + Delta-G solvation = -26368.072384 eV Core-core repulsion = 22518.413151 eV Total energy + Delta-G solvation = -3849.659233 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.164 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -44.14603 -41.58984 -40.30082 -39.18017 -37.45826 -35.81185 -34.43777 -33.21920 -32.82950 -31.92120 -29.59960 -27.55570 -26.73894 -25.53385 -24.65402 -23.63554 -23.44763 -22.34804 -21.66484 -20.82613 -19.38990 -19.09296 -18.58851 -18.05836 -17.54001 -17.11729 -16.73627 -16.44992 -16.14973 -16.06403 -15.78315 -15.76050 -15.29465 -15.20558 -15.09712 -14.52311 -14.38390 -14.04930 -13.95251 -13.73555 -13.45709 -13.16138 -13.00309 -12.92274 -12.61772 -12.39811 -12.28888 -11.99204 -11.96161 -11.91716 -11.65982 -11.41268 -11.25706 -11.01882 -10.84604 -10.30670 -10.30101 -10.11219 -8.46789 -4.89467 0.70941 1.32375 1.40032 1.44672 1.53807 1.55645 1.64583 1.91460 1.98114 2.64210 3.30370 3.43344 3.49199 3.57309 3.63191 3.67282 3.74351 3.80991 3.88874 4.01301 4.04694 4.16319 4.26369 4.30991 4.35189 4.36848 4.45957 4.62143 4.67231 4.70527 4.72691 4.77395 4.79134 4.85162 4.96571 5.03101 5.05212 5.15537 5.24425 5.29181 5.29921 5.51282 5.57624 5.74521 6.24339 6.46505 6.65031 6.81287 7.11929 7.56641 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.055 4.055 3 Si 0.741 3.259 4 C -0.282 4.282 5 C 0.137 3.863 6 N -0.738 5.738 7 C 0.139 3.861 8 C 0.512 3.488 9 O -0.576 6.576 10 N -0.699 5.699 11 C 0.116 3.884 12 H 0.090 0.910 13 C -0.109 4.109 14 C -0.116 4.116 15 H 0.085 0.915 16 C 0.118 3.882 17 N -0.286 5.286 18 C -0.035 4.035 19 C -0.074 4.074 20 N -0.326 5.326 21 N -0.120 5.120 22 C -0.141 4.141 23 C -0.121 4.121 24 C -0.051 4.051 25 H 0.382 0.618 26 H 0.110 0.890 27 H -0.311 1.311 28 H -0.282 1.282 29 H 0.141 0.859 30 H 0.407 0.593 31 H 0.112 0.888 32 H 0.421 0.579 33 H 0.092 0.908 34 H 0.125 0.875 35 H 0.149 0.851 36 H 0.115 0.885 37 H 0.236 0.764 38 H 0.208 0.792 39 H 0.099 0.901 40 H 0.043 0.957 41 H 0.057 0.943 42 H 0.099 0.901 43 H 0.071 0.929 44 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.990 -2.917 7.183 10.439 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.165 4.165 3 Si 0.649 3.351 4 C -0.292 4.292 5 C 0.016 3.984 6 N -0.370 5.370 7 C 0.030 3.970 8 C 0.298 3.702 9 O -0.455 6.455 10 N -0.350 5.350 11 C 0.010 3.990 12 H 0.108 0.892 13 C -0.148 4.148 14 C -0.136 4.136 15 H 0.104 0.896 16 C -0.001 4.001 17 N -0.081 5.081 18 C -0.186 4.186 19 C -0.232 4.232 20 N -0.191 5.191 21 N -0.100 5.100 22 C -0.180 4.180 23 C -0.160 4.160 24 C -0.088 4.088 25 H 0.231 0.769 26 H 0.128 0.872 27 H -0.240 1.240 28 H -0.209 1.209 29 H 0.158 0.842 30 H 0.243 0.757 31 H 0.129 0.871 32 H 0.259 0.741 33 H 0.110 0.890 34 H 0.143 0.857 35 H 0.167 0.833 36 H 0.134 0.866 37 H 0.252 0.748 38 H 0.225 0.775 39 H 0.117 0.883 40 H 0.062 0.938 41 H 0.076 0.924 42 H 0.118 0.882 43 H 0.090 0.910 44 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -5.892 -1.557 5.447 8.174 hybrid contribution -1.102 -0.328 1.389 1.803 sum -6.994 -1.885 6.836 9.960 Atomic orbital electron populations 1.86543 1.19549 1.80186 1.50081 1.24825 0.82739 1.09799 0.99166 0.94413 0.91099 0.73750 0.75823 1.20914 1.13943 0.96585 0.97791 1.20602 0.94837 0.96852 0.86072 1.44393 1.54745 1.12766 1.25098 1.21112 0.97696 0.83898 0.94331 1.20931 0.87158 0.80471 0.81603 1.90731 1.24699 1.61520 1.68540 1.45780 1.21271 1.29958 1.38026 1.22470 0.93210 0.93740 0.89548 0.89227 1.23288 0.98075 0.94660 0.98738 1.22521 1.00246 0.92985 0.97800 0.89648 1.22601 0.82531 0.86778 1.08193 1.47886 1.18659 1.26666 1.14858 1.24427 1.00549 0.94898 0.98776 1.24228 0.97954 1.05255 0.95792 1.75099 1.21431 1.07300 1.15255 1.78269 0.96933 1.18522 1.16250 1.23513 1.00992 0.96577 0.96916 1.21834 1.00684 0.99696 0.93756 1.19937 0.98686 0.91240 0.98945 0.76913 0.87172 1.23980 1.20941 0.84211 0.75692 0.87075 0.74126 0.88974 0.85723 0.83271 0.86647 0.74762 0.77487 0.88251 0.93778 0.92368 0.88244 0.90996 0.91052 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.87 12.88 -148.98 -1.92 -3.79 16 2 C -0.05 -0.03 2.81 71.24 0.20 0.17 16 3 Si 0.74 -0.08 29.97 68.60 2.06 1.98 16 4 C -0.28 0.13 5.37 -16.76 -0.09 0.04 16 5 C 0.14 -0.11 9.61 83.41 0.80 0.69 16 6 N -0.74 0.17 5.47 -329.00 -1.80 -1.63 16 7 C 0.14 -0.44 3.36 44.33 0.15 -0.29 16 8 C 0.51 0.07 7.09 87.66 0.62 0.69 16 9 O -0.58 -5.65 15.69 -3.05 -0.05 -5.70 16 10 N -0.70 4.65 5.35 -440.04 -2.36 2.29 16 11 C 0.12 -0.57 4.24 45.52 0.19 -0.38 16 12 H 0.09 0.12 7.46 -2.38 -0.02 0.10 16 13 C -0.11 1.38 7.39 31.12 0.23 1.61 16 14 C -0.12 0.94 3.77 -10.27 -0.04 0.90 16 15 H 0.09 -0.35 8.14 -2.39 -0.02 -0.37 16 16 C 0.12 -1.28 6.29 86.38 0.54 -0.74 16 17 N -0.29 0.40 3.44 -347.74 -1.20 -0.80 16 18 C -0.04 0.15 11.57 83.49 0.97 1.12 16 19 C -0.07 -0.16 12.05 83.73 1.01 0.85 16 20 N -0.33 -3.65 12.41 -58.26 -0.72 -4.38 16 21 N -0.12 -1.02 12.94 37.02 0.48 -0.54 16 22 C -0.14 0.48 7.43 31.12 0.23 0.71 16 23 C -0.12 0.41 5.47 30.79 0.17 0.57 16 24 C -0.05 0.10 5.85 29.71 0.17 0.27 16 25 H 0.38 -0.96 8.70 -74.06 -0.64 -1.60 16 26 H 0.11 0.03 7.96 -2.39 -0.02 0.01 16 27 H -0.31 -2.62 7.11 99.48 0.71 -1.92 16 28 H -0.28 -0.76 6.82 99.48 0.68 -0.09 16 29 H 0.14 -0.39 4.31 -2.91 -0.01 -0.41 16 30 H 0.41 0.35 8.10 -92.71 -0.75 -0.41 16 31 H 0.11 -0.84 8.14 -2.39 -0.02 -0.86 16 32 H 0.42 -5.80 8.73 -92.71 -0.81 -6.61 16 33 H 0.09 -1.20 8.14 -2.39 -0.02 -1.22 16 34 H 0.12 -2.28 8.08 -2.39 -0.02 -2.30 16 35 H 0.15 -2.76 8.07 -2.39 -0.02 -2.78 16 36 H 0.12 -1.50 7.84 -2.38 -0.02 -1.52 16 37 H 0.24 -3.46 8.06 -2.91 -0.02 -3.49 16 38 H 0.21 -0.80 8.06 -2.91 -0.02 -0.82 16 39 H 0.10 -0.54 7.90 -2.39 -0.02 -0.56 16 40 H 0.04 0.19 8.14 -2.38 -0.02 0.17 16 41 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 42 H 0.10 -0.78 8.14 -2.39 -0.02 -0.79 16 43 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 44 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 Total: 0.00 -30.54 362.77 -1.49 -32.03 By element: Atomic # 1 Polarization: -24.56 SS G_CDS: -1.15 Total: -25.71 kcal Atomic # 6 Polarization: 1.06 SS G_CDS: 5.16 Total: 6.22 kcal Atomic # 7 Polarization: 0.55 SS G_CDS: -5.59 Total: -5.05 kcal Atomic # 8 Polarization: -7.52 SS G_CDS: -1.97 Total: -9.48 kcal Atomic # 14 Polarization: -0.08 SS G_CDS: 2.06 Total: 1.98 kcal Total: -30.54 -1.49 -32.03 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_15413834.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 113.629 kcal (2) G-P(sol) polarization free energy of solvation -30.541 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 83.088 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.493 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.034 kcal (6) G-S(sol) free energy of system = (1) + (5) 81.595 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds