Wall clock time and date at job start Sun Mar 7 2021 00:34:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86303 * 109.46859 * 2 1 4 4 C 1.50700 * 109.46728 * 240.00744 * 2 1 3 5 5 C 1.38251 * 119.94410 * 120.01961 * 4 2 1 6 6 C 1.38167 * 120.05602 * 179.72051 * 5 4 2 7 7 C 1.38719 * 119.94199 * 0.52959 * 6 5 4 8 8 O 1.35900 * 120.05451 * 179.74511 * 7 6 5 9 9 C 1.42894 * 116.99998 * 359.72235 * 8 7 6 10 10 C 1.50704 * 109.47027 * 179.97438 * 9 8 7 11 11 O 1.21280 * 119.99686 * 0.02562 * 10 9 8 12 12 N 1.34776 * 119.99824 * 180.02562 * 10 9 8 13 13 C 1.46499 * 119.99725 * 180.02562 * 12 10 9 14 14 H 1.08997 * 112.85535 * 336.19829 * 13 12 10 15 15 C 1.53958 * 113.66742 * 107.44286 * 13 12 10 16 16 C 1.53781 * 87.02081 * 139.93141 * 15 13 12 17 17 H 1.08997 * 113.61020 * 89.23023 * 16 15 13 18 18 C 1.52995 * 113.61367 * 220.04892 * 16 15 13 19 19 N 1.46506 * 109.47276 * 274.13740 * 18 16 15 20 20 C 1.35312 * 125.86709 * 124.71314 * 19 18 16 21 21 C 1.35352 * 106.17240 * 179.90780 * 20 19 18 22 22 N 1.33775 * 106.49643 * 0.35153 * 21 20 19 23 23 N 1.28629 * 108.88590 * 359.77853 * 22 21 20 24 24 C 1.53777 * 87.17042 * 334.63924 * 16 15 13 25 25 C 1.38752 * 119.88680 * 359.47057 * 7 6 5 26 26 N 1.48002 * 120.02601 * 180.23436 * 25 7 6 27 27 O 1.21801 * 119.99865 * 179.97438 * 26 25 7 28 28 O 1.21800 * 120.00218 * 359.97438 * 26 25 7 29 29 C 1.38129 * 119.94631 * 0.25446 * 25 7 6 30 30 H 0.96694 * 114.00383 * 59.99744 * 1 2 3 31 31 H 1.08996 * 109.47553 * 120.00243 * 2 1 3 32 32 H 1.48507 * 109.99680 * 60.00399 * 3 2 1 33 33 H 1.48498 * 110.00050 * 181.32188 * 3 2 1 34 34 H 1.07999 * 119.97073 * 359.97438 * 5 4 2 35 35 H 1.07995 * 120.02883 * 180.25280 * 6 5 4 36 36 H 1.09010 * 109.46917 * 60.00269 * 9 8 7 37 37 H 1.08996 * 109.47367 * 299.99810 * 9 8 7 38 38 H 0.97000 * 120.00434 * 0.02562 * 12 10 9 39 39 H 1.09005 * 113.60943 * 25.41083 * 15 13 12 40 40 H 1.09000 * 113.66441 * 254.46530 * 15 13 12 41 41 H 1.08997 * 109.47344 * 154.13512 * 18 16 15 42 42 H 1.08998 * 109.47310 * 34.13538 * 18 16 15 43 43 H 1.07995 * 126.91362 * 0.02562 * 20 19 18 44 44 H 1.08000 * 126.75115 * 180.12638 * 21 20 19 45 45 H 1.09010 * 113.60995 * 139.94280 * 24 16 15 46 46 H 1.09002 * 113.61357 * 270.75438 * 24 16 15 47 47 H 1.07995 * 119.97350 * 180.02562 * 29 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 2.7263 -0.0373 -2.1396 6 6 3.1928 -0.6879 -3.2657 7 6 2.8537 -2.0143 -3.4894 8 8 3.3071 -2.6549 -4.5988 9 6 4.1237 -1.8997 -5.4958 10 6 4.5295 -2.7688 -6.6583 11 8 4.1557 -3.9212 -6.7133 12 7 5.3078 -2.2653 -7.6366 13 6 5.7018 -3.1099 -8.7669 14 1 5.6763 -4.1735 -8.5297 15 6 4.9864 -2.7544 -10.0830 16 6 6.3322 -2.9965 -10.7865 17 1 6.4797 -4.0290 -11.1033 18 6 6.6351 -1.9860 -11.8945 19 7 6.0195 -2.4343 -13.1461 20 6 5.1589 -1.7192 -13.9069 21 6 4.8444 -2.5067 -14.9619 22 7 5.5130 -3.6530 -14.7928 23 7 6.1998 -3.5783 -13.7078 24 6 7.0066 -2.6613 -9.4458 25 6 2.0557 -2.6875 -2.5755 26 7 1.6963 -4.1042 -2.8084 27 8 0.9961 -4.6947 -2.0056 28 8 2.1007 -4.6795 -3.8029 29 6 1.5965 -2.0342 -1.4484 30 1 -0.3933 0.4417 -0.7650 31 1 1.7924 -0.5138 0.8899 32 1 1.5614 2.4679 1.2086 33 1 3.5345 1.7704 -0.0322 34 1 2.9863 0.9967 -1.9673 35 1 3.8172 -0.1630 -3.9734 36 1 5.0153 -1.5544 -4.9722 37 1 3.5621 -1.0406 -5.8627 38 1 5.6071 -1.3437 -7.5924 39 1 4.6489 -1.7190 -10.1305 40 1 4.2113 -3.4667 -10.3659 41 1 7.7139 -1.9061 -12.0285 42 1 6.2302 -1.0123 -11.6189 43 1 4.7973 -0.7202 -13.7127 44 1 4.1809 -2.2598 -15.7775 45 1 7.8604 -3.2986 -9.2151 46 1 7.2238 -1.6006 -9.3195 47 1 0.9757 -2.5578 -0.7366 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14928172_4549638.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:34:34 Heat of formation + Delta-G solvation = 60.001993 kcal Electronic energy + Delta-G solvation = -34857.951717 eV Core-core repulsion = 29822.168767 eV Total energy + Delta-G solvation = -5035.782950 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.146 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -44.14453 -43.30217 -41.81189 -41.12377 -39.93800 -39.11660 -37.60579 -37.36636 -35.79909 -34.38941 -33.46764 -32.24132 -31.92958 -30.36816 -29.03062 -27.83409 -26.76979 -26.58606 -24.88989 -23.95660 -23.54365 -22.85704 -22.33247 -21.72417 -20.64769 -20.49344 -19.78195 -19.19587 -18.67694 -18.64713 -18.35208 -18.09603 -17.62099 -17.57288 -17.16223 -16.72864 -16.41742 -16.31637 -16.08545 -15.80901 -15.71483 -15.58188 -15.17113 -14.99564 -14.72370 -14.61961 -14.04777 -13.90812 -13.73869 -13.63071 -13.46161 -13.23285 -13.05147 -12.72211 -12.67339 -12.40685 -12.34353 -12.28582 -12.25247 -12.19786 -11.99678 -11.93844 -11.80536 -11.58149 -11.05551 -10.86261 -10.83659 -10.56256 -10.30456 -10.13569 -9.78622 -4.99220 -1.32603 -0.24176 0.14822 0.34992 0.71671 1.22013 1.27863 1.44106 1.56022 1.64633 1.65088 2.03014 2.05837 2.34031 3.12031 3.24669 3.33989 3.38904 3.40877 3.50428 3.53472 3.63472 3.71391 3.71892 3.74424 3.79887 3.93723 4.02384 4.04244 4.09752 4.29069 4.33221 4.35814 4.37214 4.42675 4.51267 4.62913 4.63548 4.68566 4.75908 4.83947 4.84312 4.96921 5.03684 5.07328 5.16605 5.18748 5.29846 5.51488 5.75260 5.77122 6.39743 6.47777 6.73561 7.18681 7.56614 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.084 4.084 3 Si 0.802 3.198 4 C -0.150 4.150 5 C -0.004 4.004 6 C -0.186 4.186 7 C 0.194 3.806 8 O -0.294 6.294 9 C 0.024 3.976 10 C 0.505 3.495 11 O -0.571 6.571 12 N -0.692 5.692 13 C 0.117 3.883 14 H 0.079 0.921 15 C -0.143 4.143 16 C -0.124 4.124 17 H 0.078 0.922 18 C 0.120 3.880 19 N -0.284 5.284 20 C -0.032 4.032 21 C -0.076 4.076 22 N -0.325 5.325 23 N -0.130 5.130 24 C -0.109 4.109 25 C -0.105 4.105 26 N 0.034 4.966 27 O -0.205 6.205 28 O -0.175 6.175 29 C -0.005 4.005 30 H 0.398 0.602 31 H 0.108 0.892 32 H -0.307 1.307 33 H -0.262 1.262 34 H 0.191 0.809 35 H 0.210 0.790 36 H 0.146 0.854 37 H 0.149 0.851 38 H 0.427 0.573 39 H 0.120 0.880 40 H 0.039 0.961 41 H 0.116 0.884 42 H 0.153 0.847 43 H 0.239 0.761 44 H 0.208 0.792 45 H 0.082 0.918 46 H 0.136 0.864 47 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.506 22.106 -0.178 22.782 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.192 4.192 3 Si 0.706 3.294 4 C -0.152 4.152 5 C -0.022 4.022 6 C -0.205 4.205 7 C 0.144 3.856 8 O -0.204 6.204 9 C -0.053 4.053 10 C 0.291 3.709 11 O -0.449 6.449 12 N -0.347 5.347 13 C 0.012 3.988 14 H 0.097 0.903 15 C -0.182 4.182 16 C -0.144 4.144 17 H 0.096 0.904 18 C 0.001 3.999 19 N -0.078 5.078 20 C -0.183 4.183 21 C -0.234 4.234 22 N -0.190 5.190 23 N -0.109 5.109 24 C -0.147 4.147 25 C -0.191 4.191 26 N 0.544 4.456 27 O -0.412 6.412 28 O -0.389 6.389 29 C -0.024 4.024 30 H 0.248 0.752 31 H 0.126 0.874 32 H -0.236 1.236 33 H -0.188 1.188 34 H 0.207 0.793 35 H 0.227 0.773 36 H 0.163 0.837 37 H 0.167 0.833 38 H 0.267 0.733 39 H 0.138 0.862 40 H 0.058 0.942 41 H 0.134 0.866 42 H 0.171 0.829 43 H 0.255 0.745 44 H 0.225 0.775 45 H 0.100 0.900 46 H 0.154 0.846 47 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 6.680 20.588 0.903 21.663 hybrid contribution -0.917 -0.954 0.165 1.333 sum 5.763 19.634 1.068 20.490 Atomic orbital electron populations 1.86531 1.17304 1.82231 1.50636 1.25516 0.85462 1.12241 0.96008 0.93807 0.77920 0.72301 0.85401 1.20464 1.02161 0.92599 0.99937 1.21745 0.89353 1.01231 0.89827 1.21838 1.05903 0.90356 1.02373 1.18978 0.89585 0.92125 0.84913 1.86478 1.63672 1.39910 1.30378 1.23174 0.98237 0.94516 0.89336 1.20652 0.78572 0.87614 0.84036 1.90865 1.55064 1.20627 1.78335 1.45536 1.51154 1.16591 1.21436 1.22390 0.96740 0.95624 0.84083 0.90273 1.23646 0.96127 1.03469 0.94924 1.22575 0.97942 0.99716 0.94149 0.90358 1.22610 1.00816 0.99654 0.76830 1.47861 1.29943 1.10418 1.19551 1.24422 0.97530 1.02806 0.93573 1.24243 1.05061 0.91153 1.02937 1.75086 1.09563 1.23941 1.10395 1.78226 1.21936 1.05242 1.05518 1.23302 0.95579 1.05037 0.90774 1.20887 1.13569 0.81406 1.03225 1.43938 0.98191 1.04088 0.99422 1.94505 1.36126 1.68415 1.42176 1.94680 1.56396 1.69454 1.18328 1.20833 0.94229 0.94861 0.92472 0.75188 0.87428 1.23567 1.18797 0.79278 0.77323 0.83694 0.83316 0.73330 0.86151 0.94209 0.86625 0.82881 0.74507 0.77512 0.89964 0.84623 0.83458 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 2.32 12.77 -148.98 -1.90 0.42 16 2 C -0.08 0.59 2.82 71.24 0.20 0.79 16 3 Si 0.80 -9.18 29.78 68.60 2.04 -7.14 16 4 C -0.15 1.01 5.39 -19.85 -0.11 0.91 16 5 C 0.00 0.06 8.66 22.26 0.19 0.25 16 6 C -0.19 2.42 9.04 22.37 0.20 2.62 16 7 C 0.19 -0.18 6.67 22.51 0.15 -0.03 16 8 O -0.29 -0.86 7.68 -63.40 -0.49 -1.35 16 9 C 0.02 -0.24 5.22 71.24 0.37 0.13 16 10 C 0.51 -0.70 7.91 87.66 0.69 -0.01 16 11 O -0.57 -8.07 16.10 16.01 0.26 -7.82 16 12 N -0.69 7.25 5.36 -439.76 -2.36 4.89 16 13 C 0.12 -0.71 4.24 45.58 0.19 -0.51 16 14 H 0.08 0.24 7.46 -2.39 -0.02 0.22 16 15 C -0.14 0.99 7.45 31.18 0.23 1.23 16 16 C -0.12 1.00 3.82 -10.27 -0.04 0.96 16 17 H 0.08 -0.02 7.94 -2.39 -0.02 -0.04 16 18 C 0.12 -1.40 6.28 86.38 0.54 -0.85 16 19 N -0.28 0.47 3.44 -347.74 -1.20 -0.73 16 20 C -0.03 0.16 11.57 83.49 0.97 1.12 16 21 C -0.08 -0.16 12.05 83.73 1.01 0.85 16 22 N -0.32 -3.76 12.41 -58.25 -0.72 -4.49 16 23 N -0.13 -1.17 12.78 37.02 0.47 -0.70 16 24 C -0.11 1.42 7.39 31.12 0.23 1.65 16 25 C -0.11 -0.66 6.87 36.48 0.25 -0.41 16 26 N 0.03 0.57 4.45 -46.24 -0.21 0.36 16 27 O -0.21 -3.88 18.45 18.89 0.35 -3.53 16 28 O -0.17 -3.80 17.24 25.61 0.44 -3.36 16 29 C 0.00 -0.01 9.12 22.25 0.20 0.20 16 30 H 0.40 -5.16 8.70 -74.06 -0.64 -5.81 16 31 H 0.11 -0.51 7.96 -2.39 -0.02 -0.53 16 32 H -0.31 0.41 7.11 99.48 0.71 1.12 16 33 H -0.26 2.55 7.11 99.48 0.71 3.25 16 34 H 0.19 -4.06 4.87 -2.91 -0.01 -4.07 16 35 H 0.21 -4.98 6.30 -2.91 -0.02 -5.00 16 36 H 0.15 -2.76 7.65 -2.38 -0.02 -2.78 16 37 H 0.15 -2.94 7.67 -2.39 -0.02 -2.95 16 38 H 0.43 -8.94 8.73 -92.71 -0.81 -9.75 16 39 H 0.12 -1.62 7.92 -2.38 -0.02 -1.64 16 40 H 0.04 0.05 8.14 -2.39 -0.02 0.03 16 41 H 0.12 -1.55 8.14 -2.39 -0.02 -1.57 16 42 H 0.15 -3.17 7.80 -2.39 -0.02 -3.19 16 43 H 0.24 -3.80 8.06 -2.91 -0.02 -3.83 16 44 H 0.21 -0.80 8.06 -2.91 -0.02 -0.82 16 45 H 0.08 -0.91 8.14 -2.38 -0.02 -0.93 16 46 H 0.14 -2.88 8.08 -2.39 -0.02 -2.90 16 47 H 0.15 0.56 7.61 -2.91 -0.02 0.53 16 Total: 0.00 -56.83 408.40 1.64 -55.20 By element: Atomic # 1 Polarization: -40.31 SS G_CDS: -0.35 Total: -40.66 kcal Atomic # 6 Polarization: 3.60 SS G_CDS: 5.29 Total: 8.89 kcal Atomic # 7 Polarization: 3.35 SS G_CDS: -4.01 Total: -0.66 kcal Atomic # 8 Polarization: -14.29 SS G_CDS: -1.34 Total: -15.63 kcal Atomic # 14 Polarization: -9.18 SS G_CDS: 2.04 Total: -7.14 kcal Total: -56.83 1.64 -55.20 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_4549638.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 115.198 kcal (2) G-P(sol) polarization free energy of solvation -56.832 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.366 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.636 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -55.196 kcal (6) G-S(sol) free energy of system = (1) + (5) 60.002 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds