Wall clock time and date at job start Sun Mar 7 2021 00:34:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86304 * 109.47061 * 2 1 4 4 C 1.50700 * 109.47024 * 240.00353 * 2 1 3 5 5 C 1.38269 * 119.94256 * 299.99944 * 4 2 1 6 6 C 1.38142 * 120.05826 * 180.02562 * 5 4 2 7 7 C 1.38728 * 119.94333 * 0.02562 * 6 5 4 8 8 O 1.35898 * 120.06210 * 180.02562 * 7 6 5 9 9 C 1.42893 * 117.00674 * 180.02562 * 8 7 6 10 10 F 1.39904 * 109.47205 * 59.99595 * 9 8 7 11 11 F 1.39900 * 109.46901 * 299.99634 * 9 8 7 12 12 C 1.50700 * 109.47216 * 180.02562 * 9 8 7 13 13 O 1.21277 * 120.00086 * 359.97438 * 12 9 8 14 14 N 1.34782 * 119.99820 * 179.97438 * 12 9 8 15 15 C 1.46498 * 119.99787 * 179.97438 * 14 12 9 16 16 H 1.09005 * 112.85157 * 336.19540 * 15 14 12 17 17 C 1.53780 * 113.61584 * 107.50206 * 15 14 12 18 18 C 1.53781 * 87.08042 * 139.97963 * 17 15 14 19 19 H 1.09002 * 113.69091 * 89.13026 * 18 17 15 20 20 C 1.53002 * 113.61708 * 220.02036 * 18 17 15 21 21 N 1.46502 * 109.46837 * 272.49849 * 20 18 17 22 22 C 1.35322 * 125.86299 * 124.71412 * 21 20 18 23 23 C 1.35351 * 106.16806 * 180.26356 * 22 21 20 24 24 N 1.33769 * 106.50107 * 0.02562 * 23 22 21 25 25 N 1.28629 * 108.88659 * 359.97438 * 24 23 22 26 26 C 1.53779 * 87.08242 * 334.56825 * 18 17 15 27 27 C 1.38740 * 119.88725 * 0.27421 * 7 6 5 28 28 C 1.38142 * 119.94350 * 359.42649 * 27 7 6 29 29 H 0.96702 * 114.00056 * 300.00600 * 1 2 3 30 30 H 1.08993 * 109.47149 * 119.99909 * 2 1 3 31 31 H 1.48496 * 110.00122 * 300.00008 * 3 2 1 32 32 H 1.48492 * 109.99960 * 61.32164 * 3 2 1 33 33 H 1.08003 * 119.96978 * 359.97438 * 5 4 2 34 34 H 1.07998 * 120.02924 * 180.02562 * 6 5 4 35 35 H 0.96998 * 119.99846 * 359.97438 * 14 12 9 36 36 H 1.09001 * 113.60990 * 25.43392 * 17 15 14 37 37 H 1.08999 * 113.61376 * 254.52906 * 17 15 14 38 38 H 1.08994 * 109.47592 * 152.49676 * 20 18 17 39 39 H 1.09002 * 109.46796 * 32.49479 * 20 18 17 40 40 H 1.07991 * 126.91601 * 0.22443 * 22 21 20 41 41 H 1.08004 * 126.74797 * 180.02562 * 23 22 21 42 42 H 1.09003 * 113.61215 * 139.98170 * 26 18 17 43 43 H 1.09001 * 113.61852 * 270.79589 * 26 18 17 44 44 H 1.07998 * 120.02445 * 179.72524 * 27 7 6 45 45 H 1.08002 * 119.97206 * 180.27657 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.5966 -2.0341 -1.4482 6 6 2.0561 -2.6877 -2.5751 7 6 2.8546 -2.0150 -3.4885 8 8 3.3076 -2.6555 -4.5982 9 6 4.1254 -1.9008 -5.4946 10 9 5.2699 -1.4591 -4.8220 11 9 3.4059 -0.7971 -5.9651 12 6 4.5296 -2.7694 -6.6579 13 8 4.1546 -3.9214 -6.7136 14 7 5.3078 -2.2659 -7.6364 15 6 5.7011 -3.1104 -8.7670 16 1 5.6754 -4.1740 -8.5300 17 6 4.9866 -2.7527 -10.0810 18 6 6.3309 -2.9968 -10.7868 19 1 6.4780 -4.0292 -11.1039 20 6 6.6339 -1.9860 -11.8947 21 7 6.0486 -2.4522 -13.1543 22 6 5.1879 -1.7572 -13.9337 23 6 4.9005 -2.5590 -14.9856 24 7 5.5898 -3.6904 -14.8004 25 7 6.2601 -3.5954 -13.7067 26 6 7.0059 -2.6620 -9.4462 27 6 3.1943 -0.6885 -3.2647 28 6 2.7270 -0.0376 -2.1393 29 1 -0.3933 0.4418 0.7650 30 1 1.7923 -0.5138 0.8899 31 1 1.5615 2.4679 -1.2084 32 1 1.5879 2.4585 1.2242 33 1 0.9759 -2.5578 -0.7362 34 1 1.7940 -3.7216 -2.7449 35 1 5.6073 -1.3444 -7.5920 36 1 4.6508 -1.7168 -10.1274 37 1 4.2099 -3.4636 -10.3631 38 1 7.7130 -1.8863 -12.0105 39 1 6.2058 -1.0189 -11.6312 40 1 4.8066 -0.7633 -13.7525 41 1 4.2438 -2.3303 -15.8120 42 1 7.8595 -3.2996 -9.2160 43 1 7.2236 -1.6015 -9.3197 44 1 3.8194 -0.1640 -3.9720 45 1 2.9875 0.9963 -1.9669 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14928172_4549640.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:34:40 Heat of formation + Delta-G solvation = -29.348723 kcal Electronic energy + Delta-G solvation = -34133.677996 eV Core-core repulsion = 28986.128993 eV Total energy + Delta-G solvation = -5147.549003 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.133 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -50.84310 -48.81894 -44.18865 -41.67230 -41.25074 -40.01691 -39.10738 -37.43343 -36.06833 -34.65335 -32.46892 -32.05189 -31.97479 -30.13657 -28.79715 -27.17988 -26.37274 -25.10204 -24.23712 -23.63561 -22.81336 -22.38741 -22.17557 -21.18900 -20.48675 -19.71557 -19.62727 -18.80650 -18.58567 -18.11400 -17.80032 -17.22415 -17.01305 -16.79641 -16.53323 -16.36819 -16.28505 -15.89415 -15.75346 -15.54670 -15.43107 -15.29788 -15.16545 -15.06327 -14.90051 -14.83666 -14.40170 -14.27503 -14.05722 -14.01036 -13.90094 -13.67309 -13.42973 -13.06160 -12.84585 -12.59696 -12.52348 -12.29240 -12.11425 -11.93387 -11.84021 -11.81870 -11.51804 -11.02473 -10.61947 -10.58040 -10.33701 -10.12377 -9.49178 -5.03278 0.09119 0.21688 0.46986 0.63271 0.65716 1.20964 1.28742 1.53177 1.67483 1.73917 1.89509 1.99926 2.47853 2.68091 2.93841 2.99568 3.16862 3.22463 3.26418 3.34982 3.50030 3.58577 3.63980 3.68689 3.72562 3.81662 3.97500 4.09707 4.12038 4.20112 4.21075 4.28114 4.30331 4.31324 4.33737 4.50262 4.51764 4.62883 4.65654 4.77748 4.84299 4.95978 5.04314 5.09840 5.22061 5.40338 5.42565 5.56071 5.70912 5.89659 6.34624 6.37302 7.57301 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.073 4.073 3 Si 0.679 3.321 4 C -0.095 4.095 5 C -0.054 4.054 6 C -0.126 4.126 7 C 0.105 3.895 8 O -0.286 6.286 9 C 0.431 3.569 10 F -0.174 7.174 11 F -0.175 7.175 12 C 0.518 3.482 13 O -0.465 6.465 14 N -0.695 5.695 15 C 0.124 3.876 16 H 0.128 0.872 17 C -0.149 4.149 18 C -0.124 4.124 19 H 0.117 0.883 20 C 0.127 3.873 21 N -0.290 5.290 22 C -0.051 4.051 23 C -0.051 4.051 24 N -0.270 5.270 25 N -0.084 5.084 26 C -0.133 4.133 27 C -0.186 4.186 28 C -0.075 4.075 29 H 0.381 0.619 30 H 0.079 0.921 31 H -0.254 1.254 32 H -0.259 1.259 33 H 0.139 0.861 34 H 0.141 0.859 35 H 0.410 0.590 36 H 0.092 0.908 37 H 0.081 0.919 38 H 0.105 0.895 39 H 0.108 0.892 40 H 0.190 0.810 41 H 0.190 0.810 42 H 0.091 0.909 43 H 0.096 0.904 44 H 0.137 0.863 45 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.663 6.707 2.663 8.093 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.183 4.183 3 Si 0.580 3.420 4 C -0.095 4.095 5 C -0.073 4.073 6 C -0.144 4.144 7 C 0.063 3.937 8 O -0.202 6.202 9 C 0.353 3.647 10 F -0.155 7.155 11 F -0.157 7.157 12 C 0.295 3.705 13 O -0.335 6.335 14 N -0.349 5.349 15 C 0.020 3.980 16 H 0.145 0.855 17 C -0.188 4.188 18 C -0.143 4.143 19 H 0.135 0.865 20 C 0.006 3.994 21 N -0.084 5.084 22 C -0.202 4.202 23 C -0.208 4.208 24 N -0.136 5.136 25 N -0.064 5.064 26 C -0.171 4.171 27 C -0.204 4.204 28 C -0.093 4.093 29 H 0.229 0.771 30 H 0.097 0.903 31 H -0.179 1.179 32 H -0.184 1.184 33 H 0.156 0.844 34 H 0.159 0.841 35 H 0.246 0.754 36 H 0.111 0.889 37 H 0.100 0.900 38 H 0.123 0.877 39 H 0.126 0.874 40 H 0.207 0.793 41 H 0.207 0.793 42 H 0.110 0.890 43 H 0.115 0.885 44 H 0.154 0.846 45 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 3.997 4.873 2.140 6.656 hybrid contribution -1.512 1.979 0.598 2.561 sum 2.485 6.852 2.738 7.786 Atomic orbital electron populations 1.86588 1.17721 1.80159 1.49857 1.24746 0.84528 1.10891 0.98104 0.95142 0.91695 0.74685 0.80497 1.19275 0.99564 0.94545 0.96161 1.20868 0.96805 0.93583 0.95995 1.20515 0.99134 1.01277 0.93496 1.18964 0.96574 0.91778 0.86432 1.86667 1.63396 1.38351 1.31809 1.21824 0.76827 0.79429 0.86573 1.93195 1.50838 1.89920 1.81580 1.93195 1.78302 1.55604 1.88553 1.19377 0.80948 0.87640 0.82496 1.90885 1.51440 1.15778 1.75388 1.45794 1.50616 1.16431 1.22022 1.22726 0.95336 0.96986 0.82909 0.85453 1.23643 0.97206 1.03276 0.94641 1.22740 0.97517 1.01222 0.92836 0.86470 1.22164 1.00504 0.98154 0.78625 1.47488 1.30592 1.11863 1.18453 1.23722 0.99570 1.02013 0.94905 1.23692 1.04338 0.91522 1.01217 1.75168 1.07897 1.21803 1.08761 1.78303 1.20446 1.02602 1.05023 1.23385 0.97266 1.03224 0.93255 1.21423 1.04717 0.93563 1.00718 1.20725 0.96532 0.99290 0.92705 0.77119 0.90304 1.17886 1.18436 0.84351 0.84092 0.75350 0.88915 0.90008 0.87667 0.87356 0.79296 0.79292 0.89007 0.88509 0.84577 0.84790 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.44 12.74 -35.23 -0.45 -0.89 16 2 C -0.07 0.03 2.81 36.01 0.10 0.13 16 3 Si 0.68 -0.81 29.78 -169.99 -5.06 -5.87 16 4 C -0.10 -0.11 5.42 -104.60 -0.57 -0.68 16 5 C -0.05 -0.07 9.60 -39.61 -0.38 -0.45 16 6 C -0.13 -0.24 9.99 -39.44 -0.39 -0.63 16 7 C 0.11 0.29 6.48 -39.21 -0.25 0.04 16 8 O -0.29 -0.98 9.60 -39.33 -0.38 -1.36 16 9 C 0.43 0.49 2.05 36.01 0.07 0.57 16 10 F -0.17 -0.04 15.28 2.25 0.03 0.00 16 11 F -0.18 -0.11 15.31 2.25 0.03 -0.07 16 12 C 0.52 0.48 7.34 -10.98 -0.08 0.40 16 13 O -0.47 -2.10 16.10 -14.35 -0.23 -2.34 16 14 N -0.70 1.99 5.35 -53.02 -0.28 1.71 16 15 C 0.12 -0.41 4.24 -67.12 -0.28 -0.70 16 16 H 0.13 -0.21 7.47 -51.93 -0.39 -0.60 16 17 C -0.15 0.54 7.43 -25.92 -0.19 0.35 16 18 C -0.12 0.53 3.84 -89.81 -0.34 0.18 16 19 H 0.12 -0.27 7.91 -51.93 -0.41 -0.68 16 20 C 0.13 -0.59 6.29 -4.04 -0.03 -0.61 16 21 N -0.29 0.17 3.44 -61.26 -0.21 -0.04 16 22 C -0.05 0.08 11.57 -17.04 -0.20 -0.12 16 23 C -0.05 -0.04 12.05 -17.74 -0.21 -0.26 16 24 N -0.27 -1.24 12.41 30.24 0.38 -0.86 16 25 N -0.08 -0.28 12.76 60.35 0.77 0.49 16 26 C -0.13 0.76 7.39 -25.92 -0.19 0.57 16 27 C -0.19 -0.30 8.26 -39.43 -0.33 -0.63 16 28 C -0.07 -0.06 8.66 -39.61 -0.34 -0.40 16 29 H 0.38 -1.20 8.74 45.56 0.40 -0.80 16 30 H 0.08 -0.17 7.96 -51.93 -0.41 -0.59 16 31 H -0.25 -0.51 7.11 56.52 0.40 -0.10 16 32 H -0.26 -0.20 7.11 56.52 0.40 0.21 16 33 H 0.14 -0.02 8.06 -52.48 -0.42 -0.44 16 34 H 0.14 0.09 8.06 -52.49 -0.42 -0.33 16 35 H 0.41 -2.30 8.73 -40.82 -0.36 -2.65 16 36 H 0.09 -0.45 7.90 -51.93 -0.41 -0.86 16 37 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 38 H 0.11 -0.58 8.14 -51.93 -0.42 -1.00 16 39 H 0.11 -0.80 7.77 -51.93 -0.40 -1.20 16 40 H 0.19 -1.03 8.06 -52.49 -0.42 -1.46 16 41 H 0.19 -0.38 8.06 -52.48 -0.42 -0.80 16 42 H 0.09 -0.51 8.14 -51.93 -0.42 -0.94 16 43 H 0.10 -0.74 8.08 -51.93 -0.42 -1.16 16 44 H 0.14 0.06 5.10 -52.49 -0.27 -0.21 16 45 H 0.13 -0.18 4.87 -52.49 -0.26 -0.44 16 LS Contribution 391.60 15.07 5.90 5.90 Total: 0.00 -11.98 391.60 -8.20 -20.18 By element: Atomic # 1 Polarization: -9.52 SS G_CDS: -5.08 Total: -14.60 kcal Atomic # 6 Polarization: 1.38 SS G_CDS: -3.62 Total: -2.24 kcal Atomic # 7 Polarization: 0.64 SS G_CDS: 0.65 Total: 1.29 kcal Atomic # 8 Polarization: -3.53 SS G_CDS: -1.06 Total: -4.59 kcal Atomic # 9 Polarization: -0.14 SS G_CDS: 0.07 Total: -0.07 kcal Atomic # 14 Polarization: -0.81 SS G_CDS: -5.06 Total: -5.87 kcal Total LS contribution 5.90 Total: 5.90 kcal Total: -11.98 -8.20 -20.18 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_4549640.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.169 kcal (2) G-P(sol) polarization free energy of solvation -11.977 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.146 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.203 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.180 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.349 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds