Wall clock time and date at job start Sun Mar 7 2021 00:34:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86304 * 109.47061 * 2 1 4 4 C 1.50700 * 109.47024 * 240.00353 * 2 1 3 5 5 C 1.38269 * 119.94256 * 299.99944 * 4 2 1 6 6 C 1.38142 * 120.05826 * 180.02562 * 5 4 2 7 7 C 1.38728 * 119.94333 * 0.02562 * 6 5 4 8 8 O 1.35898 * 120.06210 * 180.02562 * 7 6 5 9 9 C 1.42893 * 117.00674 * 180.02562 * 8 7 6 10 10 F 1.39904 * 109.47205 * 59.99595 * 9 8 7 11 11 F 1.39900 * 109.46901 * 299.99634 * 9 8 7 12 12 C 1.50700 * 109.47216 * 180.02562 * 9 8 7 13 13 O 1.21277 * 120.00086 * 359.97438 * 12 9 8 14 14 N 1.34782 * 119.99820 * 179.97438 * 12 9 8 15 15 C 1.46498 * 119.99787 * 179.97438 * 14 12 9 16 16 H 1.09005 * 112.85157 * 336.19540 * 15 14 12 17 17 C 1.53780 * 113.61584 * 107.50206 * 15 14 12 18 18 C 1.53781 * 87.08042 * 139.97963 * 17 15 14 19 19 H 1.09002 * 113.69091 * 89.13026 * 18 17 15 20 20 C 1.53002 * 113.61708 * 220.02036 * 18 17 15 21 21 N 1.46502 * 109.46837 * 272.49849 * 20 18 17 22 22 C 1.35322 * 125.86299 * 124.71412 * 21 20 18 23 23 C 1.35351 * 106.16806 * 180.26356 * 22 21 20 24 24 N 1.33769 * 106.50107 * 0.02562 * 23 22 21 25 25 N 1.28629 * 108.88659 * 359.97438 * 24 23 22 26 26 C 1.53779 * 87.08242 * 334.56825 * 18 17 15 27 27 C 1.38740 * 119.88725 * 0.27421 * 7 6 5 28 28 C 1.38142 * 119.94350 * 359.42649 * 27 7 6 29 29 H 0.96702 * 114.00056 * 300.00600 * 1 2 3 30 30 H 1.08993 * 109.47149 * 119.99909 * 2 1 3 31 31 H 1.48496 * 110.00122 * 300.00008 * 3 2 1 32 32 H 1.48492 * 109.99960 * 61.32164 * 3 2 1 33 33 H 1.08003 * 119.96978 * 359.97438 * 5 4 2 34 34 H 1.07998 * 120.02924 * 180.02562 * 6 5 4 35 35 H 0.96998 * 119.99846 * 359.97438 * 14 12 9 36 36 H 1.09001 * 113.60990 * 25.43392 * 17 15 14 37 37 H 1.08999 * 113.61376 * 254.52906 * 17 15 14 38 38 H 1.08994 * 109.47592 * 152.49676 * 20 18 17 39 39 H 1.09002 * 109.46796 * 32.49479 * 20 18 17 40 40 H 1.07991 * 126.91601 * 0.22443 * 22 21 20 41 41 H 1.08004 * 126.74797 * 180.02562 * 23 22 21 42 42 H 1.09003 * 113.61215 * 139.98170 * 26 18 17 43 43 H 1.09001 * 113.61852 * 270.79589 * 26 18 17 44 44 H 1.07998 * 120.02445 * 179.72524 * 27 7 6 45 45 H 1.08002 * 119.97206 * 180.27657 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.5966 -2.0341 -1.4482 6 6 2.0561 -2.6877 -2.5751 7 6 2.8546 -2.0150 -3.4885 8 8 3.3076 -2.6555 -4.5982 9 6 4.1254 -1.9008 -5.4946 10 9 5.2699 -1.4591 -4.8220 11 9 3.4059 -0.7971 -5.9651 12 6 4.5296 -2.7694 -6.6579 13 8 4.1546 -3.9214 -6.7136 14 7 5.3078 -2.2659 -7.6364 15 6 5.7011 -3.1104 -8.7670 16 1 5.6754 -4.1740 -8.5300 17 6 4.9866 -2.7527 -10.0810 18 6 6.3309 -2.9968 -10.7868 19 1 6.4780 -4.0292 -11.1039 20 6 6.6339 -1.9860 -11.8947 21 7 6.0486 -2.4522 -13.1543 22 6 5.1879 -1.7572 -13.9337 23 6 4.9005 -2.5590 -14.9856 24 7 5.5898 -3.6904 -14.8004 25 7 6.2601 -3.5954 -13.7067 26 6 7.0059 -2.6620 -9.4462 27 6 3.1943 -0.6885 -3.2647 28 6 2.7270 -0.0376 -2.1393 29 1 -0.3933 0.4418 0.7650 30 1 1.7923 -0.5138 0.8899 31 1 1.5615 2.4679 -1.2084 32 1 1.5879 2.4585 1.2242 33 1 0.9759 -2.5578 -0.7362 34 1 1.7940 -3.7216 -2.7449 35 1 5.6073 -1.3444 -7.5920 36 1 4.6508 -1.7168 -10.1274 37 1 4.2099 -3.4636 -10.3631 38 1 7.7130 -1.8863 -12.0105 39 1 6.2058 -1.0189 -11.6312 40 1 4.8066 -0.7633 -13.7525 41 1 4.2438 -2.3303 -15.8120 42 1 7.8595 -3.2996 -9.2160 43 1 7.2236 -1.6015 -9.3197 44 1 3.8194 -0.1640 -3.9720 45 1 2.9875 0.9963 -1.9669 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14928172_4549640.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:34:39 Heat of formation + Delta-G solvation = -32.530696 kcal Electronic energy + Delta-G solvation = -34133.815977 eV Core-core repulsion = 28986.128993 eV Total energy + Delta-G solvation = -5147.686984 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.133 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -50.90068 -48.86694 -44.15251 -41.61894 -41.30310 -39.92657 -39.16136 -37.44867 -35.98227 -34.59514 -32.52753 -32.11057 -31.93579 -30.02272 -28.75316 -26.83642 -26.37405 -25.04826 -24.24311 -23.58087 -22.81630 -22.41588 -22.09876 -21.01056 -20.50865 -19.70878 -19.64853 -18.65734 -18.55622 -18.13770 -17.69932 -17.23239 -17.02548 -16.58739 -16.50236 -16.37261 -16.26557 -15.83512 -15.76269 -15.58427 -15.47057 -15.36876 -15.11720 -15.02120 -14.92713 -14.66022 -14.45393 -14.33811 -14.03531 -13.75499 -13.71888 -13.52673 -13.19149 -13.13896 -12.73363 -12.57859 -12.48359 -12.13417 -12.05782 -11.87592 -11.82888 -11.66936 -11.55154 -10.93110 -10.53966 -10.49189 -10.30742 -10.19559 -9.57779 -4.94151 0.00418 0.14583 0.45213 0.60029 0.70939 1.28104 1.53203 1.59031 1.64365 1.65789 1.93973 1.99619 2.41769 2.76286 3.19957 3.25957 3.31946 3.34081 3.48938 3.54487 3.62026 3.65568 3.69951 3.82909 3.97556 4.05212 4.08019 4.18464 4.30125 4.33324 4.36523 4.40415 4.49679 4.51335 4.63180 4.67710 4.77102 4.80026 4.81290 4.89640 4.96155 5.01515 5.02649 5.27911 5.32868 5.34799 5.38356 5.73466 5.80376 5.85291 6.46241 6.58297 7.55767 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.082 4.082 3 Si 0.759 3.241 4 C -0.104 4.104 5 C -0.060 4.060 6 C -0.137 4.137 7 C 0.085 3.915 8 O -0.307 6.307 9 C 0.434 3.566 10 F -0.168 7.168 11 F -0.171 7.171 12 C 0.516 3.484 13 O -0.512 6.512 14 N -0.671 5.671 15 C 0.113 3.887 16 H 0.102 0.898 17 C -0.145 4.145 18 C -0.120 4.120 19 H 0.089 0.911 20 C 0.118 3.882 21 N -0.284 5.284 22 C -0.034 4.034 23 C -0.075 4.075 24 N -0.323 5.323 25 N -0.126 5.126 26 C -0.111 4.111 27 C -0.191 4.191 28 C -0.079 4.079 29 H 0.396 0.604 30 H 0.101 0.899 31 H -0.298 1.298 32 H -0.284 1.284 33 H 0.150 0.850 34 H 0.145 0.855 35 H 0.427 0.573 36 H 0.116 0.884 37 H 0.053 0.947 38 H 0.118 0.882 39 H 0.149 0.851 40 H 0.235 0.765 41 H 0.208 0.792 42 H 0.093 0.907 43 H 0.131 0.869 44 H 0.146 0.854 45 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.439 9.559 3.446 11.089 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.368 6.368 2 C -0.191 4.191 3 Si 0.664 3.336 4 C -0.105 4.105 5 C -0.078 4.078 6 C -0.156 4.156 7 C 0.042 3.958 8 O -0.224 6.224 9 C 0.356 3.644 10 F -0.149 7.149 11 F -0.153 7.153 12 C 0.294 3.706 13 O -0.385 6.385 14 N -0.324 5.324 15 C 0.009 3.991 16 H 0.121 0.879 17 C -0.184 4.184 18 C -0.140 4.140 19 H 0.107 0.893 20 C -0.001 4.001 21 N -0.078 5.078 22 C -0.185 4.185 23 C -0.232 4.232 24 N -0.188 5.188 25 N -0.105 5.105 26 C -0.149 4.149 27 C -0.209 4.209 28 C -0.096 4.096 29 H 0.247 0.753 30 H 0.119 0.881 31 H -0.226 1.226 32 H -0.211 1.211 33 H 0.167 0.833 34 H 0.163 0.837 35 H 0.267 0.733 36 H 0.135 0.865 37 H 0.072 0.928 38 H 0.136 0.864 39 H 0.167 0.833 40 H 0.252 0.748 41 H 0.224 0.776 42 H 0.111 0.889 43 H 0.149 0.851 44 H 0.163 0.837 45 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 4.823 7.731 2.937 9.573 hybrid contribution -1.808 1.176 0.374 2.189 sum 3.014 8.907 3.312 9.970 Atomic orbital electron populations 1.86541 1.18413 1.80698 1.51180 1.24958 0.84145 1.11729 0.98246 0.94246 0.90378 0.72267 0.76660 1.19568 0.99432 0.94660 0.96813 1.21057 0.96837 0.93916 0.95962 1.20698 0.99339 1.01702 0.93830 1.19216 0.97403 0.92497 0.86672 1.86643 1.63960 1.39421 1.32338 1.21788 0.76773 0.79444 0.86367 1.93201 1.50387 1.89819 1.81491 1.93196 1.78290 1.55335 1.88460 1.19490 0.81078 0.87067 0.82922 1.90866 1.53595 1.17622 1.76457 1.45741 1.48729 1.17179 1.20797 1.22805 0.97522 0.95986 0.82771 0.87949 1.23658 0.96750 1.03821 0.94133 1.22569 0.97399 1.00175 0.93826 0.89305 1.22607 1.01602 0.99269 0.76614 1.47839 1.29965 1.10874 1.19103 1.24397 0.97805 1.02955 0.93353 1.24220 1.04843 0.91237 1.02946 1.75085 1.09596 1.24139 1.10004 1.78213 1.21927 1.04802 1.05598 1.23353 0.95564 1.05196 0.90809 1.21586 1.04869 0.93229 1.01243 1.20982 0.96215 1.00127 0.92310 0.75307 0.88085 1.22578 1.21059 0.83254 0.83726 0.73346 0.86542 0.92829 0.86385 0.83311 0.74821 0.77551 0.88869 0.85102 0.83651 0.82921 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.60 12.74 -148.98 -1.90 -2.50 16 2 C -0.08 0.14 2.81 71.24 0.20 0.34 16 3 Si 0.76 -2.40 29.78 68.60 2.04 -0.36 16 4 C -0.10 -0.21 5.42 -19.85 -0.11 -0.32 16 5 C -0.06 -0.17 9.60 22.25 0.21 0.04 16 6 C -0.14 -0.68 9.99 22.36 0.22 -0.46 16 7 C 0.08 0.56 6.48 22.51 0.15 0.71 16 8 O -0.31 -2.57 9.60 -73.37 -0.70 -3.27 16 9 C 0.43 1.23 2.05 71.24 0.15 1.38 16 10 F -0.17 -0.04 15.28 44.97 0.69 0.64 16 11 F -0.17 -0.19 15.31 44.97 0.69 0.50 16 12 C 0.52 1.43 7.34 87.66 0.64 2.07 16 13 O -0.51 -5.81 16.10 16.02 0.26 -5.56 16 14 N -0.67 4.19 5.35 -440.03 -2.36 1.83 16 15 C 0.11 -0.73 4.24 45.52 0.19 -0.54 16 16 H 0.10 -0.10 7.47 -2.38 -0.02 -0.12 16 17 C -0.15 1.09 7.43 31.12 0.23 1.32 16 18 C -0.12 1.08 3.84 -10.27 -0.04 1.04 16 19 H 0.09 -0.24 7.91 -2.39 -0.02 -0.26 16 20 C 0.12 -1.35 6.29 86.38 0.54 -0.81 16 21 N -0.28 0.51 3.44 -347.73 -1.20 -0.68 16 22 C -0.03 0.15 11.57 83.49 0.97 1.12 16 23 C -0.07 -0.15 12.05 83.73 1.01 0.86 16 24 N -0.32 -3.55 12.41 -58.25 -0.72 -4.28 16 25 N -0.13 -1.04 12.76 37.02 0.47 -0.56 16 26 C -0.11 1.46 7.39 31.12 0.23 1.69 16 27 C -0.19 -0.65 8.26 22.37 0.18 -0.47 16 28 C -0.08 -0.10 8.66 22.25 0.19 0.09 16 29 H 0.40 -2.76 8.74 -74.06 -0.65 -3.41 16 30 H 0.10 -0.62 7.96 -2.39 -0.02 -0.64 16 31 H -0.30 -1.25 7.11 99.48 0.71 -0.54 16 32 H -0.28 -0.24 7.11 99.48 0.71 0.47 16 33 H 0.15 -0.03 8.06 -2.91 -0.02 -0.05 16 34 H 0.14 0.44 8.06 -2.91 -0.02 0.41 16 35 H 0.43 -5.64 8.73 -92.71 -0.81 -6.45 16 36 H 0.12 -1.43 7.90 -2.39 -0.02 -1.45 16 37 H 0.05 -0.07 8.14 -2.39 -0.02 -0.09 16 38 H 0.12 -1.58 8.14 -2.39 -0.02 -1.60 16 39 H 0.15 -2.89 7.77 -2.39 -0.02 -2.91 16 40 H 0.24 -3.49 8.06 -2.92 -0.02 -3.51 16 41 H 0.21 -0.77 8.06 -2.91 -0.02 -0.80 16 42 H 0.09 -1.15 8.14 -2.39 -0.02 -1.17 16 43 H 0.13 -2.55 8.08 -2.39 -0.02 -2.57 16 44 H 0.15 0.08 5.10 -2.91 -0.01 0.07 16 45 H 0.15 -0.54 4.87 -2.91 -0.01 -0.55 16 Total: 0.00 -33.25 391.60 1.91 -31.34 By element: Atomic # 1 Polarization: -24.84 SS G_CDS: -0.34 Total: -25.17 kcal Atomic # 6 Polarization: 3.08 SS G_CDS: 4.98 Total: 8.05 kcal Atomic # 7 Polarization: 0.11 SS G_CDS: -3.80 Total: -3.69 kcal Atomic # 8 Polarization: -8.98 SS G_CDS: -2.34 Total: -11.32 kcal Atomic # 9 Polarization: -0.23 SS G_CDS: 1.38 Total: 1.14 kcal Atomic # 14 Polarization: -2.40 SS G_CDS: 2.04 Total: -0.36 kcal Total: -33.25 1.91 -31.34 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_4549640.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.186 kcal (2) G-P(sol) polarization free energy of solvation -33.255 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.441 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.910 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.344 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.531 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds