Wall clock time and date at job start Sun Mar 7 2021 00:35:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.46971 * 2 1 4 4 C 1.50698 * 109.47012 * 239.99996 * 2 1 3 5 5 C 1.34235 * 126.50224 * 105.35590 * 4 2 1 6 6 N 1.36838 * 109.93918 * 180.13135 * 5 4 2 7 7 C 1.46492 * 125.06423 * 179.81586 * 6 5 4 8 8 C 1.50706 * 109.47193 * 264.69958 * 7 6 5 9 9 O 1.21281 * 119.99922 * 359.97438 * 8 7 6 10 10 N 1.34779 * 119.99749 * 179.97438 * 8 7 6 11 11 C 1.46494 * 119.99525 * 179.97438 * 10 8 7 12 12 H 1.09000 * 112.91148 * 23.75262 * 11 10 8 13 13 C 1.53786 * 113.61370 * 155.00031 * 11 10 8 14 14 C 1.53781 * 87.17350 * 140.02367 * 13 11 10 15 15 H 1.08999 * 113.61567 * 89.07405 * 14 13 11 16 16 C 1.52991 * 113.61529 * 219.97788 * 14 13 11 17 17 N 1.46508 * 109.47429 * 184.99923 * 16 14 13 18 18 C 1.35305 * 125.86550 * 124.71309 * 17 16 14 19 19 C 1.35348 * 106.17263 * 179.90742 * 18 17 16 20 20 N 1.33771 * 106.49864 * 0.35374 * 19 18 17 21 21 N 1.28635 * 108.88237 * 359.77438 * 20 19 18 22 22 C 1.53781 * 87.08070 * 334.52830 * 14 13 11 23 23 C 1.37692 * 109.87203 * 359.55222 * 6 5 4 24 24 C 1.39087 * 133.51445 * 180.27769 * 23 6 5 25 25 C 1.37789 * 119.78046 * 179.97438 * 24 23 6 26 26 C 1.38788 * 120.66586 * 0.03335 * 25 24 23 27 27 C 1.36665 * 120.52786 * 359.94908 * 26 25 24 28 28 C 1.39593 * 119.76384 * 0.04613 * 27 26 25 29 29 H 0.96697 * 114.00363 * 300.00261 * 1 2 3 30 30 H 1.08995 * 109.47098 * 119.99772 * 2 1 3 31 31 H 1.48504 * 109.99849 * 299.99724 * 3 2 1 32 32 H 1.48493 * 110.00099 * 61.31984 * 3 2 1 33 33 H 1.07995 * 125.03356 * 359.97111 * 5 4 2 34 34 H 1.09001 * 109.47376 * 144.70113 * 7 6 5 35 35 H 1.09005 * 109.47196 * 24.69900 * 7 6 5 36 36 H 0.97000 * 119.99938 * 359.97438 * 10 8 7 37 37 H 1.09002 * 113.61357 * 25.43283 * 13 11 10 38 38 H 1.09002 * 113.61608 * 254.61445 * 13 11 10 39 39 H 1.08997 * 109.47550 * 304.99814 * 16 14 13 40 40 H 1.09002 * 109.47334 * 65.00084 * 16 14 13 41 41 H 1.08002 * 126.91630 * 0.02562 * 18 17 16 42 42 H 1.08001 * 126.75416 * 180.12537 * 19 18 17 43 43 H 1.09005 * 113.61471 * 139.98321 * 22 14 13 44 44 H 1.08996 * 113.61178 * 270.79663 * 22 14 13 45 45 H 1.08001 * 120.11060 * 0.02562 * 24 23 6 46 46 H 1.07994 * 119.66712 * 180.02562 * 25 24 23 47 47 H 1.07997 * 119.73982 * 179.97438 * 26 25 24 48 48 H 1.08002 * 120.11624 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.4669 -0.1381 -2.3202 6 7 2.8040 -1.0992 -3.2341 7 6 3.4095 -0.8407 -4.5427 8 6 2.3304 -0.7841 -5.5932 9 8 1.1699 -0.9445 -5.2797 10 7 2.6552 -0.5553 -6.8811 11 6 1.6063 -0.5009 -7.9024 12 1 0.6283 -0.2477 -7.4931 13 6 1.9914 0.3308 -9.1372 14 6 1.2977 -0.7480 -9.9857 15 1 0.2355 -0.5622 -10.1449 16 6 2.0437 -1.0846 -11.2783 17 7 1.2492 -2.0278 -12.0693 18 6 0.8555 -1.8521 -13.3518 19 6 0.1511 -2.9588 -13.6850 20 7 0.1417 -3.7436 -12.6017 21 7 0.8009 -3.1634 -11.6617 22 6 1.5861 -1.7267 -8.8352 23 6 2.4946 -2.3458 -2.7380 24 6 2.6301 -3.6364 -3.2386 25 6 2.2162 -4.7109 -2.4818 26 6 1.6637 -4.5194 -1.2231 27 6 1.5217 -3.2600 -0.7117 28 6 1.9344 -2.1570 -1.4612 29 1 -0.3934 0.4417 0.7650 30 1 1.7923 -0.5138 0.8900 31 1 1.5615 2.4679 -1.2086 32 1 1.5879 2.4585 1.2242 33 1 2.6082 0.9238 -2.4567 34 1 4.1095 -1.6407 -4.7836 35 1 3.9406 0.1109 -4.5157 36 1 3.5834 -0.4267 -7.1318 37 1 3.0668 0.3928 -9.3039 38 1 1.4997 1.3027 -9.1797 39 1 2.2037 -0.1728 -11.8536 40 1 3.0063 -1.5347 -11.0356 41 1 1.0633 -1.0010 -13.9833 42 1 -0.3151 -3.1658 -14.6369 43 1 0.7666 -2.4163 -8.6327 44 1 2.5501 -2.2283 -8.9200 45 1 3.0590 -3.7958 -4.2169 46 1 2.3225 -5.7122 -2.8722 47 1 1.3439 -5.3723 -0.6430 48 1 1.0913 -3.1187 0.2688 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14928172_9818708.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:35:47 Heat of formation + Delta-G solvation = 140.963748 kcal Electronic energy + Delta-G solvation = -32093.284350 eV Core-core repulsion = 27733.294982 eV Total energy + Delta-G solvation = -4359.989368 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.164 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -44.17260 -42.44192 -41.25642 -39.67131 -37.94199 -37.57305 -35.88067 -34.50695 -33.97327 -31.95409 -31.37538 -30.14368 -29.86446 -28.77447 -27.00605 -25.88251 -24.66293 -23.61560 -23.51145 -22.72260 -22.18769 -21.72025 -20.99565 -20.39888 -18.84750 -18.52694 -18.32579 -18.13328 -17.62351 -17.45017 -16.91233 -16.41356 -16.35679 -16.26696 -15.90567 -15.70741 -15.54050 -15.47152 -14.88843 -14.73568 -14.61456 -14.47116 -14.37646 -13.99905 -13.96157 -13.75489 -13.59161 -13.41690 -13.19369 -12.64499 -12.63036 -12.50150 -12.40807 -12.36279 -12.19318 -11.97329 -11.92016 -11.61068 -11.56485 -11.10595 -11.01293 -10.37104 -10.32757 -10.25059 -10.23203 -8.97590 -8.48528 -4.93065 0.31984 0.64004 0.83601 1.29295 1.35443 1.38739 1.43769 1.62227 1.68678 1.77340 2.00734 2.11021 2.99463 3.12471 3.13704 3.28324 3.40541 3.48743 3.48904 3.57907 3.69958 3.74822 3.77092 3.82957 3.83765 3.91180 3.94219 4.10722 4.11326 4.29400 4.35956 4.36359 4.39182 4.43845 4.47439 4.48420 4.64682 4.74119 4.74738 4.83266 4.92599 4.94689 4.95596 5.03681 5.22512 5.29459 5.31276 5.58245 5.69197 5.84785 5.89828 5.93851 6.15833 6.33588 6.40865 6.64626 7.00909 7.59270 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.037 4.037 3 Si 0.679 3.321 4 C -0.151 4.151 5 C 0.071 3.929 6 N -0.466 5.466 7 C 0.092 3.908 8 C 0.490 3.510 9 O -0.510 6.510 10 N -0.719 5.719 11 C 0.124 3.876 12 H 0.117 0.883 13 C -0.134 4.134 14 C -0.122 4.122 15 H 0.103 0.897 16 C 0.127 3.873 17 N -0.292 5.292 18 C -0.053 4.053 19 C -0.051 4.051 20 N -0.272 5.272 21 N -0.079 5.079 22 C -0.138 4.138 23 C 0.109 3.891 24 C -0.127 4.127 25 C -0.097 4.097 26 C -0.145 4.145 27 C -0.065 4.065 28 C -0.086 4.086 29 H 0.375 0.625 30 H 0.072 0.928 31 H -0.256 1.256 32 H -0.260 1.260 33 H 0.169 0.831 34 H 0.119 0.881 35 H 0.124 0.876 36 H 0.402 0.598 37 H 0.094 0.906 38 H 0.083 0.917 39 H 0.109 0.891 40 H 0.102 0.898 41 H 0.190 0.810 42 H 0.190 0.810 43 H 0.081 0.919 44 H 0.090 0.910 45 H 0.115 0.885 46 H 0.125 0.875 47 H 0.123 0.877 48 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.795 6.255 -3.063 11.218 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.147 4.147 3 Si 0.580 3.420 4 C -0.158 4.158 5 C -0.054 4.054 6 N -0.150 5.150 7 C -0.034 4.034 8 C 0.274 3.726 9 O -0.383 6.383 10 N -0.372 5.372 11 C 0.019 3.981 12 H 0.135 0.865 13 C -0.173 4.173 14 C -0.142 4.142 15 H 0.122 0.878 16 C 0.006 3.994 17 N -0.086 5.086 18 C -0.204 4.204 19 C -0.208 4.208 20 N -0.138 5.138 21 N -0.059 5.059 22 C -0.177 4.177 23 C 0.005 3.995 24 C -0.147 4.147 25 C -0.116 4.116 26 C -0.164 4.164 27 C -0.084 4.084 28 C -0.090 4.090 29 H 0.222 0.778 30 H 0.090 0.910 31 H -0.181 1.181 32 H -0.185 1.185 33 H 0.186 0.814 34 H 0.137 0.863 35 H 0.141 0.859 36 H 0.237 0.763 37 H 0.112 0.888 38 H 0.102 0.898 39 H 0.128 0.872 40 H 0.120 0.880 41 H 0.207 0.793 42 H 0.207 0.793 43 H 0.100 0.900 44 H 0.108 0.892 45 H 0.133 0.867 46 H 0.143 0.857 47 H 0.141 0.859 48 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 7.894 5.775 -2.462 10.086 hybrid contribution -0.615 0.868 -0.860 1.368 sum 7.278 6.643 -3.322 10.399 Atomic orbital electron populations 1.86679 1.18282 1.79824 1.49326 1.24022 0.83886 1.09728 0.97115 0.95425 0.91442 0.74694 0.80440 1.19407 1.08181 0.91640 0.96585 1.21485 1.01336 0.93823 0.88713 1.43154 1.54082 1.04645 1.13101 1.21588 0.94502 1.06012 0.81312 1.21096 0.90877 0.76991 0.83605 1.90838 1.19935 1.46717 1.80781 1.45895 1.10621 1.73795 1.06865 1.22531 0.93118 0.96602 0.85853 0.86464 1.23366 1.01619 0.98210 0.94093 1.22645 1.00928 0.98365 0.92269 0.87848 1.22171 0.93834 0.91234 0.92197 1.47530 1.35869 1.15016 1.10158 1.23743 1.05074 1.03946 0.87635 1.23695 1.04153 0.92538 1.00425 1.75181 1.15008 1.25156 0.98487 1.78354 1.11733 0.93949 1.21828 1.23560 1.03515 0.96946 0.93666 1.18150 1.01495 0.85848 0.94017 1.19954 1.05257 0.89233 1.00265 1.20823 0.98365 0.97972 0.94442 1.20662 1.02412 0.96898 0.96470 1.20269 0.97958 0.90944 0.99221 1.18940 1.03109 0.92747 0.94207 0.77795 0.91038 1.18051 1.18523 0.81419 0.86331 0.85856 0.76297 0.88799 0.89791 0.87228 0.88022 0.79252 0.79293 0.90050 0.89196 0.86706 0.85698 0.85934 0.86105 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.90 12.86 -35.23 -0.45 -2.35 16 2 C -0.04 -0.07 3.05 36.00 0.11 0.04 16 3 Si 0.68 -0.19 30.78 -169.99 -5.23 -5.43 16 4 C -0.15 -0.56 5.61 -102.71 -0.58 -1.13 16 5 C 0.07 0.15 9.89 -16.73 -0.17 -0.02 16 6 N -0.47 -0.91 2.27 -115.71 -0.26 -1.18 16 7 C 0.09 -0.21 6.48 -5.20 -0.03 -0.24 16 8 C 0.49 0.17 7.90 -10.98 -0.09 0.09 16 9 O -0.51 -3.14 16.02 5.56 0.09 -3.05 16 10 N -0.72 2.20 5.36 -52.88 -0.28 1.92 16 11 C 0.12 -0.26 4.25 -66.98 -0.28 -0.54 16 12 H 0.12 0.08 7.47 -51.93 -0.39 -0.31 16 13 C -0.13 0.67 7.39 -25.92 -0.19 0.48 16 14 C -0.12 0.41 3.76 -89.81 -0.34 0.07 16 15 H 0.10 -0.19 8.14 -51.93 -0.42 -0.61 16 16 C 0.13 -0.52 6.29 -4.04 -0.03 -0.54 16 17 N -0.29 0.01 3.44 -61.26 -0.21 -0.20 16 18 C -0.05 0.06 11.57 -17.05 -0.20 -0.14 16 19 C -0.05 -0.06 12.05 -17.74 -0.21 -0.28 16 20 N -0.27 -1.37 12.41 30.23 0.38 -1.00 16 21 N -0.08 -0.30 12.93 60.35 0.78 0.48 16 22 C -0.14 0.23 7.44 -25.78 -0.19 0.04 16 23 C 0.11 0.46 6.80 -83.99 -0.57 -0.12 16 24 C -0.13 -0.40 10.00 -39.43 -0.39 -0.80 16 25 C -0.10 -0.27 10.01 -39.54 -0.40 -0.67 16 26 C -0.15 -0.46 9.97 -39.95 -0.40 -0.85 16 27 C -0.07 -0.27 10.05 -39.64 -0.40 -0.67 16 28 C -0.09 -0.43 6.35 -105.14 -0.67 -1.10 16 29 H 0.37 -0.33 8.74 45.56 0.40 0.07 16 30 H 0.07 0.02 7.96 -51.93 -0.41 -0.39 16 31 H -0.26 -0.63 7.05 56.52 0.40 -0.23 16 32 H -0.26 -0.44 7.11 56.52 0.40 -0.04 16 33 H 0.17 -0.11 6.30 -52.49 -0.33 -0.44 16 34 H 0.12 -0.55 8.14 -51.93 -0.42 -0.97 16 35 H 0.12 -0.73 8.12 -51.93 -0.42 -1.15 16 36 H 0.40 -2.67 8.73 -40.82 -0.36 -3.02 16 37 H 0.09 -0.66 8.08 -51.93 -0.42 -1.08 16 38 H 0.08 -0.41 8.14 -51.93 -0.42 -0.84 16 39 H 0.11 -0.75 8.07 -51.93 -0.42 -1.17 16 40 H 0.10 -0.51 7.84 -51.93 -0.41 -0.92 16 41 H 0.19 -0.98 8.06 -52.49 -0.42 -1.41 16 42 H 0.19 -0.33 8.06 -52.49 -0.42 -0.75 16 43 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 44 H 0.09 -0.22 7.89 -51.93 -0.41 -0.63 16 45 H 0.11 0.14 8.06 -52.49 -0.42 -0.29 16 46 H 0.13 0.08 8.06 -52.49 -0.42 -0.35 16 47 H 0.12 0.13 8.06 -52.49 -0.42 -0.29 16 48 H 0.12 0.35 8.06 -52.49 -0.42 -0.08 16 LS Contribution 409.20 15.07 6.17 6.17 Total: 0.00 -15.56 409.20 -10.65 -26.20 By element: Atomic # 1 Polarization: -8.60 SS G_CDS: -6.60 Total: -15.20 kcal Atomic # 6 Polarization: -1.35 SS G_CDS: -5.02 Total: -6.37 kcal Atomic # 7 Polarization: -0.37 SS G_CDS: 0.40 Total: 0.03 kcal Atomic # 8 Polarization: -5.04 SS G_CDS: -0.36 Total: -5.40 kcal Atomic # 14 Polarization: -0.19 SS G_CDS: -5.23 Total: -5.43 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -15.56 -10.65 -26.20 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14928172_9818708.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 167.166 kcal (2) G-P(sol) polarization free energy of solvation -15.555 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 151.611 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.647 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.203 kcal (6) G-S(sol) free energy of system = (1) + (5) 140.964 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds