Wall clock time and date at job start Sun Mar 7 2021 04:25:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53009 * 109.46889 * 2 1 4 4 C 1.53000 * 109.47035 * 240.00611 * 2 1 3 5 5 O 1.45195 * 109.47553 * 120.00119 * 2 1 3 6 6 C 1.34633 * 116.99934 * 59.99871 * 5 2 1 7 7 O 1.21508 * 120.00084 * 0.02562 * 6 5 2 8 8 N 1.34776 * 120.00139 * 180.02562 * 6 5 2 9 9 C 1.46502 * 120.00306 * 180.02562 * 8 6 5 10 10 H 1.09006 * 112.84331 * 336.19382 * 9 8 6 11 11 C 1.54051 * 113.62308 * 107.49826 * 9 8 6 12 12 C 1.53774 * 86.98641 * 139.98176 * 11 9 8 13 13 H 1.09003 * 113.61539 * 219.98609 * 12 11 9 14 14 C 1.50697 * 113.61709 * 89.16135 * 12 11 9 15 15 O 1.21283 * 120.00521 * 260.59183 * 14 12 11 16 16 N 1.34784 * 119.99774 * 80.86289 * 14 12 11 17 17 N 1.40097 * 120.00130 * 179.72966 * 16 14 12 18 18 C 1.34774 * 120.00136 * 180.02562 * 17 16 14 19 19 O 1.21655 * 119.99621 * 0.02562 * 18 17 16 20 20 C 1.47041 * 120.00141 * 179.97438 * 18 17 16 21 21 C 1.36229 * 123.49379 * 179.70484 * 20 18 17 22 22 Cl 1.73601 * 124.60281 * 0.02562 * 21 20 18 23 23 S 1.70446 * 110.78810 * 179.91478 * 21 20 18 24 24 C 1.75486 * 92.46822 * 0.29675 * 23 21 20 25 25 C 1.50700 * 124.68805 * 179.80666 * 24 23 21 26 26 O 1.42895 * 109.47444 * 120.02622 * 25 24 23 27 27 Si 1.86300 * 109.47001 * 0.02704 * 25 24 23 28 28 C 1.32693 * 110.63266 * 359.83019 * 24 23 21 29 29 C 1.53774 * 113.61698 * 204.99631 * 9 8 6 30 30 H 1.09003 * 109.47121 * 299.99994 * 1 2 3 31 31 H 1.08999 * 109.47373 * 59.99656 * 1 2 3 32 32 H 1.08997 * 109.47059 * 179.97438 * 1 2 3 33 33 H 1.09000 * 109.46923 * 180.02562 * 3 2 1 34 34 H 1.08997 * 109.47026 * 299.99951 * 3 2 1 35 35 H 1.08995 * 109.46978 * 60.00250 * 3 2 1 36 36 H 1.09000 * 109.46411 * 299.99339 * 4 2 1 37 37 H 1.08997 * 109.47752 * 59.99515 * 4 2 1 38 38 H 1.09000 * 109.47110 * 179.97438 * 4 2 1 39 39 H 0.97003 * 120.00043 * 359.97438 * 8 6 5 40 40 H 1.09003 * 113.60673 * 25.47598 * 11 9 8 41 41 H 1.08999 * 113.69760 * 254.50477 * 11 9 8 42 42 H 0.97005 * 119.99846 * 359.72750 * 16 14 12 43 43 H 0.97005 * 120.00024 * 359.97438 * 17 16 14 44 44 H 1.09002 * 109.47370 * 240.03274 * 25 24 23 45 45 H 0.96698 * 114.00161 * 300.00544 * 26 25 24 46 46 H 1.48498 * 110.00174 * 58.67818 * 27 25 24 47 47 H 1.48499 * 110.00411 * 180.02562 * 27 25 24 48 48 H 1.07994 * 123.45750 * 180.02562 * 28 24 23 49 49 H 1.09001 * 113.61576 * 105.46751 * 29 9 8 50 50 H 1.08997 * 113.69285 * 334.57931 * 29 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 6 2.0400 -0.7211 -1.2493 5 8 2.0141 -0.6845 1.1855 6 6 1.6523 -1.9723 1.3382 7 8 0.9517 -2.5096 0.5035 8 7 2.0674 -2.6654 2.4170 9 6 1.6742 -4.0669 2.5830 10 1 0.7602 -4.3167 2.0441 11 6 2.8249 -5.0631 2.3450 12 6 2.2741 -5.8596 3.5395 13 1 3.0500 -6.2649 4.1891 14 6 1.2380 -6.8844 3.1557 15 8 0.0590 -6.6357 3.2932 16 7 1.6218 -8.0795 2.6647 17 7 0.6588 -9.0343 2.3131 18 6 1.0425 -10.2295 1.8226 19 8 2.2252 -10.4794 1.6856 20 6 0.0318 -11.2319 1.4542 21 6 0.3393 -12.4585 0.9473 22 17 1.9530 -13.0296 0.6586 23 16 -1.0756 -13.3572 0.6380 24 6 -2.1144 -12.0562 1.1928 25 6 -3.6201 -12.1124 1.2182 26 8 -4.0808 -11.9390 2.5596 27 14 -4.1907 -13.7649 0.5744 28 6 -1.3909 -11.0158 1.5866 29 6 1.6745 -4.5376 4.0469 30 1 -0.3633 0.5138 0.8900 31 1 -0.3634 0.5139 -0.8899 32 1 -0.3633 -1.0276 -0.0005 33 1 3.1299 1.4426 -0.0005 34 1 1.6766 1.9564 -0.8900 35 1 1.6766 1.9564 0.8900 36 1 1.6766 -1.7488 -1.2493 37 1 1.6766 -0.2073 -2.1393 38 1 3.1300 -0.7207 -1.2496 39 1 2.6270 -2.2365 3.0832 40 1 3.8133 -4.6387 2.5215 41 1 2.7548 -5.5948 1.3960 42 1 2.5648 -8.2784 2.5546 43 1 -0.2842 -8.8355 2.4235 44 1 -4.0240 -11.3186 0.5897 45 1 -3.7597 -12.6115 3.1758 46 1 -3.6209 -14.8573 1.4034 47 1 -5.6740 -13.8329 0.5936 48 1 -1.8212 -10.1014 1.9674 49 1 0.6762 -4.6453 4.4712 50 1 2.3483 -3.9705 4.6892 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14937822_13431040.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:25:33 Heat of formation + Delta-G solvation = -85.477153 kcal Electronic energy + Delta-G solvation = -36835.269537 eV Core-core repulsion = 31598.759456 eV Total energy + Delta-G solvation = -5236.510080 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 432.105 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -42.14650 -41.56357 -40.92296 -39.36882 -38.91809 -38.03719 -37.62402 -37.14283 -36.38717 -35.24620 -34.11119 -32.64175 -31.65351 -28.29854 -28.25398 -27.54603 -27.00812 -26.94270 -25.70153 -23.73012 -22.77478 -22.49454 -21.57248 -21.05459 -20.27589 -19.51370 -19.11947 -19.01557 -18.43393 -17.96323 -17.71869 -17.18230 -17.05142 -16.91865 -16.67754 -16.41312 -16.37532 -15.91212 -15.82241 -15.60919 -15.40759 -15.27599 -14.95247 -14.61079 -14.47043 -14.45188 -14.35865 -14.02467 -13.87377 -13.61334 -13.40888 -13.22254 -13.08669 -13.07861 -12.81563 -12.79338 -12.63085 -12.55060 -12.44728 -12.41258 -12.20620 -12.16454 -11.95476 -11.94016 -11.80179 -11.29668 -11.26015 -11.08862 -10.92461 -10.87784 -10.15888 -10.01370 -9.89063 -9.45024 -5.24467 -0.72189 -0.30638 0.30111 0.53420 0.66566 1.00044 1.03059 1.23315 1.29281 1.37982 1.75236 1.90921 2.07876 2.77705 3.03428 3.12616 3.16854 3.23256 3.26973 3.45991 3.57051 3.73951 3.75152 3.81074 3.86538 4.00439 4.01546 4.19890 4.30477 4.30759 4.43344 4.54231 4.59161 4.61951 4.66039 4.66317 4.68676 4.78490 4.81160 4.84828 4.89021 4.96552 4.99343 5.11479 5.31403 5.40134 5.46479 5.50218 5.56498 5.63740 6.14056 6.33298 6.44729 6.70558 7.19042 7.46526 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.136 3.864 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.650 3.350 7 O -0.564 6.564 8 N -0.701 5.701 9 C 0.140 3.860 10 H 0.125 0.875 11 C -0.139 4.139 12 C -0.128 4.128 13 H 0.120 0.880 14 C 0.532 3.468 15 O -0.530 6.530 16 N -0.516 5.516 17 N -0.517 5.517 18 C 0.580 3.420 19 O -0.518 6.518 20 C -0.155 4.155 21 C -0.110 4.110 22 Cl 0.030 6.970 23 S 0.252 5.748 24 C -0.232 4.232 25 C -0.033 4.033 26 O -0.520 6.520 27 Si 0.648 3.352 28 C -0.072 4.072 29 C -0.122 4.122 30 H 0.060 0.940 31 H 0.072 0.928 32 H 0.087 0.913 33 H 0.067 0.933 34 H 0.082 0.918 35 H 0.067 0.933 36 H 0.087 0.913 37 H 0.072 0.928 38 H 0.060 0.940 39 H 0.407 0.593 40 H 0.104 0.896 41 H 0.082 0.918 42 H 0.435 0.565 43 H 0.432 0.568 44 H 0.134 0.866 45 H 0.379 0.621 46 H -0.236 1.236 47 H -0.229 1.229 48 H 0.160 0.840 49 H 0.096 0.904 50 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.895 -0.285 0.078 0.943 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.242 4.242 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.403 3.597 7 O -0.453 6.453 8 N -0.360 5.360 9 C 0.036 3.964 10 H 0.142 0.858 11 C -0.178 4.178 12 C -0.151 4.151 13 H 0.138 0.862 14 C 0.318 3.682 15 O -0.404 6.404 16 N -0.265 5.265 17 N -0.266 5.266 18 C 0.366 3.634 19 O -0.393 6.393 20 C -0.175 4.175 21 C -0.258 4.258 22 Cl 0.059 6.941 23 S 0.517 5.483 24 C -0.349 4.349 25 C -0.145 4.145 26 O -0.327 6.327 27 Si 0.546 3.454 28 C -0.101 4.101 29 C -0.161 4.161 30 H 0.079 0.921 31 H 0.091 0.909 32 H 0.106 0.894 33 H 0.086 0.914 34 H 0.100 0.900 35 H 0.086 0.914 36 H 0.106 0.894 37 H 0.090 0.910 38 H 0.079 0.921 39 H 0.242 0.758 40 H 0.123 0.877 41 H 0.100 0.900 42 H 0.277 0.723 43 H 0.276 0.724 44 H 0.151 0.849 45 H 0.228 0.772 46 H -0.160 1.160 47 H -0.152 1.152 48 H 0.177 0.823 49 H 0.115 0.885 50 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -0.333 -2.192 -1.086 2.469 hybrid contribution 1.009 1.629 1.931 2.720 sum 0.676 -0.564 0.845 1.220 Atomic orbital electron populations 1.22523 0.93839 1.05080 1.02708 1.22116 0.94458 0.91552 0.81878 1.21877 1.02302 0.92366 1.03331 1.22520 1.01571 1.03466 0.96550 1.86303 1.71475 1.23464 1.46733 1.18178 0.78610 0.80564 0.82308 1.90924 1.40822 1.70495 1.43060 1.44723 1.55409 1.12080 1.23739 1.22725 0.98855 0.77500 0.97286 0.85766 1.23602 1.00081 0.96636 0.97527 1.22088 0.98008 0.93913 1.01079 0.86192 1.20369 0.90419 0.80581 0.76813 1.90769 1.17954 1.78120 1.53562 1.44849 1.05988 1.09883 1.65748 1.44657 1.06030 1.09931 1.66015 1.17420 0.88430 0.79924 0.77637 1.90904 1.16773 1.78078 1.53568 1.19796 0.93458 0.94461 1.09805 1.25560 0.95531 0.98877 1.05787 1.98450 1.15085 1.87051 1.93499 1.83411 0.90364 1.14596 1.59926 1.24784 1.00987 0.98559 1.10571 1.24440 0.87994 1.13780 0.88309 1.86657 1.73850 1.54501 1.17652 0.95289 0.85352 0.74754 0.90054 1.21042 0.89663 0.99875 0.99566 1.23294 1.03740 0.92859 0.96187 0.92098 0.90947 0.89422 0.91410 0.89954 0.91391 0.89434 0.90952 0.92135 0.75768 0.87720 0.89960 0.72282 0.72450 0.84881 0.77231 1.15957 1.15152 0.82296 0.88525 0.87915 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.33 8.37 37.16 0.31 -0.01 16 2 C 0.14 0.22 1.13 -90.62 -0.10 0.12 16 3 C -0.14 0.07 8.85 37.16 0.33 0.40 16 4 C -0.18 -0.30 8.37 37.16 0.31 0.02 16 5 O -0.36 -0.94 9.94 -40.31 -0.40 -1.34 16 6 C 0.65 2.00 8.06 54.05 0.44 2.44 16 7 O -0.56 -3.21 11.48 -19.28 -0.22 -3.43 16 8 N -0.70 0.09 5.36 -57.79 -0.31 -0.22 16 9 C 0.14 -0.06 3.92 -66.98 -0.26 -0.32 16 10 H 0.12 0.32 7.46 -51.93 -0.39 -0.06 16 11 C -0.14 0.33 7.48 -25.78 -0.19 0.14 16 12 C -0.13 0.34 4.34 -90.96 -0.39 -0.06 16 13 H 0.12 -0.60 8.14 -51.93 -0.42 -1.02 16 14 C 0.53 0.21 7.19 -10.98 -0.08 0.13 16 15 O -0.53 -1.91 15.67 5.56 0.09 -1.82 16 16 N -0.52 -0.04 6.26 31.22 0.20 0.15 16 17 N -0.52 -0.44 6.24 30.34 0.19 -0.25 16 18 C 0.58 1.28 7.90 -12.69 -0.10 1.18 16 19 O -0.52 -2.37 14.75 5.23 0.08 -2.29 16 20 C -0.15 -0.14 5.98 -104.58 -0.63 -0.77 16 21 C -0.11 -0.11 6.87 30.01 0.21 0.10 16 22 Cl 0.03 0.07 27.20 -51.86 -1.41 -1.34 16 23 S 0.25 -0.39 20.17 -107.50 -2.17 -2.56 16 24 C -0.23 0.40 5.68 -36.20 -0.21 0.20 16 25 C -0.03 0.08 2.95 36.01 0.11 0.18 16 26 O -0.52 0.48 12.85 -35.23 -0.45 0.03 16 27 Si 0.65 -1.70 30.91 -169.99 -5.25 -6.95 16 28 C -0.07 0.08 9.71 -39.00 -0.38 -0.30 16 29 C -0.12 0.28 7.21 -25.92 -0.19 0.10 16 30 H 0.06 0.09 8.14 -51.93 -0.42 -0.33 16 31 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 32 H 0.09 0.35 5.88 -51.93 -0.31 0.05 16 33 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 34 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 35 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 36 H 0.09 0.33 5.88 -51.93 -0.31 0.03 16 37 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 38 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 39 H 0.41 -1.06 8.84 -40.82 -0.36 -1.42 16 40 H 0.10 -0.40 8.14 -51.93 -0.42 -0.83 16 41 H 0.08 -0.11 8.09 -51.93 -0.42 -0.53 16 42 H 0.43 -0.47 8.00 -182.60 -1.46 -1.94 16 43 H 0.43 0.00 6.54 -182.60 -1.19 -1.20 16 44 H 0.13 -0.44 7.96 -51.93 -0.41 -0.85 16 45 H 0.38 -1.41 8.70 45.56 0.40 -1.02 16 46 H -0.24 0.25 7.11 56.52 0.40 0.66 16 47 H -0.23 -0.06 7.11 56.52 0.40 0.34 16 48 H 0.16 -0.37 7.10 -52.49 -0.37 -0.75 16 49 H 0.10 -0.05 7.41 -51.93 -0.38 -0.44 16 50 H 0.10 -0.47 8.12 -51.93 -0.42 -0.89 16 LS Contribution 442.31 15.07 6.67 6.67 Total: 0.00 -10.22 442.31 -12.46 -22.69 By element: Atomic # 1 Polarization: -4.22 SS G_CDS: -8.63 Total: -12.85 kcal Atomic # 6 Polarization: 4.35 SS G_CDS: -0.83 Total: 3.52 kcal Atomic # 7 Polarization: -0.39 SS G_CDS: 0.07 Total: -0.32 kcal Atomic # 8 Polarization: -7.94 SS G_CDS: -0.91 Total: -8.85 kcal Atomic # 14 Polarization: -1.70 SS G_CDS: -5.25 Total: -6.95 kcal Atomic # 16 Polarization: -0.39 SS G_CDS: -2.17 Total: -2.56 kcal Atomic # 17 Polarization: 0.07 SS G_CDS: -1.41 Total: -1.34 kcal Total LS contribution 6.67 Total: 6.67 kcal Total: -10.22 -12.46 -22.69 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14937822_13431040.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.791 kcal (2) G-P(sol) polarization free energy of solvation -10.222 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.013 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.465 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.686 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.477 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds