Wall clock time and date at job start Sun Mar 7 2021 04:27:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.37644 * 125.67619 * 2 1 4 4 C 1.46670 * 126.22412 * 359.97438 * 3 2 1 5 5 O 1.21699 * 120.00126 * 354.29581 * 4 3 2 6 6 N 1.34779 * 119.99853 * 174.29489 * 4 3 2 7 7 N 1.40105 * 119.99625 * 185.11665 * 6 4 3 8 8 C 1.34779 * 119.99625 * 179.97438 * 7 6 4 9 9 O 1.21278 * 119.99866 * 359.97438 * 8 7 6 10 10 C 1.50696 * 120.00127 * 179.97438 * 8 7 6 11 11 H 1.08996 * 112.85098 * 309.66992 * 10 8 7 12 12 C 1.53788 * 113.61055 * 80.86018 * 10 8 7 13 13 C 1.54052 * 86.98221 * 89.16319 * 12 10 8 14 14 H 1.08994 * 113.61632 * 270.88272 * 13 12 10 15 15 N 1.46503 * 113.69509 * 139.98890 * 13 12 10 16 16 C 1.34777 * 120.00251 * 107.46655 * 15 13 12 17 17 O 1.21509 * 119.99489 * 359.97438 * 16 15 13 18 18 O 1.34634 * 120.00207 * 180.02562 * 16 15 13 19 19 C 1.45202 * 117.00205 * 180.02562 * 18 16 15 20 20 C 1.52996 * 109.47186 * 59.99468 * 19 18 16 21 21 C 1.53001 * 109.47228 * 179.97438 * 19 18 16 22 22 C 1.53003 * 109.46497 * 299.99903 * 19 18 16 23 23 C 1.53773 * 113.61581 * 178.46838 * 10 8 7 24 24 C 1.37883 * 107.54688 * 180.02562 * 3 2 1 25 25 C 1.39877 * 107.09699 * 359.97438 * 24 3 2 26 26 Br 1.89096 * 126.07586 * 180.02562 * 25 24 3 27 27 C 1.35511 * 107.84922 * 0.26645 * 25 24 3 28 28 C 1.50696 * 125.56577 * 179.70197 * 27 25 24 29 29 O 1.42889 * 109.47609 * 54.18514 * 28 27 25 30 30 Si 1.86309 * 109.47327 * 294.18030 * 28 27 25 31 31 H 1.09001 * 109.46840 * 94.07471 * 1 2 3 32 32 H 1.08998 * 109.46887 * 214.07712 * 1 2 3 33 33 H 1.09000 * 109.47085 * 334.07532 * 1 2 3 34 34 H 0.96995 * 120.00363 * 5.11150 * 6 4 3 35 35 H 0.96995 * 120.00012 * 359.97438 * 7 6 4 36 36 H 1.08996 * 113.61490 * 203.66623 * 12 10 8 37 37 H 1.08994 * 113.61843 * 334.57135 * 12 10 8 38 38 H 0.97008 * 119.99637 * 287.46689 * 15 13 12 39 39 H 1.09004 * 109.47144 * 60.00149 * 20 19 18 40 40 H 1.08994 * 109.47032 * 179.97438 * 20 19 18 41 41 H 1.09000 * 109.47432 * 300.00517 * 20 19 18 42 42 H 1.09003 * 109.46605 * 59.99647 * 21 19 18 43 43 H 1.08992 * 109.46954 * 179.97438 * 21 19 18 44 44 H 1.08994 * 109.46913 * 300.00275 * 21 19 18 45 45 H 1.09000 * 109.47212 * 60.00039 * 22 19 18 46 46 H 1.09003 * 109.46640 * 180.02562 * 22 19 18 47 47 H 1.09001 * 109.47204 * 299.99586 * 22 19 18 48 48 H 1.08997 * 113.61432 * 25.43798 * 23 10 8 49 49 H 1.09007 * 113.61541 * 156.25662 * 23 10 8 50 50 H 1.08008 * 126.44833 * 180.02562 * 24 3 2 51 51 H 1.09005 * 109.47068 * 174.18673 * 28 27 25 52 52 H 0.96701 * 114.00483 * 179.97438 * 29 28 27 53 53 H 1.48498 * 109.99739 * 303.95625 * 30 28 27 54 54 H 1.48498 * 109.99807 * 65.27232 * 30 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1181 0.0000 4 6 1.8121 2.5122 -0.0005 5 8 0.6263 2.7648 -0.1058 6 7 2.7067 3.5136 0.1156 7 7 2.2647 4.8388 0.2230 8 6 3.1593 5.8401 0.3396 9 8 4.3467 5.5940 0.3520 10 6 2.6840 7.2656 0.4545 11 1 1.9648 7.5356 -0.3187 12 6 2.2370 7.6532 1.8740 13 6 3.6989 8.0635 2.1345 14 1 4.3201 7.2508 2.5105 15 7 3.8344 9.2931 2.9194 16 6 4.2465 9.2324 4.2012 17 8 4.5053 8.1578 4.7058 18 8 4.3705 10.3623 4.9227 19 6 4.8198 10.2215 6.2962 20 6 6.2027 9.5672 6.3159 21 6 4.8999 11.6021 6.9508 22 6 3.8307 9.3466 7.0690 23 6 3.8246 8.2839 0.6177 24 6 3.5781 0.6891 -0.0006 25 6 3.5529 -0.7095 -0.0003 26 35 5.0610 -1.8503 -0.0002 27 6 2.2558 -1.1015 -0.0056 28 6 1.7714 -2.5285 -0.0137 29 8 2.3619 -3.2382 1.0770 30 14 2.2574 -3.3403 -1.6186 31 1 -0.3633 -0.0730 -1.0251 32 1 -0.3633 -0.8512 0.5758 33 1 -0.3633 0.9242 0.4493 34 1 3.6564 3.3169 0.1248 35 1 1.3150 5.0355 0.2134 36 1 1.5379 8.4891 1.8987 37 1 1.9063 6.8058 2.4744 38 1 3.6274 10.1509 2.5165 39 1 6.9074 10.1904 5.7652 40 1 6.5401 9.4619 7.3469 41 1 6.1461 8.5837 5.8494 42 1 3.9148 12.0685 6.9366 43 1 5.2368 11.4962 7.9819 44 1 5.6047 12.2249 6.4000 45 1 3.7741 8.3631 6.6026 46 1 4.1677 9.2412 8.1003 47 1 2.8455 9.8127 7.0550 48 1 4.7747 7.9453 0.2045 49 1 3.5592 9.2917 0.2981 50 1 4.4583 1.3151 -0.0004 51 1 0.6862 -2.5444 0.0875 52 1 2.0939 -4.1655 1.1340 53 1 1.7288 -2.5572 -2.7643 54 1 3.7362 -3.4393 -1.7103 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14937822_5000100.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:27:40 Heat of formation + Delta-G solvation = -62.300370 kcal Electronic energy + Delta-G solvation = -39307.822322 eV Core-core repulsion = 33910.409417 eV Total energy + Delta-G solvation = -5397.412906 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 473.109 amu Computer time = 1.85 seconds Orbital eigenvalues (eV) -43.04956 -42.17900 -41.64001 -40.56670 -39.16939 -37.81228 -37.69575 -36.69302 -35.41561 -34.69054 -34.19559 -33.30323 -31.83455 -30.94823 -28.41212 -28.33223 -27.68327 -27.49051 -26.80638 -26.52165 -24.07369 -23.52611 -22.75313 -22.16295 -21.38244 -20.87231 -20.20028 -19.28979 -19.18814 -18.77087 -18.48249 -18.24170 -17.64677 -17.35398 -17.22953 -16.97215 -16.90480 -16.42740 -16.16872 -15.90728 -15.71475 -15.58540 -15.42736 -15.39782 -14.93625 -14.69366 -14.65742 -14.49279 -14.46783 -13.98780 -13.82253 -13.77036 -13.46952 -13.39281 -13.31978 -13.16923 -13.14927 -12.94894 -12.90014 -12.85912 -12.70449 -12.56146 -12.43222 -12.34071 -11.95577 -11.86121 -11.76266 -11.66373 -11.43358 -11.25386 -11.14246 -10.92913 -10.64029 -10.21703 -9.98082 -9.79428 -9.35649 -5.03836 -0.11890 0.29861 0.56983 0.81315 1.13427 1.21024 1.24755 1.64880 1.69409 1.71217 1.86878 2.08384 2.67193 3.10254 3.11294 3.14943 3.28199 3.32040 3.58312 3.61315 3.66162 3.69235 3.70839 3.76308 3.90551 3.90932 4.10162 4.12606 4.18266 4.25345 4.39308 4.49321 4.52510 4.57037 4.58135 4.64865 4.68532 4.72579 4.74063 4.80681 4.81495 4.84458 4.94152 4.99545 5.06029 5.12077 5.22919 5.24945 5.27768 5.31995 5.39685 5.50928 5.56606 5.64972 6.18693 6.37723 6.50736 6.86194 7.02105 7.31673 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.052 3.948 2 N -0.392 5.392 3 C -0.046 4.046 4 C 0.601 3.399 5 O -0.558 6.558 6 N -0.510 5.510 7 N -0.509 5.509 8 C 0.529 3.471 9 O -0.565 6.565 10 C -0.116 4.116 11 H 0.159 0.841 12 C -0.126 4.126 13 C 0.126 3.874 14 H 0.085 0.915 15 N -0.685 5.685 16 C 0.641 3.359 17 O -0.598 6.598 18 O -0.367 6.367 19 C 0.127 3.873 20 C -0.181 4.181 21 C -0.137 4.137 22 C -0.180 4.180 23 C -0.112 4.112 24 C -0.109 4.109 25 C -0.184 4.184 26 Br -0.011 7.011 27 C 0.088 3.912 28 C -0.053 4.053 29 O -0.547 6.547 30 Si 0.764 3.236 31 H 0.095 0.905 32 H 0.115 0.885 33 H 0.102 0.898 34 H 0.438 0.562 35 H 0.442 0.558 36 H 0.133 0.867 37 H 0.070 0.930 38 H 0.421 0.579 39 H 0.062 0.938 40 H 0.086 0.914 41 H 0.059 0.941 42 H 0.071 0.929 43 H 0.098 0.902 44 H 0.070 0.930 45 H 0.061 0.939 46 H 0.086 0.914 47 H 0.064 0.936 48 H 0.076 0.924 49 H 0.137 0.863 50 H 0.172 0.828 51 H 0.105 0.895 52 H 0.409 0.591 53 H -0.304 1.304 54 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.966 1.183 -1.515 7.227 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 N -0.066 5.066 3 C -0.161 4.161 4 C 0.389 3.611 5 O -0.437 6.437 6 N -0.257 5.257 7 N -0.259 5.259 8 C 0.317 3.683 9 O -0.441 6.441 10 C -0.139 4.139 11 H 0.177 0.823 12 C -0.165 4.165 13 C 0.022 3.978 14 H 0.103 0.897 15 N -0.345 5.345 16 C 0.395 3.605 17 O -0.489 6.489 18 O -0.281 6.281 19 C 0.091 3.909 20 C -0.238 4.238 21 C -0.194 4.194 22 C -0.237 4.237 23 C -0.150 4.150 24 C -0.137 4.137 25 C -0.269 4.269 26 Br 0.073 6.927 27 C -0.034 4.034 28 C -0.162 4.162 29 O -0.357 6.357 30 Si 0.665 3.335 31 H 0.113 0.887 32 H 0.133 0.867 33 H 0.121 0.879 34 H 0.282 0.718 35 H 0.287 0.713 36 H 0.151 0.849 37 H 0.088 0.912 38 H 0.260 0.740 39 H 0.081 0.919 40 H 0.105 0.895 41 H 0.078 0.922 42 H 0.091 0.909 43 H 0.116 0.884 44 H 0.089 0.911 45 H 0.079 0.921 46 H 0.104 0.896 47 H 0.083 0.917 48 H 0.095 0.905 49 H 0.155 0.845 50 H 0.189 0.811 51 H 0.123 0.877 52 H 0.262 0.738 53 H -0.232 1.232 54 H -0.178 1.178 Dipole moment (debyes) X Y Z Total from point charges -5.946 0.983 -1.840 6.301 hybrid contribution -0.075 0.803 0.227 0.838 sum -6.020 1.786 -1.613 6.484 Atomic orbital electron populations 1.22688 0.73391 1.07036 1.05620 1.43907 1.08137 1.03261 1.51311 1.19472 0.90091 0.86980 1.19600 1.16664 0.84957 0.82783 0.76690 1.90818 1.16303 1.84406 1.52175 1.44329 1.10621 0.96078 1.74679 1.44985 1.11484 0.94068 1.75366 1.21105 0.85361 0.86893 0.74950 1.90769 1.17625 1.84589 1.51146 1.22117 1.02008 0.87629 1.02115 0.82341 1.23590 0.96932 1.03243 0.92772 1.22758 0.98011 0.86060 0.90957 0.89700 1.44681 1.69729 1.11708 1.08347 1.18487 0.76549 0.82408 0.83091 1.90917 1.56274 1.30319 1.71416 1.86309 1.80811 1.33550 1.27459 1.22349 0.94076 0.98445 0.76040 1.22479 0.95488 1.01764 1.04099 1.21885 1.03817 0.92551 1.01117 1.22468 0.99140 1.00642 1.01429 1.23334 0.98741 1.00459 0.92480 1.21564 0.95741 0.93407 1.02962 1.21011 0.92285 0.94697 1.18897 1.96643 1.35129 1.62899 1.98022 1.20163 0.89087 0.89462 1.04671 1.24310 1.01296 0.87532 1.03058 1.86501 1.71965 1.29257 1.48013 0.95182 0.81382 0.86215 0.70700 0.88697 0.86656 0.87936 0.71830 0.71344 0.84938 0.91168 0.74035 0.91911 0.89470 0.92158 0.90949 0.88388 0.91126 0.92053 0.89554 0.91665 0.90528 0.84462 0.81077 0.87720 0.73825 1.23228 1.17796 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.09 10.23 127.77 1.31 1.21 16 2 N -0.39 -1.64 3.16 -519.61 -1.64 -3.28 16 3 C -0.05 -0.27 6.88 40.35 0.28 0.01 16 4 C 0.60 3.28 7.88 86.44 0.68 3.96 16 5 O -0.56 -4.52 14.50 -4.35 -0.06 -4.58 16 6 N -0.51 -1.59 6.24 -176.39 -1.10 -2.70 16 7 N -0.51 -0.11 6.26 -173.53 -1.09 -1.20 16 8 C 0.53 0.60 7.19 87.66 0.63 1.23 16 9 O -0.56 -5.11 15.67 -3.02 -0.05 -5.16 16 10 C -0.12 0.79 4.34 -11.02 -0.05 0.74 16 11 H 0.16 -2.19 8.14 -2.39 -0.02 -2.21 16 12 C -0.13 0.74 7.48 31.22 0.23 0.98 16 13 C 0.13 -0.02 3.91 45.61 0.18 0.16 16 14 H 0.08 0.71 7.46 -2.39 -0.02 0.69 16 15 N -0.68 0.01 5.36 -567.17 -3.04 -3.04 16 16 C 0.64 4.88 8.06 129.79 1.05 5.93 16 17 O -0.60 -8.57 11.48 19.81 0.23 -8.34 16 18 O -0.37 -2.14 9.94 -55.43 -0.55 -2.69 16 19 C 0.13 0.48 1.13 -10.79 -0.01 0.47 16 20 C -0.18 -0.88 8.37 71.98 0.60 -0.28 16 21 C -0.14 0.24 8.85 71.98 0.64 0.88 16 22 C -0.18 -0.74 8.37 71.98 0.60 -0.14 16 23 C -0.11 0.62 7.21 31.12 0.22 0.84 16 24 C -0.11 -0.62 10.34 22.58 0.23 -0.39 16 25 C -0.18 -1.37 6.11 22.04 0.13 -1.24 16 26 Br -0.01 -0.08 30.60 -20.37 -0.62 -0.71 16 27 C 0.09 0.42 5.30 41.34 0.22 0.64 16 28 C -0.05 0.11 2.74 71.23 0.20 0.30 16 29 O -0.55 1.12 12.13 -148.98 -1.81 -0.69 16 30 Si 0.76 -1.72 31.50 68.60 2.16 0.44 16 31 H 0.09 -0.36 8.14 -2.39 -0.02 -0.38 16 32 H 0.12 -0.82 7.11 -2.39 -0.02 -0.84 16 33 H 0.10 0.06 6.22 -2.39 -0.01 0.05 16 34 H 0.44 1.11 6.90 -213.32 -1.47 -0.37 16 35 H 0.44 -1.44 8.01 -213.32 -1.71 -3.15 16 36 H 0.13 -1.44 8.14 -2.39 -0.02 -1.46 16 37 H 0.07 -0.20 8.09 -2.39 -0.02 -0.22 16 38 H 0.42 -2.64 8.84 -92.70 -0.82 -3.45 16 39 H 0.06 0.26 8.14 -2.38 -0.02 0.24 16 40 H 0.09 0.12 8.14 -2.39 -0.02 0.10 16 41 H 0.06 0.66 5.88 -2.39 -0.01 0.65 16 42 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 43 H 0.10 -0.47 8.14 -2.39 -0.02 -0.49 16 44 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 45 H 0.06 0.61 5.88 -2.39 -0.01 0.60 16 46 H 0.09 0.07 8.14 -2.39 -0.02 0.05 16 47 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 48 H 0.08 -0.04 7.41 -2.39 -0.02 -0.05 16 49 H 0.14 -1.67 8.12 -2.38 -0.02 -1.69 16 50 H 0.17 0.28 7.45 -2.91 -0.02 0.26 16 51 H 0.11 -0.85 6.54 -2.38 -0.02 -0.86 16 52 H 0.41 -5.22 8.74 -74.06 -0.65 -5.87 16 53 H -0.30 -1.59 7.11 99.48 0.71 -0.88 16 54 H -0.25 -0.97 5.92 99.48 0.59 -0.38 16 Total: 0.00 -32.37 458.38 -4.15 -36.52 By element: Atomic # 1 Polarization: -16.16 SS G_CDS: -3.72 Total: -19.88 kcal Atomic # 6 Polarization: 8.16 SS G_CDS: 7.14 Total: 15.30 kcal Atomic # 7 Polarization: -3.34 SS G_CDS: -6.87 Total: -10.22 kcal Atomic # 8 Polarization: -19.22 SS G_CDS: -2.24 Total: -21.46 kcal Atomic # 14 Polarization: -1.72 SS G_CDS: 2.16 Total: 0.44 kcal Atomic # 35 Polarization: -0.08 SS G_CDS: -0.62 Total: -0.71 kcal Total: -32.37 -4.15 -36.52 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14937822_5000100.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.777 kcal (2) G-P(sol) polarization free energy of solvation -32.372 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.149 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.151 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.523 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.300 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.85 seconds