Wall clock time and date at job start Sun Mar 7 2021 01:59:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.42895 * 109.46971 * 2 1 4 4 C 1.35903 * 116.99930 * 84.82022 * 3 2 1 5 5 C 1.38733 * 120.05594 * 174.62678 * 4 3 2 6 6 C 1.38142 * 119.94584 * 180.02562 * 5 4 3 7 7 C 1.38263 * 120.05815 * 0.02562 * 6 5 4 8 8 C 1.50699 * 119.95049 * 179.97438 * 7 6 5 9 9 O 1.42902 * 109.46913 * 299.99860 * 8 7 6 10 10 Si 1.86296 * 109.47411 * 180.02562 * 8 7 6 11 11 C 1.38271 * 120.10925 * 0.24814 * 7 6 5 12 12 C 1.38147 * 120.05354 * 359.45416 * 11 7 6 13 13 C 1.50693 * 109.47253 * 240.00028 * 2 1 3 14 14 O 1.21284 * 120.00275 * 119.99979 * 13 2 1 15 15 N 1.34783 * 119.99853 * 299.99761 * 13 2 1 16 16 C 1.46499 * 119.99837 * 179.97438 * 15 13 2 17 17 C 1.52993 * 109.47337 * 180.02562 * 16 15 13 18 18 H 1.09005 * 109.47432 * 305.00192 * 17 16 15 19 19 C 1.52999 * 109.47148 * 65.00021 * 17 16 15 20 20 C 1.53001 * 109.47386 * 179.97438 * 19 17 16 21 21 C 1.52995 * 109.47408 * 300.00201 * 20 19 17 22 22 H 1.09000 * 109.47282 * 300.00168 * 21 20 19 23 23 C 1.53001 * 109.47408 * 179.97438 * 21 20 19 24 24 O 1.42901 * 109.47082 * 64.99869 * 23 21 20 25 25 C 1.52999 * 109.47011 * 59.99570 * 21 20 19 26 26 C 1.52995 * 109.47520 * 185.00144 * 17 16 15 27 27 H 1.08996 * 109.47473 * 60.00252 * 1 2 3 28 28 H 1.09007 * 109.47046 * 180.02562 * 1 2 3 29 29 H 1.08999 * 109.47441 * 299.99847 * 1 2 3 30 30 H 1.09003 * 109.46851 * 119.99809 * 2 1 3 31 31 H 1.08003 * 120.02558 * 359.97438 * 5 4 3 32 32 H 1.08001 * 119.97247 * 179.97438 * 6 5 4 33 33 H 1.08999 * 109.46908 * 59.99662 * 8 7 6 34 34 H 0.96701 * 114.00318 * 300.00351 * 9 8 7 35 35 H 1.48500 * 110.00494 * 58.67664 * 10 8 7 36 36 H 1.48502 * 110.00186 * 180.02562 * 10 8 7 37 37 H 1.08000 * 119.97479 * 179.70568 * 11 7 6 38 38 H 1.08003 * 120.03188 * 180.24941 * 12 11 7 39 39 H 0.97000 * 120.00236 * 0.02562 * 15 13 2 40 40 H 1.09003 * 109.47520 * 300.00456 * 16 15 13 41 41 H 1.09008 * 109.47001 * 60.00282 * 16 15 13 42 42 H 1.08998 * 109.47254 * 300.00596 * 19 17 16 43 43 H 1.09001 * 109.47075 * 60.00503 * 19 17 16 44 44 H 1.09004 * 109.46968 * 179.97438 * 20 19 17 45 45 H 1.09000 * 109.47037 * 60.00519 * 20 19 17 46 46 H 1.09001 * 109.47423 * 185.00336 * 23 21 20 47 47 H 1.09004 * 109.46603 * 304.99729 * 23 21 20 48 48 H 0.96705 * 113.99545 * 180.02562 * 24 23 21 49 49 H 1.08998 * 109.47254 * 179.97438 * 25 21 20 50 50 H 1.09005 * 109.47281 * 60.00388 * 25 21 20 51 51 H 1.09000 * 109.47282 * 300.00392 * 26 17 16 52 52 H 1.09004 * 109.47102 * 60.00356 * 26 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3472 0.0000 4 6 2.1089 1.9654 1.2060 5 6 2.6681 3.2320 1.2922 6 6 2.7717 3.8580 2.5192 7 6 2.3191 3.2231 3.6610 8 6 2.4339 3.9080 4.9985 9 8 3.8085 4.1820 5.2769 10 14 1.7413 2.7991 6.3256 11 6 1.7665 1.9583 3.5786 12 6 1.6550 1.3306 2.3530 13 6 2.0323 -0.7104 -1.2304 14 8 2.7296 -0.1210 -2.0288 15 7 1.7068 -2.0008 -1.4436 16 6 2.1947 -2.6912 -2.6401 17 6 1.6844 -4.1335 -2.6404 18 1 1.9728 -4.6212 -1.7092 19 6 0.1595 -4.1350 -2.7658 20 6 -0.3508 -5.5774 -2.7668 21 6 0.2588 -6.3333 -3.9490 22 1 -0.0295 -5.8453 -4.8800 23 6 -0.2510 -7.7759 -3.9495 24 8 -1.6608 -7.7827 -4.1829 25 6 1.7837 -6.3319 -3.8236 26 6 2.2940 -4.8900 -3.8223 27 1 -0.3634 0.5138 -0.8899 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3634 0.5138 0.8900 30 1 1.8933 -0.5138 0.8900 31 1 3.0229 3.7280 0.4008 32 1 3.2074 4.8440 2.5869 33 1 1.8742 4.8430 4.9770 34 1 4.3677 3.3937 5.3110 35 1 2.4757 1.5085 6.3437 36 1 1.8481 3.4634 7.6494 37 1 1.4180 1.4624 4.4725 38 1 1.2196 0.3443 2.2885 39 1 1.1488 -2.4721 -0.8053 40 1 1.8310 -2.1773 -3.5299 41 1 3.2847 -2.6911 -2.6405 42 1 -0.2748 -3.5960 -1.9238 43 1 -0.1289 -3.6474 -3.6970 44 1 -1.4372 -5.5783 -2.8556 45 1 -0.0625 -6.0654 -1.8357 46 1 0.2504 -8.3382 -4.7372 47 1 -0.0402 -8.2360 -2.9841 48 1 -2.0530 -8.6666 -4.1961 49 1 2.2180 -6.8708 -4.6655 50 1 2.0722 -6.8199 -2.8925 51 1 2.0056 -4.4024 -4.7535 52 1 3.3803 -4.8891 -3.7329 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14939082_10157680.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:59:16 Heat of formation + Delta-G solvation = -144.757322 kcal Electronic energy + Delta-G solvation = -30660.165867 eV Core-core repulsion = 26397.719047 eV Total energy + Delta-G solvation = -4262.446820 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.197 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -41.77551 -40.80372 -40.04874 -39.02400 -37.69185 -37.22689 -35.84805 -33.80600 -32.58867 -31.87293 -31.83380 -31.48583 -28.28683 -26.72201 -25.65649 -24.70665 -24.04842 -23.66823 -22.37578 -21.81447 -21.36370 -20.80715 -19.54616 -18.71720 -18.30406 -18.14405 -17.13361 -16.90456 -16.80734 -16.55254 -16.30828 -16.14334 -15.91340 -15.81331 -15.62730 -15.26668 -15.12778 -14.92181 -14.69481 -14.56288 -14.47825 -14.10922 -14.04236 -13.72224 -13.56456 -13.40774 -13.36529 -13.25366 -12.96164 -12.89908 -12.62556 -12.24291 -12.20089 -12.13495 -12.05431 -12.02399 -11.59633 -11.54930 -11.29534 -11.20001 -10.91231 -10.79376 -10.57802 -10.17806 -10.03226 -9.19882 -4.97922 0.29066 0.30291 1.28744 1.45424 1.54469 1.57787 1.95727 2.47499 2.66023 3.12398 3.37758 3.39622 3.47934 3.54728 3.58739 3.62938 3.67335 3.71764 3.82191 3.86764 3.94675 4.05099 4.16435 4.21067 4.28738 4.30431 4.33457 4.37269 4.41820 4.43308 4.49861 4.51702 4.55031 4.57126 4.64696 4.67330 4.73103 4.80588 4.89163 4.94454 4.95965 5.00522 5.06566 5.10213 5.15255 5.17365 5.26155 5.28602 5.33131 5.41882 5.50510 5.69446 6.23654 6.38736 6.41853 6.61696 7.09718 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.066 3.934 3 O -0.283 6.283 4 C 0.136 3.864 5 C -0.146 4.146 6 C -0.051 4.051 7 C -0.156 4.156 8 C -0.070 4.070 9 O -0.531 6.531 10 Si 0.682 3.318 11 C -0.075 4.075 12 C -0.209 4.209 13 C 0.517 3.483 14 O -0.512 6.512 15 N -0.725 5.725 16 C 0.124 3.876 17 C -0.099 4.099 18 H 0.078 0.922 19 C -0.116 4.116 20 C -0.110 4.110 21 C -0.089 4.089 22 H 0.078 0.922 23 C 0.078 3.922 24 O -0.574 6.574 25 C -0.112 4.112 26 C -0.110 4.110 27 H 0.077 0.923 28 H 0.079 0.921 29 H 0.080 0.920 30 H 0.101 0.899 31 H 0.135 0.865 32 H 0.134 0.866 33 H 0.118 0.882 34 H 0.376 0.624 35 H -0.261 1.261 36 H -0.257 1.257 37 H 0.130 0.870 38 H 0.133 0.867 39 H 0.401 0.599 40 H 0.072 0.928 41 H 0.071 0.929 42 H 0.062 0.938 43 H 0.067 0.933 44 H 0.071 0.929 45 H 0.060 0.940 46 H 0.045 0.955 47 H 0.045 0.955 48 H 0.380 0.620 49 H 0.067 0.933 50 H 0.065 0.935 51 H 0.069 0.931 52 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.832 -6.604 1.598 7.801 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C 0.006 3.994 3 O -0.196 6.196 4 C 0.091 3.909 5 C -0.165 4.165 6 C -0.069 4.069 7 C -0.157 4.157 8 C -0.180 4.180 9 O -0.337 6.337 10 Si 0.583 3.417 11 C -0.092 4.092 12 C -0.227 4.227 13 C 0.301 3.699 14 O -0.386 6.386 15 N -0.379 5.379 16 C 0.001 3.999 17 C -0.118 4.118 18 H 0.097 0.903 19 C -0.153 4.153 20 C -0.147 4.147 21 C -0.107 4.107 22 H 0.097 0.903 23 C 0.000 4.000 24 O -0.379 6.379 25 C -0.150 4.150 26 C -0.148 4.148 27 H 0.096 0.904 28 H 0.098 0.902 29 H 0.099 0.901 30 H 0.118 0.882 31 H 0.153 0.847 32 H 0.152 0.848 33 H 0.136 0.864 34 H 0.223 0.777 35 H -0.186 1.186 36 H -0.183 1.183 37 H 0.147 0.853 38 H 0.151 0.849 39 H 0.236 0.764 40 H 0.090 0.910 41 H 0.089 0.911 42 H 0.080 0.920 43 H 0.085 0.915 44 H 0.090 0.910 45 H 0.079 0.921 46 H 0.063 0.937 47 H 0.063 0.937 48 H 0.227 0.773 49 H 0.086 0.914 50 H 0.084 0.916 51 H 0.087 0.913 52 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -3.220 -5.268 1.532 6.362 hybrid contribution 0.781 -1.240 0.208 1.480 sum -2.439 -6.508 1.740 7.164 Atomic orbital electron populations 1.22369 0.92269 1.03900 1.04998 1.22197 0.95945 0.83244 0.98024 1.86231 1.80864 1.25430 1.27032 1.19094 0.95050 0.92806 0.83978 1.20545 1.03280 0.93611 0.99042 1.20856 0.95988 0.99569 0.90456 1.20190 1.03725 0.95607 0.96158 1.24955 0.86731 1.07371 0.98913 1.86599 1.18032 1.36224 1.92830 0.95127 0.91092 0.77536 0.77926 1.20782 0.97350 0.94061 0.97056 1.21204 1.07321 1.01824 0.92362 1.20072 0.80746 0.81996 0.87053 1.90783 1.36246 1.65616 1.45957 1.45871 1.54382 1.11516 1.26179 1.21482 0.99451 0.91626 0.87369 1.21443 0.96137 0.94108 1.00125 0.90315 1.21635 0.94179 0.97149 1.02374 1.21513 1.00929 0.94686 0.97619 1.21174 0.94827 0.94612 1.00120 0.90339 1.22244 0.81504 0.97029 0.99191 1.86473 1.21813 1.34075 1.95565 1.21492 0.94243 0.96844 1.02422 1.21460 1.00306 0.95086 0.97985 0.90392 0.90248 0.90148 0.88195 0.84671 0.84786 0.86438 0.77680 1.18611 1.18254 0.85296 0.84933 0.76404 0.91006 0.91091 0.91962 0.91458 0.91012 0.92139 0.93662 0.93693 0.77279 0.91421 0.91624 0.91273 0.91208 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.46 9.07 37.16 0.34 0.79 16 2 C 0.07 -0.01 2.65 -27.89 -0.07 -0.09 16 3 O -0.28 -0.88 9.33 -39.35 -0.37 -1.25 16 4 C 0.14 0.26 6.60 -39.22 -0.26 0.00 16 5 C -0.15 -0.28 9.99 -39.43 -0.39 -0.68 16 6 C -0.05 -0.05 9.60 -39.61 -0.38 -0.43 16 7 C -0.16 -0.05 5.39 -104.60 -0.56 -0.61 16 8 C -0.07 0.01 2.82 36.01 0.10 0.11 16 9 O -0.53 -0.76 12.77 -35.23 -0.45 -1.21 16 10 Si 0.68 -0.70 29.78 -169.99 -5.06 -5.77 16 11 C -0.07 0.04 8.66 -39.60 -0.34 -0.31 16 12 C -0.21 0.04 8.24 -39.43 -0.32 -0.28 16 13 C 0.52 0.95 7.23 -10.99 -0.08 0.87 16 14 O -0.51 -3.52 16.50 -14.36 -0.24 -3.76 16 15 N -0.72 1.08 5.18 -60.29 -0.31 0.77 16 16 C 0.12 -0.13 5.06 -4.05 -0.02 -0.15 16 17 C -0.10 0.28 2.23 -90.63 -0.20 0.08 16 18 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 19 C -0.12 0.29 5.08 -26.73 -0.14 0.15 16 20 C -0.11 0.18 5.10 -26.73 -0.14 0.04 16 21 C -0.09 0.12 2.43 -90.62 -0.22 -0.10 16 22 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 23 C 0.08 -0.11 6.43 37.16 0.24 0.13 16 24 O -0.57 0.01 13.20 -35.23 -0.46 -0.46 16 25 C -0.11 0.27 5.20 -26.76 -0.14 0.13 16 26 C -0.11 0.27 5.20 -26.76 -0.14 0.13 16 27 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 28 H 0.08 -0.40 7.56 -51.93 -0.39 -0.79 16 29 H 0.08 -0.24 6.90 -51.93 -0.36 -0.60 16 30 H 0.10 -0.25 6.31 -51.93 -0.33 -0.58 16 31 H 0.14 0.21 8.06 -52.48 -0.42 -0.21 16 32 H 0.13 0.04 8.06 -52.49 -0.42 -0.38 16 33 H 0.12 -0.10 7.96 -51.93 -0.41 -0.51 16 34 H 0.38 -0.48 8.70 45.56 0.40 -0.08 16 35 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 36 H -0.26 -0.62 7.11 56.52 0.40 -0.22 16 37 H 0.13 -0.32 4.87 -52.49 -0.26 -0.58 16 38 H 0.13 -0.36 5.43 -52.48 -0.28 -0.64 16 39 H 0.40 -1.76 7.07 -40.82 -0.29 -2.05 16 40 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 41 H 0.07 0.00 8.14 -51.92 -0.42 -0.42 16 42 H 0.06 -0.21 7.18 -51.93 -0.37 -0.58 16 43 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 44 H 0.07 -0.01 7.82 -51.93 -0.41 -0.42 16 45 H 0.06 -0.12 8.14 -51.93 -0.42 -0.54 16 46 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 47 H 0.04 -0.09 8.14 -51.93 -0.42 -0.52 16 48 H 0.38 -1.51 9.12 45.56 0.42 -1.10 16 49 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 50 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 51 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 52 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 LS Contribution 408.84 15.07 6.16 6.16 Total: 0.00 -9.85 408.84 -11.29 -21.14 By element: Atomic # 1 Polarization: -7.60 SS G_CDS: -7.83 Total: -15.43 kcal Atomic # 6 Polarization: 2.52 SS G_CDS: -2.73 Total: -0.21 kcal Atomic # 7 Polarization: 1.08 SS G_CDS: -0.31 Total: 0.77 kcal Atomic # 8 Polarization: -5.15 SS G_CDS: -1.52 Total: -6.67 kcal Atomic # 14 Polarization: -0.70 SS G_CDS: -5.06 Total: -5.77 kcal Total LS contribution 6.16 Total: 6.16 kcal Total: -9.85 -11.29 -21.14 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_10157680.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -123.613 kcal (2) G-P(sol) polarization free energy of solvation -9.849 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.463 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.295 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.144 kcal (6) G-S(sol) free energy of system = (1) + (5) -144.757 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds