Wall clock time and date at job start Sun Mar 7 2021 01:59:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.35528 * 125.68044 * 2 1 4 4 C 1.35447 * 108.87303 * 180.22868 * 3 2 1 5 5 C 1.50705 * 126.07165 * 179.72970 * 4 3 2 6 6 O 1.42899 * 109.47035 * 300.02489 * 5 4 3 7 7 Si 1.86294 * 109.47179 * 180.02562 * 5 4 3 8 8 C 1.39838 * 107.86281 * 359.76962 * 4 3 2 9 9 C 1.37649 * 125.67507 * 179.83127 * 2 1 3 10 10 C 1.46685 * 126.23263 * 0.03354 * 9 2 1 11 11 O 1.21693 * 120.00148 * 353.97087 * 10 9 2 12 12 N 1.34779 * 119.99822 * 173.69911 * 10 9 2 13 13 C 1.46498 * 120.00095 * 185.11304 * 12 10 9 14 14 C 1.52993 * 109.47241 * 180.02562 * 13 12 10 15 15 H 1.09000 * 109.47121 * 55.00145 * 14 13 12 16 16 C 1.52999 * 109.47254 * 175.00408 * 14 13 12 17 17 C 1.52993 * 109.47254 * 180.02562 * 16 14 13 18 18 C 1.53003 * 109.47239 * 299.99751 * 17 16 14 19 19 H 1.09000 * 109.47053 * 300.00027 * 18 17 16 20 20 C 1.53005 * 109.47131 * 180.02562 * 18 17 16 21 21 O 1.42897 * 109.46608 * 175.00194 * 20 18 17 22 22 C 1.52999 * 109.46794 * 59.99967 * 18 17 16 23 23 C 1.52993 * 109.47254 * 300.00023 * 22 18 17 24 24 H 1.09000 * 109.47230 * 274.11245 * 1 2 3 25 25 H 1.08997 * 109.47050 * 34.10962 * 1 2 3 26 26 H 1.08992 * 109.47602 * 154.10979 * 1 2 3 27 27 H 1.08002 * 125.56461 * 359.97438 * 3 2 1 28 28 H 1.09001 * 109.46566 * 60.01930 * 5 4 3 29 29 H 0.96704 * 114.00159 * 299.99654 * 6 5 4 30 30 H 1.48509 * 109.99828 * 180.02562 * 7 5 4 31 31 H 1.48500 * 109.99929 * 301.31490 * 7 5 4 32 32 H 1.08004 * 126.45485 * 179.97438 * 8 4 3 33 33 H 0.97003 * 120.00129 * 5.11724 * 12 10 9 34 34 H 1.09001 * 109.46838 * 300.00516 * 13 12 10 35 35 H 1.09001 * 109.46807 * 59.99932 * 13 12 10 36 36 H 1.09009 * 109.46592 * 299.99957 * 16 14 13 37 37 H 1.09000 * 109.47272 * 59.99829 * 16 14 13 38 38 H 1.09005 * 109.47570 * 59.99588 * 17 16 14 39 39 H 1.09008 * 109.47421 * 179.97438 * 17 16 14 40 40 H 1.08998 * 109.46579 * 294.99554 * 20 18 17 41 41 H 1.09001 * 109.47212 * 54.99578 * 20 18 17 42 42 H 0.96708 * 113.99604 * 180.02562 * 21 20 18 43 43 H 1.09000 * 109.47272 * 60.00194 * 22 18 17 44 44 H 1.09009 * 109.46592 * 180.02562 * 22 18 17 45 45 H 1.09000 * 109.47121 * 300.00263 * 23 22 18 46 46 H 1.08998 * 109.47434 * 180.02562 * 23 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2555 1.1009 0.0000 4 6 3.5521 0.7092 -0.0051 5 6 4.7538 1.6187 -0.0126 6 8 4.7213 2.4412 -1.1808 7 14 6.3089 0.5930 -0.0183 8 6 3.5779 -0.6889 -0.0031 9 6 2.2678 -1.1182 0.0033 10 6 1.8122 -2.5125 0.0067 11 8 0.6270 -2.7651 0.1175 12 7 2.7059 -3.5137 -0.1184 13 6 2.2430 -4.8993 -0.2276 14 6 3.4493 -5.8312 -0.3575 15 1 4.1288 -5.6647 0.4784 16 6 2.9739 -7.2855 -0.3463 17 6 4.1803 -8.2174 -0.4755 18 6 4.9090 -7.9292 -1.7897 19 1 4.2299 -8.0959 -2.6258 20 6 6.1152 -8.8617 -1.9191 21 8 6.7273 -8.6739 -3.1966 22 6 5.3845 -6.4750 -1.8008 23 6 4.1781 -5.5431 -1.6716 24 1 -0.3634 0.0737 1.0250 25 1 -0.3633 0.8509 -0.5763 26 1 -0.3634 -0.9244 -0.4487 27 1 1.9083 2.1235 -0.0004 28 1 4.7375 2.2494 0.8763 29 1 4.7333 1.9457 -2.0112 30 1 7.5012 1.4784 -0.0252 31 1 6.3394 -0.2899 1.1753 32 1 4.4583 -1.3146 -0.0064 33 1 3.6555 -3.3168 -0.1360 34 1 1.6742 -5.1637 0.6638 35 1 1.6078 -5.0018 -1.1075 36 1 2.4551 -7.4909 0.5901 37 1 2.2945 -7.4520 -1.1822 38 1 4.8595 -8.0508 0.3606 39 1 3.8417 -9.2536 -0.4671 40 1 6.8360 -8.6344 -1.1338 41 1 5.7865 -9.8965 -1.8222 42 1 7.5005 -9.2346 -3.3485 43 1 6.0635 -6.3083 -0.9647 44 1 5.9032 -6.2696 -2.7373 45 1 3.4990 -5.7098 -2.5078 46 1 4.5167 -4.5070 -1.6800 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14939082_10803934.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:59:21 Heat of formation + Delta-G solvation = -89.258831 kcal Electronic energy + Delta-G solvation = -25909.322962 eV Core-core repulsion = 22186.302778 eV Total energy + Delta-G solvation = -3723.020185 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.177 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -42.55462 -40.62885 -39.71474 -37.71300 -37.53491 -35.89061 -34.04000 -32.87325 -31.65798 -30.74703 -28.56903 -27.90567 -25.71653 -24.91906 -23.82568 -23.06560 -21.68121 -21.10904 -20.80672 -20.48097 -19.02541 -18.17077 -17.34366 -17.13186 -16.88788 -16.67374 -16.40981 -15.91969 -15.78900 -15.56087 -15.28522 -15.06121 -15.00678 -14.84312 -14.59811 -14.44588 -14.04517 -13.89871 -13.67701 -13.44035 -13.17694 -13.14844 -13.04211 -12.78696 -12.47528 -12.16361 -11.99843 -11.95774 -11.86774 -11.36330 -11.21480 -11.02777 -11.00157 -10.73675 -10.35959 -10.21328 -9.73439 -9.23631 -4.90315 0.39468 1.43478 1.54479 1.58772 1.78088 2.06455 2.26932 2.34280 3.34277 3.62903 3.65969 3.68930 3.78273 3.81293 3.91264 4.05777 4.13074 4.19793 4.23045 4.31709 4.34343 4.39681 4.49271 4.53072 4.54444 4.63834 4.66067 4.66504 4.70414 4.73145 4.74016 4.80325 4.84142 5.00130 5.11697 5.13361 5.20557 5.26053 5.28444 5.33971 5.39981 5.50849 5.60442 5.67709 5.90826 6.14973 6.45901 6.89826 6.91800 7.10604 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.063 3.937 2 N -0.416 5.416 3 C 0.046 3.954 4 C -0.217 4.217 5 C -0.039 4.039 6 O -0.561 6.561 7 Si 0.780 3.220 8 C -0.127 4.127 9 C -0.073 4.073 10 C 0.585 3.415 11 O -0.586 6.586 12 N -0.704 5.704 13 C 0.129 3.871 14 C -0.089 4.089 15 H 0.090 0.910 16 C -0.110 4.110 17 C -0.108 4.108 18 C -0.090 4.090 19 H 0.061 0.939 20 C 0.075 3.925 21 O -0.595 6.595 22 C -0.106 4.106 23 C -0.114 4.114 24 H 0.079 0.921 25 H 0.107 0.893 26 H 0.087 0.913 27 H 0.186 0.814 28 H 0.101 0.899 29 H 0.393 0.607 30 H -0.305 1.305 31 H -0.282 1.282 32 H 0.171 0.829 33 H 0.415 0.585 34 H 0.061 0.939 35 H 0.060 0.940 36 H 0.072 0.928 37 H 0.062 0.938 38 H 0.073 0.927 39 H 0.068 0.932 40 H 0.054 0.946 41 H 0.049 0.951 42 H 0.394 0.606 43 H 0.069 0.931 44 H 0.057 0.943 45 H 0.055 0.945 46 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.003 -3.023 -0.873 4.349 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 N -0.088 5.088 3 C -0.091 4.091 4 C -0.223 4.223 5 C -0.149 4.149 6 O -0.369 6.369 7 Si 0.687 3.313 8 C -0.153 4.153 9 C -0.186 4.186 10 C 0.374 3.626 11 O -0.469 6.469 12 N -0.356 5.356 13 C 0.006 3.994 14 C -0.107 4.107 15 H 0.108 0.892 16 C -0.148 4.148 17 C -0.145 4.145 18 C -0.109 4.109 19 H 0.080 0.920 20 C -0.002 4.002 21 O -0.403 6.403 22 C -0.143 4.143 23 C -0.151 4.151 24 H 0.098 0.902 25 H 0.125 0.875 26 H 0.106 0.894 27 H 0.203 0.797 28 H 0.119 0.881 29 H 0.243 0.757 30 H -0.233 1.233 31 H -0.209 1.209 32 H 0.188 0.812 33 H 0.253 0.747 34 H 0.080 0.920 35 H 0.078 0.922 36 H 0.091 0.909 37 H 0.080 0.920 38 H 0.092 0.908 39 H 0.087 0.913 40 H 0.073 0.927 41 H 0.067 0.933 42 H 0.244 0.756 43 H 0.087 0.913 44 H 0.076 0.924 45 H 0.074 0.926 46 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 1.994 -2.587 -0.021 3.266 hybrid contribution 0.105 0.024 0.445 0.458 sum 2.099 -2.563 0.424 3.340 Atomic orbital electron populations 1.22372 0.75236 1.05726 1.04384 1.44093 1.07537 1.05053 1.52118 1.22245 0.90105 0.92110 1.04597 1.19876 0.94694 0.94015 1.13729 1.24482 1.03259 0.96815 0.90392 1.86437 1.97196 1.36788 1.16435 0.93758 0.72431 0.79086 0.86042 1.21449 0.94704 0.94718 1.04394 1.20048 0.90948 0.87497 1.20128 1.17189 0.85308 0.84302 0.75849 1.90781 1.18032 1.85407 1.52631 1.45565 1.10280 1.06088 1.73629 1.21438 0.97161 0.79222 1.01601 1.21358 0.95643 0.94378 0.99351 0.89161 1.21469 0.97719 0.93045 1.02603 1.21463 0.96941 0.99608 0.96500 1.21185 0.95879 0.95432 0.98381 0.92037 1.22318 0.94742 0.98364 0.84805 1.86434 1.49417 1.68079 1.36418 1.21461 0.97393 0.93433 1.02033 1.21613 0.96971 0.99953 0.96568 0.90228 0.87463 0.89442 0.79669 0.88135 0.75691 1.23342 1.20875 0.81197 0.74690 0.92029 0.92179 0.90909 0.91952 0.90845 0.91302 0.92745 0.93270 0.75615 0.91263 0.92434 0.92592 0.90599 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.04 10.63 127.77 1.36 1.40 16 2 N -0.42 -1.34 3.16 -534.33 -1.69 -3.03 16 3 C 0.05 0.05 11.29 83.48 0.94 0.99 16 4 C -0.22 -0.06 5.41 -20.12 -0.11 -0.16 16 5 C -0.04 0.03 3.00 71.24 0.21 0.24 16 6 O -0.56 0.02 12.88 -148.98 -1.92 -1.90 16 7 Si 0.78 -2.11 30.64 68.60 2.10 -0.01 16 8 C -0.13 0.07 8.84 22.57 0.20 0.27 16 9 C -0.07 -0.29 6.88 40.35 0.28 -0.01 16 10 C 0.58 3.46 7.77 86.45 0.67 4.14 16 11 O -0.59 -7.60 14.67 -4.33 -0.06 -7.66 16 12 N -0.70 0.56 5.27 -467.08 -2.46 -1.90 16 13 C 0.13 -0.14 5.07 86.38 0.44 0.30 16 14 C -0.09 0.46 2.22 -10.80 -0.02 0.44 16 15 H 0.09 -0.61 8.14 -2.39 -0.02 -0.63 16 16 C -0.11 0.51 5.20 30.59 0.16 0.67 16 17 C -0.11 0.53 5.20 30.59 0.16 0.69 16 18 C -0.09 0.22 2.43 -10.79 -0.03 0.19 16 19 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 20 C 0.08 -0.20 6.43 71.98 0.46 0.26 16 21 O -0.60 -0.14 13.20 -148.98 -1.97 -2.10 16 22 C -0.11 0.33 5.10 30.59 0.16 0.49 16 23 C -0.11 0.52 5.08 30.59 0.16 0.68 16 24 H 0.08 0.00 8.14 -2.39 -0.02 -0.02 16 25 H 0.11 -0.49 8.14 -2.39 -0.02 -0.51 16 26 H 0.09 0.42 6.23 -2.39 -0.01 0.40 16 27 H 0.19 -0.51 8.06 -2.91 -0.02 -0.53 16 28 H 0.10 0.06 7.96 -2.39 -0.02 0.04 16 29 H 0.39 -2.99 8.70 -74.05 -0.64 -3.64 16 30 H -0.31 -1.60 7.11 99.48 0.71 -0.89 16 31 H -0.28 -0.40 7.11 99.48 0.71 0.30 16 32 H 0.17 -1.12 5.77 -2.91 -0.02 -1.14 16 33 H 0.42 -2.60 6.56 -92.71 -0.61 -3.21 16 34 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 35 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 36 H 0.07 -0.37 8.14 -2.38 -0.02 -0.39 16 37 H 0.06 -0.20 8.14 -2.39 -0.02 -0.22 16 38 H 0.07 -0.45 8.14 -2.38 -0.02 -0.47 16 39 H 0.07 -0.35 8.14 -2.38 -0.02 -0.37 16 40 H 0.05 -0.25 8.14 -2.39 -0.02 -0.27 16 41 H 0.05 -0.19 8.14 -2.39 -0.02 -0.21 16 42 H 0.39 -3.06 9.12 -74.05 -0.68 -3.74 16 43 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 44 H 0.06 0.01 7.82 -2.38 -0.02 -0.01 16 45 H 0.06 -0.11 8.14 -2.39 -0.02 -0.13 16 46 H 0.08 -0.52 7.18 -2.39 -0.02 -0.53 16 Total: 0.00 -20.49 365.98 -1.86 -22.35 By element: Atomic # 1 Polarization: -15.42 SS G_CDS: -0.90 Total: -16.31 kcal Atomic # 6 Polarization: 5.54 SS G_CDS: 5.03 Total: 10.58 kcal Atomic # 7 Polarization: -0.78 SS G_CDS: -4.15 Total: -4.94 kcal Atomic # 8 Polarization: -7.72 SS G_CDS: -3.95 Total: -11.67 kcal Atomic # 14 Polarization: -2.11 SS G_CDS: 2.10 Total: -0.01 kcal Total: -20.49 -1.86 -22.35 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_10803934.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.913 kcal (2) G-P(sol) polarization free energy of solvation -20.488 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.401 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.858 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.346 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.259 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds