Wall clock time and date at job start Sun Mar 7 2021 02:01:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.38981 * 119.95642 * 2 1 4 4 O 1.35714 * 119.90939 * 0.02562 * 3 2 1 5 5 C 1.39017 * 120.17409 * 180.26951 * 3 2 1 6 6 C 1.50705 * 119.95373 * 179.72145 * 5 3 2 7 7 O 1.42894 * 109.47171 * 284.73303 * 6 5 3 8 8 Si 1.86298 * 109.46780 * 164.72744 * 6 5 3 9 9 C 1.37674 * 120.09047 * 359.45592 * 5 3 2 10 10 C 1.39755 * 119.91073 * 0.27032 * 9 5 3 11 11 C 1.47608 * 120.08930 * 180.02562 * 10 9 5 12 12 O 1.21582 * 119.99911 * 359.97438 * 11 10 9 13 13 N 1.34779 * 120.00091 * 179.97438 * 11 10 9 14 14 C 1.46494 * 120.00117 * 180.02562 * 13 11 10 15 15 C 1.52995 * 109.47323 * 180.02562 * 14 13 11 16 16 H 1.08998 * 109.47473 * 54.99591 * 15 14 13 17 17 C 1.53002 * 109.47211 * 175.00056 * 15 14 13 18 18 C 1.53003 * 109.46880 * 179.97438 * 17 15 14 19 19 C 1.52995 * 109.47049 * 299.99834 * 18 17 15 20 20 H 1.08997 * 109.47339 * 299.99786 * 19 18 17 21 21 C 1.53005 * 109.46712 * 180.02562 * 19 18 17 22 22 O 1.42898 * 109.46874 * 174.99787 * 21 19 18 23 23 C 1.52995 * 109.47587 * 60.00354 * 19 18 17 24 24 C 1.53001 * 109.46938 * 294.99827 * 15 14 13 25 25 C 1.37719 * 119.95479 * 179.72005 * 2 1 3 26 26 H 1.09000 * 109.47437 * 270.27770 * 1 2 3 27 27 H 1.09003 * 109.46831 * 30.27066 * 1 2 3 28 28 H 1.09002 * 109.47450 * 150.27084 * 1 2 3 29 29 H 0.96695 * 113.99477 * 270.24669 * 4 3 2 30 30 H 1.09004 * 109.46779 * 44.73626 * 6 5 3 31 31 H 0.96709 * 113.99337 * 180.02562 * 7 6 5 32 32 H 1.48506 * 109.99834 * 60.00830 * 8 6 5 33 33 H 1.48502 * 110.00011 * 181.32094 * 8 6 5 34 34 H 1.08004 * 120.04963 * 180.29128 * 9 5 3 35 35 H 0.97000 * 119.99686 * 0.02562 * 13 11 10 36 36 H 1.09006 * 109.46764 * 300.00106 * 14 13 11 37 37 H 1.09003 * 109.47159 * 59.99522 * 14 13 11 38 38 H 1.08995 * 109.46670 * 299.99431 * 17 15 14 39 39 H 1.09000 * 109.46798 * 59.99611 * 17 15 14 40 40 H 1.08997 * 109.46875 * 59.99904 * 18 17 15 41 41 H 1.09003 * 109.46502 * 179.97438 * 18 17 15 42 42 H 1.08994 * 109.47323 * 295.00050 * 21 19 18 43 43 H 1.08997 * 109.47422 * 55.00219 * 21 19 18 44 44 H 0.96703 * 113.99946 * 179.97438 * 22 21 19 45 45 H 1.09006 * 109.47372 * 59.99302 * 23 19 18 46 46 H 1.08992 * 109.47476 * 179.97438 * 23 19 18 47 47 H 1.09000 * 109.47246 * 300.00495 * 24 15 14 48 48 H 1.09000 * 109.47213 * 59.99604 * 24 15 14 49 49 H 1.07998 * 120.04806 * 0.03430 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2041 0.0000 4 8 1.5197 2.3779 0.0005 5 6 3.5911 1.2094 -0.0057 6 6 4.3386 2.5180 -0.0120 7 8 4.2721 3.0983 -1.3161 8 14 6.1197 2.2179 0.4442 9 6 4.2859 0.0209 0.0000 10 6 3.5918 -1.1921 0.0058 11 6 4.3328 -2.4687 0.0125 12 8 5.5486 -2.4659 0.0125 13 7 3.6616 -3.6375 0.0185 14 6 4.3969 -4.9044 0.0257 15 6 3.4054 -6.0696 0.0310 16 1 2.7217 -5.9687 -0.8118 17 6 4.1694 -7.3900 -0.0872 18 6 3.1778 -8.5552 -0.0813 19 6 2.3826 -8.5414 1.2257 20 1 3.0665 -8.6421 2.0683 21 6 1.3914 -9.7070 1.2318 22 8 0.7313 -9.7643 2.4979 23 6 1.6186 -7.2211 1.3440 24 6 2.6096 -6.0561 1.3377 25 6 2.1946 -1.1932 0.0058 26 1 -0.3634 0.0050 1.0276 27 1 -0.3633 0.8876 -0.5181 28 1 -0.3634 -0.8924 -0.5096 29 1 1.3186 2.7162 -0.8827 30 1 3.8878 3.1974 0.7115 31 1 4.7334 3.9447 -1.3939 32 1 6.7458 1.2930 -0.5346 33 1 6.8605 3.5046 0.4727 34 1 5.3660 0.0258 0.0004 35 1 2.6916 -3.6396 0.0181 36 1 5.0241 -4.9655 -0.8637 37 1 5.0234 -4.9559 0.9163 38 1 4.7363 -7.3995 -1.0181 39 1 4.8531 -7.4908 0.7557 40 1 2.4939 -8.4544 -0.9239 41 1 3.7222 -9.4958 -0.1660 42 1 0.6532 -9.5604 0.4434 43 1 1.9271 -10.6404 1.0588 44 1 0.0867 -10.4811 2.5733 45 1 0.9345 -7.1203 0.5012 46 1 1.0516 -7.2115 2.2748 47 1 3.2934 -6.1569 2.1806 48 1 2.0654 -5.1155 1.4220 49 1 1.6547 -2.1285 0.0098 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14939082_13287732.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:01:13 Heat of formation + Delta-G solvation = -154.610672 kcal Electronic energy + Delta-G solvation = -29267.596105 eV Core-core repulsion = 25160.259631 eV Total energy + Delta-G solvation = -4107.336475 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.182 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -41.64706 -40.63264 -39.84389 -37.86740 -37.72996 -37.43212 -35.80942 -34.12172 -33.07766 -31.82584 -31.64620 -28.27320 -28.04180 -26.78986 -25.29502 -24.14595 -23.55543 -22.00881 -21.70020 -21.31718 -20.76533 -19.48491 -18.64681 -18.48772 -18.26359 -17.74789 -16.71971 -16.61876 -16.46871 -16.14435 -15.99027 -15.83437 -15.40108 -15.26670 -15.09398 -14.87563 -14.77290 -14.52165 -14.34983 -13.97839 -13.97634 -13.66317 -13.51548 -13.48894 -13.20357 -13.04552 -12.94609 -12.82260 -12.64923 -12.53258 -12.15499 -11.98069 -11.74109 -11.50553 -11.47861 -11.26383 -11.15266 -10.91184 -10.85334 -10.48574 -10.11357 -9.94356 -9.61299 -4.92587 -0.32887 0.10990 1.27199 1.61479 1.71610 1.98269 2.11533 2.62343 3.10795 3.15899 3.23318 3.52815 3.57215 3.63171 3.65095 3.67520 3.76537 3.96764 4.01691 4.10182 4.18645 4.21087 4.30823 4.34762 4.38556 4.41658 4.42921 4.48125 4.55458 4.56710 4.61478 4.64269 4.68315 4.70411 4.79942 4.85789 4.98871 5.01856 5.05762 5.11400 5.12193 5.14278 5.16056 5.21181 5.30069 5.35977 5.39563 5.47172 5.56620 6.38216 6.46229 6.57589 6.64668 7.21908 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.109 4.109 2 C -0.117 4.117 3 C 0.159 3.841 4 O -0.489 6.489 5 C -0.102 4.102 6 C -0.068 4.068 7 O -0.538 6.538 8 Si 0.681 3.319 9 C -0.048 4.048 10 C -0.138 4.138 11 C 0.560 3.440 12 O -0.532 6.532 13 N -0.725 5.725 14 C 0.123 3.877 15 C -0.100 4.100 16 H 0.078 0.922 17 C -0.110 4.110 18 C -0.112 4.112 19 C -0.089 4.089 20 H 0.078 0.922 21 C 0.078 3.922 22 O -0.574 6.574 23 C -0.110 4.110 24 C -0.116 4.116 25 C -0.066 4.066 26 H 0.076 0.924 27 H 0.071 0.929 28 H 0.069 0.931 29 H 0.397 0.603 30 H 0.083 0.917 31 H 0.382 0.618 32 H -0.250 1.250 33 H -0.257 1.257 34 H 0.145 0.855 35 H 0.400 0.600 36 H 0.071 0.929 37 H 0.072 0.928 38 H 0.069 0.931 39 H 0.069 0.931 40 H 0.065 0.935 41 H 0.067 0.933 42 H 0.045 0.955 43 H 0.045 0.955 44 H 0.380 0.620 45 H 0.060 0.940 46 H 0.071 0.929 47 H 0.067 0.933 48 H 0.062 0.938 49 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.568 -2.151 -0.211 5.054 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C -0.118 4.118 3 C 0.113 3.887 4 O -0.300 6.300 5 C -0.103 4.103 6 C -0.178 4.178 7 O -0.346 6.346 8 Si 0.582 3.418 9 C -0.067 4.067 10 C -0.141 4.141 11 C 0.348 3.652 12 O -0.410 6.410 13 N -0.378 5.378 14 C -0.001 4.001 15 C -0.119 4.119 16 H 0.096 0.904 17 C -0.148 4.148 18 C -0.150 4.150 19 C -0.107 4.107 20 H 0.097 0.903 21 C 0.000 4.000 22 O -0.379 6.379 23 C -0.147 4.147 24 C -0.153 4.153 25 C -0.085 4.085 26 H 0.095 0.905 27 H 0.089 0.911 28 H 0.088 0.912 29 H 0.255 0.745 30 H 0.101 0.899 31 H 0.230 0.770 32 H -0.174 1.174 33 H -0.182 1.182 34 H 0.162 0.838 35 H 0.235 0.765 36 H 0.089 0.911 37 H 0.090 0.910 38 H 0.088 0.912 39 H 0.087 0.913 40 H 0.084 0.916 41 H 0.085 0.915 42 H 0.063 0.937 43 H 0.063 0.937 44 H 0.227 0.773 45 H 0.078 0.922 46 H 0.090 0.910 47 H 0.086 0.914 48 H 0.080 0.920 49 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -2.769 -2.174 0.136 3.523 hybrid contribution -1.092 0.455 -1.442 1.865 sum -3.861 -1.719 -1.305 4.424 Atomic orbital electron populations 1.20689 0.89677 1.03114 1.03108 1.20171 0.97269 0.92013 1.02352 1.18285 0.88758 0.85284 0.96353 1.84684 1.75664 1.35792 1.33884 1.19485 0.93025 0.93850 1.03919 1.24632 1.10725 0.94391 0.88050 1.86528 1.77681 1.40770 1.29582 0.94758 0.74345 0.82229 0.90491 1.21086 1.00846 0.90114 0.94618 1.19792 0.93438 0.93385 1.07480 1.18119 0.87212 0.83562 0.76347 1.90813 1.13315 1.87537 1.49321 1.45907 1.10417 1.05677 1.75768 1.21475 0.94389 0.81337 1.02860 1.21447 0.97169 0.94218 0.99045 0.90378 1.21468 0.97693 0.92915 1.02721 1.21501 0.97940 0.98642 0.96920 1.21171 0.96626 0.94223 0.98684 0.90343 1.22245 0.94636 0.97846 0.85240 1.86474 1.59360 1.56825 1.35255 1.21505 0.97486 0.93254 1.02502 1.21626 0.98178 0.98414 0.97131 1.21081 0.92574 0.97769 0.97064 0.90492 0.91054 0.91227 0.74478 0.89933 0.77000 1.17433 1.18192 0.83769 0.76463 0.91113 0.90969 0.91229 0.91271 0.91640 0.91455 0.93704 0.93679 0.77305 0.92165 0.91017 0.91433 0.91979 0.85057 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.19 9.78 36.00 0.35 0.55 16 2 C -0.12 -0.02 5.89 -104.54 -0.62 -0.64 16 3 C 0.16 0.22 6.66 -39.02 -0.26 -0.04 16 4 O -0.49 -0.20 11.84 -18.85 -0.22 -0.42 16 5 C -0.10 -0.21 5.30 -104.54 -0.55 -0.76 16 6 C -0.07 -0.06 2.37 36.01 0.09 0.03 16 7 O -0.54 -0.57 12.86 -35.23 -0.45 -1.02 16 8 Si 0.68 0.46 30.19 -169.99 -5.13 -4.68 16 9 C -0.05 -0.13 8.20 -39.22 -0.32 -0.46 16 10 C -0.14 -0.28 5.88 -104.95 -0.62 -0.90 16 11 C 0.56 1.72 7.76 -12.44 -0.10 1.63 16 12 O -0.53 -3.64 16.34 5.29 0.09 -3.55 16 13 N -0.72 0.06 5.23 -61.33 -0.32 -0.26 16 14 C 0.12 -0.04 5.06 -4.05 -0.02 -0.06 16 15 C -0.10 0.21 2.23 -90.62 -0.20 0.01 16 16 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 17 C -0.11 0.22 5.20 -26.73 -0.14 0.08 16 18 C -0.11 0.23 5.20 -26.73 -0.14 0.09 16 19 C -0.09 0.09 2.43 -90.62 -0.22 -0.13 16 20 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 21 C 0.08 -0.08 6.43 37.16 0.24 0.16 16 22 O -0.57 -0.16 13.19 -35.23 -0.46 -0.63 16 23 C -0.11 0.12 5.10 -26.76 -0.14 -0.02 16 24 C -0.12 0.20 5.07 -26.75 -0.14 0.07 16 25 C -0.07 0.01 9.18 -39.22 -0.36 -0.35 16 26 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 27 H 0.07 -0.14 7.53 -51.93 -0.39 -0.53 16 28 H 0.07 -0.21 8.08 -51.93 -0.42 -0.63 16 29 H 0.40 -1.11 9.06 45.56 0.41 -0.70 16 30 H 0.08 -0.01 7.81 -51.93 -0.41 -0.42 16 31 H 0.38 -1.03 8.74 45.56 0.40 -0.64 16 32 H -0.25 -1.02 6.75 56.52 0.38 -0.64 16 33 H -0.26 -0.53 7.11 56.52 0.40 -0.13 16 34 H 0.15 0.49 4.47 -52.48 -0.23 0.25 16 35 H 0.40 -1.03 5.67 -40.82 -0.23 -1.26 16 36 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 37 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 38 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 39 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 40 H 0.06 -0.15 8.14 -51.93 -0.42 -0.57 16 41 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 42 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 43 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 44 H 0.38 -1.41 9.12 45.56 0.42 -0.99 16 45 H 0.06 -0.08 8.14 -51.93 -0.42 -0.51 16 46 H 0.07 0.03 7.82 -51.93 -0.41 -0.38 16 47 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 48 H 0.06 -0.15 7.18 -51.93 -0.37 -0.52 16 49 H 0.13 -0.41 6.39 -52.49 -0.34 -0.75 16 LS Contribution 388.99 15.07 5.86 5.86 Total: 0.00 -9.26 388.99 -10.07 -19.33 By element: Atomic # 1 Polarization: -7.61 SS G_CDS: -6.28 Total: -13.90 kcal Atomic # 6 Polarization: 2.40 SS G_CDS: -3.14 Total: -0.74 kcal Atomic # 7 Polarization: 0.06 SS G_CDS: -0.32 Total: -0.26 kcal Atomic # 8 Polarization: -4.57 SS G_CDS: -1.05 Total: -5.62 kcal Atomic # 14 Polarization: 0.46 SS G_CDS: -5.13 Total: -4.68 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -9.26 -10.07 -19.33 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_13287732.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -135.277 kcal (2) G-P(sol) polarization free energy of solvation -9.262 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -144.540 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.071 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.333 kcal (6) G-S(sol) free energy of system = (1) + (5) -154.611 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds