Wall clock time and date at job start Sun Mar 7 2021 02:01:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86298 * 109.46858 * 2 1 4 4 C 1.50693 * 109.47661 * 239.99225 * 2 1 3 5 5 C 1.38512 * 119.80211 * 119.72412 * 4 2 1 6 6 C 1.37825 * 120.29526 * 179.76412 * 5 4 2 7 7 C 1.39675 * 119.91220 * 0.53945 * 6 5 4 8 8 C 1.47536 * 120.19421 * 179.74264 * 7 6 5 9 9 O 1.21587 * 119.99870 * 179.97438 * 8 7 6 10 10 N 1.34779 * 119.99767 * 359.97438 * 8 7 6 11 11 C 1.46496 * 119.99922 * 179.97438 * 10 8 7 12 12 C 1.52998 * 109.47542 * 180.02562 * 11 10 8 13 13 H 1.09001 * 109.46568 * 305.00055 * 12 11 10 14 14 C 1.52998 * 109.47194 * 64.99432 * 12 11 10 15 15 C 1.52998 * 109.47194 * 180.02562 * 14 12 11 16 16 C 1.53000 * 109.47683 * 300.00684 * 15 14 12 17 17 H 1.09001 * 109.46645 * 300.00280 * 16 15 14 18 18 C 1.52995 * 109.47300 * 179.97438 * 16 15 14 19 19 O 1.42899 * 109.47075 * 65.00122 * 18 16 15 20 20 C 1.53002 * 109.46892 * 59.99626 * 16 15 14 21 21 C 1.52998 * 109.47500 * 185.00450 * 12 11 10 22 22 C 1.40177 * 119.61122 * 359.71839 * 7 6 5 23 23 O 1.35654 * 120.14461 * 179.97438 * 22 7 6 24 24 C 1.38100 * 119.80637 * 300.00577 * 4 2 1 25 25 H 0.96697 * 114.00527 * 300.00583 * 1 2 3 26 26 H 1.09000 * 109.46638 * 119.99419 * 2 1 3 27 27 H 1.48506 * 109.99834 * 178.67912 * 3 2 1 28 28 H 1.48502 * 110.00011 * 299.99177 * 3 2 1 29 29 H 1.07994 * 119.85073 * 0.02636 * 5 4 2 30 30 H 1.08004 * 120.04468 * 180.26027 * 6 5 4 31 31 H 0.97003 * 119.99953 * 0.02562 * 10 8 7 32 32 H 1.09008 * 109.47168 * 299.99954 * 11 10 8 33 33 H 1.09002 * 109.46927 * 59.99732 * 11 10 8 34 34 H 1.08995 * 109.47719 * 300.00748 * 14 12 11 35 35 H 1.09001 * 109.46855 * 60.00798 * 14 12 11 36 36 H 1.08997 * 109.47397 * 180.02562 * 15 14 12 37 37 H 1.09001 * 109.46568 * 60.00622 * 15 14 12 38 38 H 1.09006 * 109.46998 * 184.99834 * 18 16 15 39 39 H 1.08990 * 109.47288 * 305.00097 * 18 16 15 40 40 H 0.96695 * 114.00516 * 180.02562 * 19 18 16 41 41 H 1.09006 * 109.46839 * 180.02562 * 20 16 15 42 42 H 1.09001 * 109.47259 * 60.00123 * 20 16 15 43 43 H 1.09007 * 109.46496 * 299.99586 * 21 12 11 44 44 H 1.08997 * 109.47375 * 59.99277 * 21 12 11 45 45 H 0.96698 * 114.00262 * 270.02574 * 23 22 7 46 46 H 1.08002 * 119.95747 * 359.97232 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9315 -0.7105 -1.2303 5 6 2.7229 -0.0319 -2.1422 6 6 3.1920 -0.6732 -3.2684 7 6 2.8593 -2.0101 -3.4980 8 6 3.3534 -2.7010 -4.7044 9 8 3.0620 -3.8651 -4.9005 10 7 4.1276 -2.0418 -5.5890 11 6 4.6187 -2.7280 -6.7865 12 6 5.4679 -1.7624 -7.6156 13 1 4.8883 -0.8658 -7.8353 14 6 6.7211 -1.3788 -6.8263 15 6 7.5700 -0.4127 -7.6551 16 6 7.9793 -1.0885 -8.9653 17 1 8.5591 -1.9851 -8.7459 18 6 8.8277 -0.1221 -9.7943 19 8 10.0523 0.1454 -9.1083 20 6 6.7260 -1.4720 -9.7546 21 6 5.8771 -2.4387 -8.9255 22 6 2.0538 -2.6918 -2.5753 23 8 1.7237 -3.9903 -2.7878 24 6 1.5954 -2.0327 -1.4447 25 1 -0.3934 0.4417 0.7649 26 1 1.7923 -0.5138 0.8901 27 1 3.5346 1.7703 0.0322 28 1 1.5616 2.4678 -1.2086 29 1 2.9770 1.0032 -1.9679 30 1 3.8122 -0.1413 -3.9747 31 1 4.3604 -1.1133 -5.4323 32 1 5.2259 -3.5839 -6.4916 33 1 3.7722 -3.0708 -7.3816 34 1 6.4296 -0.8969 -5.8931 35 1 7.3007 -2.2754 -6.6066 36 1 8.4631 -0.1397 -7.0930 37 1 6.9902 0.4839 -7.8744 38 1 9.0448 -0.5696 -10.7643 39 1 8.2809 0.8097 -9.9382 40 1 10.6411 0.7527 -9.5768 41 1 7.0176 -1.9538 -10.6878 42 1 6.1462 -0.5754 -9.9738 43 1 6.4567 -3.3354 -8.7057 44 1 4.9842 -2.7120 -9.4878 45 1 0.9067 -4.1112 -3.2908 46 1 0.9745 -2.5539 -0.7311 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14939082_13422076.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:01:30 Heat of formation + Delta-G solvation = -147.054416 kcal Electronic energy + Delta-G solvation = -27163.763379 eV Core-core repulsion = 23212.292187 eV Total energy + Delta-G solvation = -3951.471192 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -41.61570 -40.46740 -39.58515 -38.36317 -37.61916 -37.22743 -35.69933 -33.46229 -32.30809 -31.81966 -31.14546 -28.54400 -27.16940 -24.87262 -23.93373 -23.86273 -23.06185 -21.75710 -21.46960 -20.83498 -19.32653 -18.67710 -18.53227 -18.27436 -17.58080 -16.73475 -16.68312 -16.40204 -16.22260 -16.00825 -15.88211 -15.48091 -15.32620 -15.14040 -14.96914 -14.77660 -14.41996 -14.17967 -13.99361 -13.93884 -13.51862 -13.31402 -13.21436 -12.93755 -12.86545 -12.60549 -12.51167 -12.17077 -12.11314 -11.99535 -11.74395 -11.51552 -11.25960 -11.16440 -10.88563 -10.73301 -10.52629 -10.13775 -9.99918 -9.77761 -5.07323 -0.40382 0.08915 1.14144 1.53010 1.78728 1.85099 2.11133 2.57291 3.10754 3.14844 3.19002 3.50600 3.54884 3.61038 3.65115 3.66924 3.70885 3.97352 4.01310 4.09969 4.18347 4.19755 4.20774 4.33488 4.37440 4.40637 4.46558 4.52665 4.55872 4.60279 4.68288 4.69602 4.77858 4.84094 4.92362 4.97471 5.04198 5.10090 5.11413 5.14475 5.18950 5.19993 5.34944 5.39775 5.46792 5.50757 6.46282 6.48417 6.63825 6.71869 7.24660 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.079 4.079 3 Si 0.688 3.312 4 C -0.031 4.031 5 C -0.143 4.143 6 C -0.063 4.063 7 C -0.165 4.165 8 C 0.558 3.442 9 O -0.517 6.517 10 N -0.728 5.728 11 C 0.124 3.876 12 C -0.100 4.100 13 H 0.078 0.922 14 C -0.116 4.116 15 C -0.110 4.110 16 C -0.089 4.089 17 H 0.078 0.922 18 C 0.078 3.922 19 O -0.574 6.574 20 C -0.112 4.112 21 C -0.110 4.110 22 C 0.175 3.825 23 O -0.475 6.475 24 C -0.125 4.125 25 H 0.385 0.615 26 H 0.081 0.919 27 H -0.253 1.253 28 H -0.249 1.249 29 H 0.127 0.873 30 H 0.133 0.867 31 H 0.398 0.602 32 H 0.071 0.929 33 H 0.070 0.930 34 H 0.060 0.940 35 H 0.067 0.933 36 H 0.071 0.929 37 H 0.060 0.940 38 H 0.045 0.955 39 H 0.045 0.955 40 H 0.380 0.620 41 H 0.067 0.933 42 H 0.065 0.935 43 H 0.069 0.931 44 H 0.069 0.931 45 H 0.399 0.601 46 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.393 6.277 0.549 6.313 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.189 4.189 3 Si 0.588 3.412 4 C -0.032 4.032 5 C -0.161 4.161 6 C -0.082 4.082 7 C -0.168 4.168 8 C 0.345 3.655 9 O -0.393 6.393 10 N -0.381 5.381 11 C 0.001 3.999 12 C -0.119 4.119 13 H 0.096 0.904 14 C -0.154 4.154 15 C -0.147 4.147 16 C -0.107 4.107 17 H 0.097 0.903 18 C 0.000 4.000 19 O -0.379 6.379 20 C -0.150 4.150 21 C -0.148 4.148 22 C 0.128 3.872 23 O -0.286 6.286 24 C -0.143 4.143 25 H 0.233 0.767 26 H 0.098 0.902 27 H -0.178 1.178 28 H -0.173 1.173 29 H 0.144 0.856 30 H 0.151 0.849 31 H 0.234 0.766 32 H 0.089 0.911 33 H 0.089 0.911 34 H 0.079 0.921 35 H 0.086 0.914 36 H 0.090 0.910 37 H 0.078 0.922 38 H 0.064 0.936 39 H 0.063 0.937 40 H 0.227 0.773 41 H 0.086 0.914 42 H 0.084 0.916 43 H 0.087 0.913 44 H 0.088 0.912 45 H 0.257 0.743 46 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 0.209 5.156 0.139 5.162 hybrid contribution 0.033 0.421 -0.794 0.899 sum 0.243 5.576 -0.655 5.620 Atomic orbital electron populations 1.86480 1.16803 1.81932 1.49875 1.24781 0.86087 1.10772 0.97258 0.95111 0.80745 0.77707 0.87615 1.19430 0.95574 0.93628 0.94556 1.20791 1.00630 0.99518 0.95117 1.21077 0.97589 0.92800 0.96748 1.20423 1.04755 0.94695 0.96949 1.17997 0.78702 0.86310 0.82466 1.90835 1.56923 1.15752 1.75833 1.45932 1.52710 1.15764 1.23713 1.21452 0.97896 0.95347 0.85228 1.21446 0.96298 0.98674 0.95449 0.90405 1.21633 0.95793 1.00008 0.97936 1.21516 0.99793 0.97821 0.95619 1.21174 0.95426 0.98682 0.95434 0.90334 1.22243 0.85283 0.97954 0.94473 1.86473 1.31009 1.69747 1.50690 1.21513 0.95577 0.99630 0.98269 1.21477 1.00037 0.98508 0.94763 1.18482 0.93324 0.83628 0.91769 1.84751 1.47397 1.19393 1.77094 1.21319 1.00713 0.93868 0.98437 0.76662 0.90159 1.17763 1.17311 0.85590 0.84941 0.76648 0.91101 0.91142 0.92086 0.91442 0.91035 0.92160 0.93645 0.93700 0.77299 0.91419 0.91628 0.91269 0.91207 0.74268 0.83960 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.38 12.74 -35.23 -0.45 -0.07 16 2 C -0.08 0.07 2.80 36.00 0.10 0.17 16 3 Si 0.69 -1.41 29.77 -169.99 -5.06 -6.47 16 4 C -0.03 -0.05 5.43 -104.57 -0.57 -0.62 16 5 C -0.14 -0.18 8.65 -39.63 -0.34 -0.52 16 6 C -0.06 -0.05 9.54 -39.20 -0.37 -0.42 16 7 C -0.16 -0.47 5.89 -104.84 -0.62 -1.09 16 8 C 0.56 2.15 7.76 -12.47 -0.10 2.05 16 9 O -0.52 -3.80 15.16 -16.58 -0.25 -4.05 16 10 N -0.73 -0.51 5.23 -61.35 -0.32 -0.83 16 11 C 0.12 0.04 5.06 -4.05 -0.02 0.02 16 12 C -0.10 0.15 2.22 -90.62 -0.20 -0.05 16 13 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 14 C -0.12 0.12 5.08 -26.73 -0.14 -0.01 16 15 C -0.11 0.06 5.10 -26.73 -0.14 -0.08 16 16 C -0.09 0.05 2.43 -90.62 -0.22 -0.17 16 17 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 18 C 0.08 -0.05 6.43 37.16 0.24 0.18 16 19 O -0.57 -0.36 13.19 -35.23 -0.46 -0.82 16 20 C -0.11 0.19 5.20 -26.70 -0.14 0.05 16 21 C -0.11 0.17 5.21 -26.70 -0.14 0.03 16 22 C 0.17 0.60 6.72 -38.70 -0.26 0.34 16 23 O -0.48 -1.85 11.58 -40.54 -0.47 -2.32 16 24 C -0.12 -0.29 9.53 -39.48 -0.38 -0.66 16 25 H 0.39 -2.20 8.74 45.56 0.40 -1.80 16 26 H 0.08 -0.19 7.96 -51.93 -0.41 -0.60 16 27 H -0.25 -0.07 7.11 56.52 0.40 0.33 16 28 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 29 H 0.13 0.02 4.85 -52.49 -0.25 -0.23 16 30 H 0.13 -0.30 6.40 -52.48 -0.34 -0.63 16 31 H 0.40 -0.67 5.68 -40.82 -0.23 -0.90 16 32 H 0.07 0.11 8.14 -51.92 -0.42 -0.31 16 33 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 34 H 0.06 -0.09 7.18 -51.93 -0.37 -0.46 16 35 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 36 H 0.07 0.07 7.82 -51.93 -0.41 -0.34 16 37 H 0.06 -0.05 8.14 -51.93 -0.42 -0.48 16 38 H 0.05 -0.06 8.14 -51.93 -0.42 -0.49 16 39 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 40 H 0.38 -1.30 9.12 45.56 0.42 -0.88 16 41 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 42 H 0.06 -0.12 8.14 -51.93 -0.42 -0.55 16 43 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 44 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 45 H 0.40 0.06 9.06 45.56 0.41 0.47 16 46 H 0.14 0.20 8.06 -52.49 -0.42 -0.23 16 LS Contribution 367.51 15.07 5.54 5.54 Total: 0.00 -10.27 367.51 -10.25 -20.52 By element: Atomic # 1 Polarization: -5.24 SS G_CDS: -5.48 Total: -10.73 kcal Atomic # 6 Polarization: 2.51 SS G_CDS: -3.29 Total: -0.78 kcal Atomic # 7 Polarization: -0.51 SS G_CDS: -0.32 Total: -0.83 kcal Atomic # 8 Polarization: -5.62 SS G_CDS: -1.63 Total: -7.25 kcal Atomic # 14 Polarization: -1.41 SS G_CDS: -5.06 Total: -6.47 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -10.27 -10.25 -20.52 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_13422076.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -126.539 kcal (2) G-P(sol) polarization free energy of solvation -10.270 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -136.809 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.246 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.515 kcal (6) G-S(sol) free energy of system = (1) + (5) -147.054 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds