Wall clock time and date at job start Sun Mar 7 2021 02:01:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86298 * 109.46858 * 2 1 4 4 C 1.50693 * 109.47661 * 239.99225 * 2 1 3 5 5 C 1.38512 * 119.80211 * 119.72412 * 4 2 1 6 6 C 1.37825 * 120.29526 * 179.76412 * 5 4 2 7 7 C 1.39675 * 119.91220 * 0.53945 * 6 5 4 8 8 C 1.47536 * 120.19421 * 179.74264 * 7 6 5 9 9 O 1.21587 * 119.99870 * 179.97438 * 8 7 6 10 10 N 1.34779 * 119.99767 * 359.97438 * 8 7 6 11 11 C 1.46496 * 119.99922 * 179.97438 * 10 8 7 12 12 C 1.52998 * 109.47542 * 180.02562 * 11 10 8 13 13 H 1.09001 * 109.46568 * 305.00055 * 12 11 10 14 14 C 1.52998 * 109.47194 * 64.99432 * 12 11 10 15 15 C 1.52998 * 109.47194 * 180.02562 * 14 12 11 16 16 C 1.53000 * 109.47683 * 300.00684 * 15 14 12 17 17 H 1.09001 * 109.46645 * 300.00280 * 16 15 14 18 18 C 1.52995 * 109.47300 * 179.97438 * 16 15 14 19 19 O 1.42899 * 109.47075 * 65.00122 * 18 16 15 20 20 C 1.53002 * 109.46892 * 59.99626 * 16 15 14 21 21 C 1.52998 * 109.47500 * 185.00450 * 12 11 10 22 22 C 1.40177 * 119.61122 * 359.71839 * 7 6 5 23 23 O 1.35654 * 120.14461 * 179.97438 * 22 7 6 24 24 C 1.38100 * 119.80637 * 300.00577 * 4 2 1 25 25 H 0.96697 * 114.00527 * 300.00583 * 1 2 3 26 26 H 1.09000 * 109.46638 * 119.99419 * 2 1 3 27 27 H 1.48506 * 109.99834 * 178.67912 * 3 2 1 28 28 H 1.48502 * 110.00011 * 299.99177 * 3 2 1 29 29 H 1.07994 * 119.85073 * 0.02636 * 5 4 2 30 30 H 1.08004 * 120.04468 * 180.26027 * 6 5 4 31 31 H 0.97003 * 119.99953 * 0.02562 * 10 8 7 32 32 H 1.09008 * 109.47168 * 299.99954 * 11 10 8 33 33 H 1.09002 * 109.46927 * 59.99732 * 11 10 8 34 34 H 1.08995 * 109.47719 * 300.00748 * 14 12 11 35 35 H 1.09001 * 109.46855 * 60.00798 * 14 12 11 36 36 H 1.08997 * 109.47397 * 180.02562 * 15 14 12 37 37 H 1.09001 * 109.46568 * 60.00622 * 15 14 12 38 38 H 1.09006 * 109.46998 * 184.99834 * 18 16 15 39 39 H 1.08990 * 109.47288 * 305.00097 * 18 16 15 40 40 H 0.96695 * 114.00516 * 180.02562 * 19 18 16 41 41 H 1.09006 * 109.46839 * 180.02562 * 20 16 15 42 42 H 1.09001 * 109.47259 * 60.00123 * 20 16 15 43 43 H 1.09007 * 109.46496 * 299.99586 * 21 12 11 44 44 H 1.08997 * 109.47375 * 59.99277 * 21 12 11 45 45 H 0.96698 * 114.00262 * 270.02574 * 23 22 7 46 46 H 1.08002 * 119.95747 * 359.97232 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9315 -0.7105 -1.2303 5 6 2.7229 -0.0319 -2.1422 6 6 3.1920 -0.6732 -3.2684 7 6 2.8593 -2.0101 -3.4980 8 6 3.3534 -2.7010 -4.7044 9 8 3.0620 -3.8651 -4.9005 10 7 4.1276 -2.0418 -5.5890 11 6 4.6187 -2.7280 -6.7865 12 6 5.4679 -1.7624 -7.6156 13 1 4.8883 -0.8658 -7.8353 14 6 6.7211 -1.3788 -6.8263 15 6 7.5700 -0.4127 -7.6551 16 6 7.9793 -1.0885 -8.9653 17 1 8.5591 -1.9851 -8.7459 18 6 8.8277 -0.1221 -9.7943 19 8 10.0523 0.1454 -9.1083 20 6 6.7260 -1.4720 -9.7546 21 6 5.8771 -2.4387 -8.9255 22 6 2.0538 -2.6918 -2.5753 23 8 1.7237 -3.9903 -2.7878 24 6 1.5954 -2.0327 -1.4447 25 1 -0.3934 0.4417 0.7649 26 1 1.7923 -0.5138 0.8901 27 1 3.5346 1.7703 0.0322 28 1 1.5616 2.4678 -1.2086 29 1 2.9770 1.0032 -1.9679 30 1 3.8122 -0.1413 -3.9747 31 1 4.3604 -1.1133 -5.4323 32 1 5.2259 -3.5839 -6.4916 33 1 3.7722 -3.0708 -7.3816 34 1 6.4296 -0.8969 -5.8931 35 1 7.3007 -2.2754 -6.6066 36 1 8.4631 -0.1397 -7.0930 37 1 6.9902 0.4839 -7.8744 38 1 9.0448 -0.5696 -10.7643 39 1 8.2809 0.8097 -9.9382 40 1 10.6411 0.7527 -9.5768 41 1 7.0176 -1.9538 -10.6878 42 1 6.1462 -0.5754 -9.9738 43 1 6.4567 -3.3354 -8.7057 44 1 4.9842 -2.7120 -9.4878 45 1 0.9067 -4.1112 -3.2908 46 1 0.9745 -2.5539 -0.7311 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14939082_13422076.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:01:29 Heat of formation + Delta-G solvation = -151.004243 kcal Electronic energy + Delta-G solvation = -27163.934657 eV Core-core repulsion = 23212.292187 eV Total energy + Delta-G solvation = -3951.642469 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -41.78188 -40.48182 -39.70019 -38.45426 -37.62300 -37.23799 -35.84379 -33.53918 -32.33317 -31.74442 -31.27589 -28.57449 -27.17345 -24.87147 -24.00425 -23.84338 -23.13314 -21.74385 -21.61502 -20.78487 -19.46647 -18.81499 -18.44201 -18.23444 -17.71157 -16.82552 -16.69338 -16.52590 -16.34564 -16.07702 -15.85828 -15.53337 -15.32525 -15.17408 -14.96008 -14.74549 -14.47814 -14.19055 -14.04455 -13.97951 -13.52685 -13.42136 -13.14003 -13.00378 -12.85873 -12.58348 -12.50341 -12.12810 -12.08767 -11.95570 -11.88474 -11.44792 -11.23359 -11.10965 -10.96724 -10.80750 -10.50995 -10.27641 -10.08459 -9.90219 -4.91090 -0.54851 -0.01978 1.27261 1.57207 1.69395 1.96082 1.97413 2.42534 3.01570 3.23355 3.27806 3.45753 3.55227 3.62297 3.68475 3.70150 3.73604 3.99879 4.04755 4.12529 4.14541 4.24439 4.27333 4.40541 4.44392 4.47445 4.52993 4.54360 4.60863 4.63444 4.66298 4.72804 4.75544 4.82068 4.90886 5.00718 5.04846 5.09115 5.11185 5.16767 5.20102 5.24623 5.32223 5.41814 5.43098 5.52013 6.34913 6.61607 6.86504 6.87066 7.04723 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.563 6.563 2 C -0.090 4.090 3 Si 0.779 3.221 4 C -0.040 4.040 5 C -0.154 4.154 6 C -0.054 4.054 7 C -0.181 4.181 8 C 0.555 3.445 9 O -0.562 6.562 10 N -0.712 5.712 11 C 0.126 3.874 12 C -0.087 4.087 13 H 0.092 0.908 14 C -0.114 4.114 15 C -0.105 4.105 16 C -0.090 4.090 17 H 0.060 0.940 18 C 0.076 3.924 19 O -0.597 6.597 20 C -0.107 4.107 21 C -0.111 4.111 22 C 0.158 3.842 23 O -0.493 6.493 24 C -0.134 4.134 25 H 0.406 0.594 26 H 0.098 0.902 27 H -0.282 1.282 28 H -0.288 1.288 29 H 0.137 0.863 30 H 0.163 0.837 31 H 0.411 0.589 32 H 0.055 0.945 33 H 0.065 0.935 34 H 0.068 0.932 35 H 0.053 0.947 36 H 0.055 0.945 37 H 0.070 0.930 38 H 0.051 0.949 39 H 0.055 0.945 40 H 0.395 0.605 41 H 0.071 0.929 42 H 0.075 0.925 43 H 0.060 0.940 44 H 0.075 0.925 45 H 0.409 0.591 46 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.528 8.055 0.640 8.098 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.199 4.199 3 Si 0.683 3.317 4 C -0.041 4.041 5 C -0.171 4.171 6 C -0.072 4.072 7 C -0.185 4.185 8 C 0.343 3.657 9 O -0.441 6.441 10 N -0.366 5.366 11 C 0.003 3.997 12 C -0.106 4.106 13 H 0.110 0.890 14 C -0.152 4.152 15 C -0.143 4.143 16 C -0.109 4.109 17 H 0.079 0.921 18 C -0.002 4.002 19 O -0.405 6.405 20 C -0.144 4.144 21 C -0.149 4.149 22 C 0.112 3.888 23 O -0.307 6.307 24 C -0.153 4.153 25 H 0.258 0.742 26 H 0.116 0.884 27 H -0.209 1.209 28 H -0.216 1.216 29 H 0.154 0.846 30 H 0.181 0.819 31 H 0.249 0.751 32 H 0.073 0.927 33 H 0.083 0.917 34 H 0.087 0.913 35 H 0.072 0.928 36 H 0.073 0.927 37 H 0.088 0.912 38 H 0.070 0.930 39 H 0.074 0.926 40 H 0.244 0.756 41 H 0.090 0.910 42 H 0.093 0.907 43 H 0.079 0.921 44 H 0.094 0.906 45 H 0.269 0.731 46 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 0.074 6.965 0.243 6.969 hybrid contribution 0.088 -0.104 -0.827 0.838 sum 0.163 6.861 -0.584 6.887 Atomic orbital electron populations 1.86431 1.16775 1.82577 1.51526 1.25016 0.86326 1.11849 0.96726 0.94042 0.77572 0.74786 0.85283 1.19863 0.95146 0.93543 0.95521 1.21030 1.00719 1.00092 0.95266 1.21372 0.96946 0.91897 0.97018 1.20453 1.05592 0.95630 0.96824 1.18227 0.78614 0.85901 0.82955 1.90805 1.58816 1.17603 1.76890 1.45837 1.51416 1.16234 1.23076 1.21449 0.97677 0.95492 0.85119 1.21354 0.95741 0.98553 0.94957 0.89010 1.21607 0.95750 0.99451 0.98344 1.21458 0.99216 0.98192 0.95425 1.21186 0.95851 0.98083 0.95780 0.92115 1.22315 0.84996 0.98384 0.94478 1.86433 1.31838 1.70466 1.51761 1.21473 0.94975 0.99900 0.98080 1.21487 1.00235 0.98338 0.94807 1.18748 0.93947 0.83573 0.92535 1.84703 1.48322 1.20156 1.77477 1.21391 1.01199 0.94374 0.98306 0.74212 0.88447 1.20904 1.21574 0.84551 0.81948 0.75067 0.92651 0.91702 0.91312 0.92791 0.92664 0.91173 0.93028 0.92643 0.75552 0.91042 0.90663 0.92082 0.90618 0.73063 0.83613 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.25 12.74 -148.98 -1.90 -0.65 16 2 C -0.09 0.23 2.80 71.23 0.20 0.43 16 3 Si 0.78 -3.93 29.77 68.60 2.04 -1.89 16 4 C -0.04 -0.13 5.43 -19.83 -0.11 -0.24 16 5 C -0.15 -0.32 8.65 22.24 0.19 -0.13 16 6 C -0.05 -0.06 9.54 22.52 0.21 0.15 16 7 C -0.18 -1.19 5.89 -20.01 -0.12 -1.31 16 8 C 0.56 4.91 7.76 86.70 0.67 5.59 16 9 O -0.56 -9.44 15.16 16.92 0.26 -9.18 16 10 N -0.71 -1.13 5.23 -466.27 -2.44 -3.57 16 11 C 0.13 0.16 5.06 86.38 0.44 0.60 16 12 C -0.09 0.30 2.22 -10.80 -0.02 0.27 16 13 H 0.09 -0.51 8.14 -2.39 -0.02 -0.52 16 14 C -0.11 0.24 5.08 30.59 0.16 0.40 16 15 C -0.11 0.14 5.10 30.59 0.16 0.29 16 16 C -0.09 0.10 2.43 -10.79 -0.03 0.07 16 17 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 18 C 0.08 -0.13 6.43 71.98 0.46 0.33 16 19 O -0.60 -0.79 13.19 -148.98 -1.97 -2.76 16 20 C -0.11 0.43 5.20 30.61 0.16 0.59 16 21 C -0.11 0.36 5.21 30.61 0.16 0.52 16 22 C 0.16 1.32 6.72 22.84 0.15 1.47 16 23 O -0.49 -4.89 11.58 -68.78 -0.80 -5.69 16 24 C -0.13 -0.73 9.53 22.34 0.21 -0.52 16 25 H 0.41 -5.16 8.74 -74.06 -0.65 -5.81 16 26 H 0.10 -0.59 7.96 -2.39 -0.02 -0.61 16 27 H -0.28 0.06 7.11 99.48 0.71 0.77 16 28 H -0.29 -0.45 7.11 99.48 0.71 0.25 16 29 H 0.14 -0.06 4.85 -2.91 -0.01 -0.08 16 30 H 0.16 -0.99 6.40 -2.91 -0.02 -1.01 16 31 H 0.41 -1.77 5.68 -92.71 -0.53 -2.29 16 32 H 0.06 0.27 8.14 -2.38 -0.02 0.25 16 33 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 34 H 0.07 -0.26 7.18 -2.39 -0.02 -0.27 16 35 H 0.05 0.05 8.14 -2.39 -0.02 0.03 16 36 H 0.05 0.13 7.82 -2.39 -0.02 0.11 16 37 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 38 H 0.05 -0.17 8.14 -2.38 -0.02 -0.19 16 39 H 0.06 -0.22 8.14 -2.39 -0.02 -0.24 16 40 H 0.39 -2.73 9.12 -74.06 -0.68 -3.40 16 41 H 0.07 -0.32 8.14 -2.38 -0.02 -0.33 16 42 H 0.07 -0.41 8.14 -2.39 -0.02 -0.43 16 43 H 0.06 -0.09 8.14 -2.38 -0.02 -0.11 16 44 H 0.08 -0.31 8.14 -2.39 -0.02 -0.33 16 45 H 0.41 1.12 9.06 -74.06 -0.67 0.45 16 46 H 0.15 0.55 8.06 -2.91 -0.02 0.53 16 Total: 0.00 -25.04 367.51 -3.35 -28.39 By element: Atomic # 1 Polarization: -11.72 SS G_CDS: -1.45 Total: -13.17 kcal Atomic # 6 Polarization: 5.61 SS G_CDS: 2.90 Total: 8.51 kcal Atomic # 7 Polarization: -1.13 SS G_CDS: -2.44 Total: -3.57 kcal Atomic # 8 Polarization: -13.87 SS G_CDS: -4.40 Total: -18.28 kcal Atomic # 14 Polarization: -3.93 SS G_CDS: 2.04 Total: -1.89 kcal Total: -25.04 -3.35 -28.39 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_13422076.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -122.617 kcal (2) G-P(sol) polarization free energy of solvation -25.036 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -147.652 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.352 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.388 kcal (6) G-S(sol) free energy of system = (1) + (5) -151.004 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds