Wall clock time and date at job start Sun Mar 7 2021 02:01:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86303 * 109.46880 * 2 1 4 4 C 1.50701 * 109.46995 * 239.99891 * 2 1 3 5 5 C 1.32685 * 124.68611 * 300.27488 * 4 2 1 6 6 C 1.44515 * 113.09714 * 180.17882 * 5 4 2 7 7 C 1.47040 * 123.49102 * 179.80802 * 6 5 4 8 8 O 1.21656 * 120.00198 * 179.73542 * 7 6 5 9 9 N 1.34782 * 120.00447 * 359.72697 * 7 6 5 10 10 C 1.46493 * 120.00325 * 180.02562 * 9 7 6 11 11 C 1.52997 * 109.47228 * 180.02562 * 10 9 7 12 12 H 1.09002 * 109.47497 * 54.99778 * 11 10 9 13 13 C 1.53002 * 109.47415 * 175.00130 * 11 10 9 14 14 C 1.53000 * 109.47233 * 180.02562 * 13 11 10 15 15 C 1.52997 * 109.47060 * 299.99657 * 14 13 11 16 16 H 1.09002 * 109.47153 * 300.00319 * 15 14 13 17 17 C 1.52992 * 109.47482 * 180.02562 * 15 14 13 18 18 O 1.42900 * 109.47498 * 174.99804 * 17 15 14 19 19 C 1.52999 * 109.47317 * 59.99960 * 15 14 13 20 20 C 1.52997 * 109.47232 * 295.00003 * 11 10 9 21 21 C 1.36220 * 113.01358 * 359.53929 * 6 5 4 22 22 Cl 1.73598 * 124.60152 * 180.24214 * 21 6 5 23 23 S 1.70445 * 110.79081 * 0.24807 * 21 6 5 24 24 H 0.96697 * 114.00665 * 60.00114 * 1 2 3 25 25 H 1.09004 * 109.47113 * 120.00406 * 2 1 3 26 26 H 1.48501 * 109.99710 * 60.00168 * 3 2 1 27 27 H 1.48500 * 109.99623 * 181.31958 * 3 2 1 28 28 H 1.08002 * 123.45383 * 0.02562 * 5 4 2 29 29 H 0.97003 * 119.99405 * 0.02562 * 9 7 6 30 30 H 1.09000 * 109.47277 * 60.00341 * 10 9 7 31 31 H 1.09001 * 109.47111 * 300.00156 * 10 9 7 32 32 H 1.08992 * 109.47063 * 59.99950 * 13 11 10 33 33 H 1.09004 * 109.46733 * 299.99664 * 13 11 10 34 34 H 1.09002 * 109.47398 * 59.99826 * 14 13 11 35 35 H 1.09001 * 109.47194 * 180.02562 * 14 13 11 36 36 H 1.09001 * 109.47359 * 295.00205 * 17 15 14 37 37 H 1.09002 * 109.46906 * 55.00224 * 17 15 14 38 38 H 0.96702 * 114.00498 * 180.02562 * 18 17 15 39 39 H 1.09000 * 109.47486 * 180.02562 * 19 15 14 40 40 H 1.09002 * 109.46716 * 60.00091 * 19 15 14 41 41 H 1.09002 * 109.47153 * 299.99992 * 20 11 10 42 42 H 1.09001 * 109.47289 * 60.00075 * 20 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6644 -1.9741 -1.5346 6 6 2.2776 -2.4012 -2.7716 7 6 2.1352 -3.7572 -3.3219 8 8 2.6759 -4.0473 -4.3724 9 7 1.4057 -4.6790 -2.6626 10 6 1.2643 -6.0302 -3.2107 11 6 0.3934 -6.8714 -2.2753 12 1 -0.5588 -6.3662 -2.1132 13 6 0.1425 -8.2420 -2.9073 14 6 -0.7289 -9.0830 -1.9722 15 6 -0.0129 -9.2627 -0.6321 16 1 0.9393 -9.7680 -0.7938 17 6 -0.8839 -10.1041 0.3028 18 8 -0.1676 -10.3700 1.5104 19 6 0.2381 -7.8921 -0.0001 20 6 1.1099 -7.0510 -0.9355 21 6 2.9965 -1.4155 -3.3777 22 17 3.8503 -1.5985 -4.8781 23 16 2.9440 0.0216 -2.4628 24 1 -0.3934 0.4416 -0.7650 25 1 1.7924 -0.5139 0.8900 26 1 1.5614 2.4678 1.2085 27 1 3.5346 1.7703 -0.0321 28 1 1.0536 -2.6183 -0.9195 29 1 0.9744 -4.4477 -1.8251 30 1 2.2483 -6.4898 -3.3026 31 1 0.7950 -5.9765 -4.1930 32 1 1.0946 -8.7471 -3.0693 33 1 -0.3681 -8.1140 -3.8618 34 1 -1.6811 -8.5776 -1.8105 35 1 -0.9073 -10.0596 -2.4222 36 1 -1.7988 -9.5592 0.5355 37 1 -1.1359 -11.0457 -0.1850 38 1 -0.6603 -10.9008 2.1513 39 1 0.7486 -8.0201 0.9544 40 1 -0.7141 -7.3868 0.1616 41 1 2.0621 -7.5562 -1.0976 42 1 1.2887 -6.0746 -0.4852 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14939082_13431040.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:01:45 Heat of formation + Delta-G solvation = -108.104932 kcal Electronic energy + Delta-G solvation = -25653.598908 eV Core-core repulsion = 21751.851339 eV Total energy + Delta-G solvation = -3901.747569 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.084 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -41.09408 -40.09805 -38.94788 -37.95002 -37.59775 -36.97078 -35.71722 -32.83533 -31.80026 -31.67186 -28.51934 -26.96537 -25.88478 -24.27198 -23.65885 -22.17200 -21.71364 -20.97604 -20.50594 -19.40037 -18.26532 -18.07484 -17.87681 -16.78886 -16.69266 -16.42455 -16.07208 -15.99318 -15.74846 -15.55495 -15.26306 -14.90776 -14.83145 -14.65354 -14.41648 -14.27229 -14.10409 -13.84758 -13.43826 -13.19207 -13.01357 -12.86454 -12.55775 -12.52455 -12.41292 -12.15003 -12.04953 -11.97119 -11.91810 -11.49336 -11.23368 -11.14119 -10.87090 -10.83369 -10.65384 -10.08698 -9.89837 -9.66583 -5.30041 -0.58841 -0.20397 0.43377 0.70518 1.03851 1.10539 1.44371 1.77032 2.23034 2.32092 3.14235 3.16728 3.39837 3.54439 3.63979 3.68547 3.83436 3.87674 4.00573 4.11069 4.20948 4.23193 4.35167 4.38568 4.40420 4.42946 4.49093 4.57185 4.62402 4.67763 4.71605 4.81223 4.86245 4.91243 4.99745 5.07025 5.12339 5.16585 5.22286 5.37234 5.41988 5.49187 6.31260 6.48009 6.65423 7.24605 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.024 4.024 3 Si 0.649 3.351 4 C -0.236 4.236 5 C -0.071 4.071 6 C -0.159 4.159 7 C 0.574 3.426 8 O -0.519 6.519 9 N -0.723 5.723 10 C 0.125 3.875 11 C -0.100 4.100 12 H 0.078 0.922 13 C -0.110 4.110 14 C -0.112 4.112 15 C -0.089 4.089 16 H 0.078 0.922 17 C 0.078 3.922 18 O -0.574 6.574 19 C -0.110 4.110 20 C -0.116 4.116 21 C -0.115 4.115 22 Cl 0.027 6.973 23 S 0.236 5.764 24 H 0.383 0.617 25 H 0.128 0.872 26 H -0.228 1.228 27 H -0.233 1.233 28 H 0.157 0.843 29 H 0.400 0.600 30 H 0.071 0.929 31 H 0.071 0.929 32 H 0.068 0.932 33 H 0.069 0.931 34 H 0.065 0.935 35 H 0.067 0.933 36 H 0.045 0.955 37 H 0.045 0.955 38 H 0.380 0.620 39 H 0.070 0.930 40 H 0.060 0.940 41 H 0.066 0.934 42 H 0.061 0.939 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.266 1.274 2.228 4.979 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.138 4.138 3 Si 0.548 3.452 4 C -0.353 4.353 5 C -0.100 4.100 6 C -0.177 4.177 7 C 0.359 3.641 8 O -0.395 6.395 9 N -0.375 5.375 10 C 0.001 3.999 11 C -0.118 4.118 12 H 0.097 0.903 13 C -0.148 4.148 14 C -0.150 4.150 15 C -0.107 4.107 16 H 0.096 0.904 17 C 0.000 4.000 18 O -0.379 6.379 19 C -0.147 4.147 20 C -0.153 4.153 21 C -0.262 4.262 22 Cl 0.056 6.944 23 S 0.500 5.500 24 H 0.230 0.770 25 H 0.145 0.855 26 H -0.151 1.151 27 H -0.157 1.157 28 H 0.174 0.826 29 H 0.235 0.765 30 H 0.089 0.911 31 H 0.089 0.911 32 H 0.087 0.913 33 H 0.088 0.912 34 H 0.084 0.916 35 H 0.085 0.915 36 H 0.063 0.937 37 H 0.063 0.937 38 H 0.227 0.773 39 H 0.089 0.911 40 H 0.079 0.921 41 H 0.085 0.915 42 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges -2.135 3.112 1.795 4.179 hybrid contribution -1.149 -2.354 0.786 2.735 sum -3.284 0.758 2.581 4.245 Atomic orbital electron populations 1.86535 1.16333 1.81645 1.49285 1.24434 0.85360 1.09149 0.94841 0.95059 0.82413 0.77435 0.90270 1.24801 1.07935 0.99339 1.03241 1.20993 0.99268 0.95024 0.94697 1.20247 1.04430 0.95558 0.97510 1.17390 0.79023 0.83488 0.84192 1.90883 1.46555 1.80116 1.21968 1.45831 1.53088 1.12029 1.26597 1.21451 1.00526 0.80849 0.97040 1.21442 0.99044 0.96190 0.95158 0.90337 1.21465 1.00632 0.94292 0.98391 1.21502 0.98751 1.00315 0.94421 1.21172 0.99585 0.96064 0.93890 0.90383 1.22245 0.94121 0.98060 0.85542 1.86473 1.46107 1.76171 1.29166 1.21522 0.99984 0.94454 0.98773 1.21639 0.99064 1.00054 0.94570 1.25518 1.02990 1.00861 0.96786 1.98442 1.73275 1.97063 1.25641 1.83320 1.46946 1.08638 1.11063 0.76958 0.85507 1.15095 1.15748 0.82599 0.76526 0.91112 0.91101 0.91318 0.91215 0.91605 0.91461 0.93683 0.93676 0.77310 0.91080 0.92118 0.91519 0.92018 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 1.07 12.84 -35.23 -0.45 0.62 16 2 C -0.02 0.06 2.95 36.01 0.11 0.16 16 3 Si 0.65 -1.60 30.91 -169.99 -5.25 -6.85 16 4 C -0.24 0.34 5.68 -36.20 -0.21 0.13 16 5 C -0.07 0.06 9.71 -39.00 -0.38 -0.32 16 6 C -0.16 -0.26 5.98 -104.58 -0.63 -0.88 16 7 C 0.57 1.76 7.79 -12.69 -0.10 1.67 16 8 O -0.52 -3.40 14.91 5.23 0.08 -3.32 16 9 N -0.72 -0.06 5.26 -61.51 -0.32 -0.38 16 10 C 0.12 -0.02 5.06 -4.05 -0.02 -0.04 16 11 C -0.10 0.18 2.22 -90.62 -0.20 -0.02 16 12 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 13 C -0.11 0.20 5.20 -26.73 -0.14 0.06 16 14 C -0.11 0.20 5.20 -26.73 -0.14 0.07 16 15 C -0.09 0.06 2.43 -90.63 -0.22 -0.16 16 16 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 17 C 0.08 -0.06 6.43 37.15 0.24 0.18 16 18 O -0.57 -0.31 13.20 -35.23 -0.46 -0.77 16 19 C -0.11 0.08 5.10 -26.71 -0.14 -0.06 16 20 C -0.12 0.16 5.08 -26.71 -0.14 0.02 16 21 C -0.11 -0.23 6.87 30.01 0.21 -0.02 16 22 Cl 0.03 0.09 27.20 -51.86 -1.41 -1.32 16 23 S 0.24 -0.19 20.17 -107.50 -2.17 -2.36 16 24 H 0.38 -2.14 8.70 45.56 0.40 -1.74 16 25 H 0.13 -0.30 7.96 -51.93 -0.41 -0.71 16 26 H -0.23 -0.06 7.11 56.52 0.40 0.34 16 27 H -0.23 0.09 7.11 56.52 0.40 0.50 16 28 H 0.16 -0.43 7.10 -52.49 -0.37 -0.81 16 29 H 0.40 -0.88 6.20 -40.82 -0.25 -1.14 16 30 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 31 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 32 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 33 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 34 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 35 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 36 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 37 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 38 H 0.38 -1.32 9.12 45.56 0.42 -0.90 16 39 H 0.07 0.06 7.82 -51.93 -0.41 -0.35 16 40 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 41 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 42 H 0.06 -0.11 7.18 -51.93 -0.37 -0.48 16 LS Contribution 366.19 15.07 5.52 5.52 Total: 0.00 -7.68 366.19 -11.50 -19.18 By element: Atomic # 1 Polarization: -5.82 SS G_CDS: -5.28 Total: -11.09 kcal Atomic # 6 Polarization: 2.53 SS G_CDS: -1.75 Total: 0.79 kcal Atomic # 7 Polarization: -0.06 SS G_CDS: -0.32 Total: -0.38 kcal Atomic # 8 Polarization: -2.64 SS G_CDS: -0.84 Total: -3.48 kcal Atomic # 14 Polarization: -1.60 SS G_CDS: -5.25 Total: -6.85 kcal Atomic # 16 Polarization: -0.19 SS G_CDS: -2.17 Total: -2.36 kcal Atomic # 17 Polarization: 0.09 SS G_CDS: -1.41 Total: -1.32 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -7.68 -11.50 -19.18 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_13431040.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.920 kcal (2) G-P(sol) polarization free energy of solvation -7.681 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.601 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.504 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.185 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.105 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds