Wall clock time and date at job start Sun Mar 7 2021 02:01:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86304 * 109.46812 * 2 1 4 4 C 1.50700 * 109.47409 * 240.00164 * 2 1 3 5 5 C 1.34176 * 125.43798 * 300.01329 * 4 2 1 6 6 C 1.47016 * 105.95418 * 179.97438 * 5 4 2 7 7 C 1.47376 * 127.19272 * 180.02562 * 6 5 4 8 8 O 1.21617 * 120.00172 * 359.97438 * 7 6 5 9 9 N 1.34777 * 120.00021 * 179.97438 * 7 6 5 10 10 C 1.46506 * 119.99656 * 179.97438 * 9 7 6 11 11 C 1.53004 * 109.46758 * 180.02562 * 10 9 7 12 12 H 1.09003 * 109.47019 * 305.00262 * 11 10 9 13 13 C 1.53001 * 109.47052 * 65.00386 * 11 10 9 14 14 C 1.52996 * 109.46959 * 179.97438 * 13 11 10 15 15 C 1.53004 * 109.47528 * 299.99725 * 14 13 11 16 16 H 1.08993 * 109.46975 * 300.00517 * 15 14 13 17 17 C 1.52996 * 109.47528 * 180.02562 * 15 14 13 18 18 O 1.42899 * 109.46909 * 65.00248 * 17 15 14 19 19 C 1.53000 * 109.46415 * 60.00069 * 15 14 13 20 20 C 1.52998 * 109.46814 * 185.00425 * 11 10 9 21 21 C 1.36414 * 105.61615 * 0.02562 * 6 5 4 22 22 O 1.33654 * 108.39828 * 359.97438 * 21 6 5 23 23 H 0.96699 * 114.00232 * 59.99941 * 1 2 3 24 24 H 1.08997 * 109.47483 * 119.99710 * 2 1 3 25 25 H 1.48497 * 110.00144 * 298.68038 * 3 2 1 26 26 H 1.48505 * 110.00157 * 60.00367 * 3 2 1 27 27 H 1.07997 * 127.01841 * 359.94263 * 5 4 2 28 28 H 0.96998 * 120.00207 * 0.02562 * 9 7 6 29 29 H 1.08997 * 109.47250 * 299.99916 * 10 9 7 30 30 H 1.09002 * 109.47040 * 60.00509 * 10 9 7 31 31 H 1.09001 * 109.46953 * 299.99635 * 13 11 10 32 32 H 1.09003 * 109.47309 * 60.00054 * 13 11 10 33 33 H 1.08999 * 109.46946 * 179.97438 * 14 13 11 34 34 H 1.09000 * 109.47266 * 59.99652 * 14 13 11 35 35 H 1.08997 * 109.47139 * 185.00282 * 17 15 14 36 36 H 1.09007 * 109.47024 * 305.00305 * 17 15 14 37 37 H 0.96700 * 113.99826 * 180.02562 * 18 17 15 38 38 H 1.09002 * 109.47056 * 180.02562 * 19 15 14 39 39 H 1.09000 * 109.47520 * 60.00599 * 19 15 14 40 40 H 1.09003 * 109.47195 * 299.99730 * 20 11 10 41 41 H 1.08999 * 109.47397 * 60.00121 * 20 11 10 42 42 H 1.08007 * 125.80379 * 180.26684 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.6752 -1.9880 -1.5503 6 6 2.3680 -2.2325 -2.8237 7 6 2.3961 -3.4874 -3.5960 8 8 1.8003 -4.4660 -3.1880 9 7 3.0821 -3.5506 -4.7544 10 6 3.1104 -4.7983 -5.5217 11 6 3.9525 -4.6016 -6.7840 12 1 3.5676 -3.7526 -7.3488 13 6 5.4069 -4.3354 -6.3904 14 6 6.2490 -4.1394 -7.6526 15 6 6.1769 -5.4012 -8.5150 16 1 6.5616 -6.2500 -7.9498 17 6 7.0196 -5.2054 -9.7769 18 8 8.3956 -5.0730 -9.4150 19 6 4.7225 -5.6673 -8.9085 20 6 3.8803 -5.8631 -7.6468 21 6 2.9794 -1.0551 -3.1411 22 8 2.7063 -0.1659 -2.1814 23 1 -0.3933 0.4417 -0.7650 24 1 1.7924 -0.5138 0.8900 25 1 1.5878 2.4586 -1.2242 26 1 1.5614 2.4680 1.2086 27 1 1.0818 -2.6929 -0.9870 28 1 3.5576 -2.7703 -5.0796 29 1 3.5482 -5.5894 -4.9130 30 1 2.0942 -5.0756 -5.8021 31 1 5.4582 -3.4367 -5.7758 32 1 5.7917 -5.1845 -5.8256 33 1 7.2850 -3.9492 -7.3722 34 1 5.8643 -3.2905 -8.2179 35 1 6.8976 -6.0675 -10.4326 36 1 6.6922 -4.3046 -10.2963 37 1 8.9896 -4.9452 -10.1672 38 1 4.6710 -6.5665 -9.5225 39 1 4.3378 -4.8185 -9.4738 40 1 4.2652 -6.7122 -7.0819 41 1 2.8442 -6.0528 -7.9271 42 1 3.5781 -0.8712 -4.0210 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14939082_13456056.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:01:47 Heat of formation + Delta-G solvation = -119.175073 kcal Electronic energy + Delta-G solvation = -23642.007917 eV Core-core repulsion = 19975.509424 eV Total energy + Delta-G solvation = -3666.498493 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.150 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -43.71865 -40.79870 -39.82415 -38.16794 -37.66521 -35.76581 -34.01974 -32.88618 -31.84960 -31.69272 -28.36578 -26.69479 -25.40182 -24.17214 -23.54742 -22.26217 -21.76769 -21.08939 -20.62132 -19.41432 -18.28440 -17.91396 -17.58206 -17.30888 -16.85477 -16.65068 -16.23286 -16.01788 -15.87821 -15.75464 -15.18884 -14.96377 -14.82882 -14.49231 -14.15240 -13.98842 -13.93934 -13.61321 -13.47928 -13.22751 -12.96211 -12.92013 -12.59362 -12.17951 -12.09522 -12.00917 -11.52767 -11.29109 -11.17679 -11.03203 -10.90780 -10.87859 -10.75674 -10.11151 -9.80353 -5.01276 0.23490 0.88815 1.12441 1.46508 1.69818 1.90814 2.09672 2.38288 3.11669 3.14071 3.36448 3.51010 3.57950 3.61353 3.65143 3.91020 3.97386 4.07747 4.18191 4.28774 4.32553 4.35823 4.39202 4.39666 4.45573 4.53780 4.58962 4.59488 4.67986 4.75593 4.79723 4.85719 4.96817 5.03217 5.09000 5.12831 5.18324 5.22514 5.33681 5.37630 5.45137 5.81751 6.21957 6.44552 6.63149 7.22683 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.035 4.035 3 Si 0.705 3.295 4 C -0.057 4.057 5 C -0.123 4.123 6 C -0.237 4.237 7 C 0.586 3.414 8 O -0.531 6.531 9 N -0.727 5.727 10 C 0.124 3.876 11 C -0.100 4.100 12 H 0.078 0.922 13 C -0.116 4.116 14 C -0.110 4.110 15 C -0.089 4.089 16 H 0.078 0.922 17 C 0.078 3.922 18 O -0.574 6.574 19 C -0.112 4.112 20 C -0.110 4.110 21 C 0.031 3.969 22 O -0.165 6.165 23 H 0.381 0.619 24 H 0.138 0.862 25 H -0.257 1.257 26 H -0.249 1.249 27 H 0.162 0.838 28 H 0.397 0.603 29 H 0.071 0.929 30 H 0.070 0.930 31 H 0.061 0.939 32 H 0.067 0.933 33 H 0.071 0.929 34 H 0.060 0.940 35 H 0.045 0.955 36 H 0.045 0.955 37 H 0.380 0.620 38 H 0.067 0.933 39 H 0.065 0.935 40 H 0.068 0.932 41 H 0.069 0.931 42 H 0.213 0.787 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.933 3.005 -4.514 6.699 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.326 6.326 2 C -0.145 4.145 3 Si 0.604 3.396 4 C -0.105 4.105 5 C -0.143 4.143 6 C -0.241 4.241 7 C 0.374 3.626 8 O -0.408 6.408 9 N -0.379 5.379 10 C 0.001 3.999 11 C -0.118 4.118 12 H 0.096 0.904 13 C -0.153 4.153 14 C -0.148 4.148 15 C -0.107 4.107 16 H 0.097 0.903 17 C 0.000 4.000 18 O -0.379 6.379 19 C -0.150 4.150 20 C -0.148 4.148 21 C -0.040 4.040 22 O -0.061 6.061 23 H 0.229 0.771 24 H 0.155 0.845 25 H -0.181 1.181 26 H -0.173 1.173 27 H 0.180 0.820 28 H 0.232 0.768 29 H 0.089 0.911 30 H 0.089 0.911 31 H 0.080 0.920 32 H 0.085 0.915 33 H 0.090 0.910 34 H 0.079 0.921 35 H 0.063 0.937 36 H 0.063 0.937 37 H 0.227 0.773 38 H 0.086 0.914 39 H 0.084 0.916 40 H 0.087 0.913 41 H 0.088 0.912 42 H 0.230 0.770 Dipole moment (debyes) X Y Z Total from point charges 3.194 3.025 -3.043 5.349 hybrid contribution -0.606 -0.064 -1.533 1.650 sum 2.588 2.961 -4.577 6.034 Atomic orbital electron populations 1.86680 1.16594 1.80148 1.49200 1.24383 0.84027 1.12256 0.93814 0.94436 0.91260 0.72976 0.80902 1.22678 0.99881 0.94142 0.93818 1.22540 1.01128 0.95434 0.95186 1.21539 1.07674 0.95162 0.99738 1.17261 0.78591 0.86658 0.80130 1.90826 1.43978 1.36917 1.69125 1.45838 1.53498 1.15307 1.23272 1.21464 1.00611 0.86053 0.91803 1.21446 0.95596 0.99540 0.95252 0.90365 1.21633 0.94005 1.02002 0.97688 1.21516 1.00550 0.96973 0.95715 1.21172 0.94341 0.99423 0.95788 0.90346 1.22243 0.81792 0.99488 0.96446 1.86472 1.17570 1.96188 1.37690 1.21494 0.93847 1.02096 0.97560 1.21462 1.00431 0.97075 0.95868 1.24459 0.99647 0.87099 0.92771 1.83685 1.54612 1.40010 1.27837 0.77104 0.84486 1.18067 1.17345 0.82034 0.76810 0.91054 0.91122 0.91996 0.91454 0.91013 0.92149 0.93667 0.93695 0.77288 0.91437 0.91628 0.91277 0.91211 0.77037 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.35 12.86 -35.23 -0.45 -0.81 16 2 C -0.04 0.02 2.98 36.01 0.11 0.13 16 3 Si 0.71 -1.02 32.08 -169.99 -5.45 -6.47 16 4 C -0.06 -0.03 6.20 -35.74 -0.22 -0.25 16 5 C -0.12 -0.27 10.88 -37.46 -0.41 -0.67 16 6 C -0.24 -0.34 6.31 -103.28 -0.65 -0.99 16 7 C 0.59 1.73 7.81 -12.54 -0.10 1.63 16 8 O -0.53 -3.93 16.98 5.26 0.09 -3.84 16 9 N -0.73 0.45 5.28 -61.39 -0.32 0.12 16 10 C 0.12 -0.06 5.06 -4.04 -0.02 -0.08 16 11 C -0.10 0.24 2.23 -90.62 -0.20 0.04 16 12 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 13 C -0.12 0.25 5.08 -26.73 -0.14 0.11 16 14 C -0.11 0.15 5.10 -26.73 -0.14 0.02 16 15 C -0.09 0.10 2.43 -90.62 -0.22 -0.12 16 16 H 0.08 0.01 8.14 -51.93 -0.42 -0.42 16 17 C 0.08 -0.09 6.43 37.16 0.24 0.14 16 18 O -0.57 -0.07 13.20 -35.23 -0.46 -0.53 16 19 C -0.11 0.25 5.20 -26.75 -0.14 0.11 16 20 C -0.11 0.24 5.20 -26.75 -0.14 0.10 16 21 C 0.03 -0.05 11.61 30.07 0.35 0.30 16 22 O -0.17 0.06 8.89 7.65 0.07 0.13 16 23 H 0.38 -0.83 8.70 45.56 0.40 -0.43 16 24 H 0.14 -0.27 7.96 -51.93 -0.41 -0.68 16 25 H -0.26 -0.27 7.11 56.52 0.40 0.14 16 26 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 27 H 0.16 0.44 8.06 -52.49 -0.42 0.02 16 28 H 0.40 -1.46 6.62 -40.82 -0.27 -1.73 16 29 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 30 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 31 H 0.06 -0.18 7.18 -51.93 -0.37 -0.56 16 32 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 33 H 0.07 0.01 7.82 -51.93 -0.41 -0.40 16 34 H 0.06 -0.11 8.14 -51.93 -0.42 -0.53 16 35 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 36 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 37 H 0.38 -1.47 9.12 45.56 0.42 -1.05 16 38 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 39 H 0.06 -0.16 8.14 -51.93 -0.42 -0.58 16 40 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 41 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 42 H 0.21 -1.31 7.47 -52.48 -0.39 -1.70 16 LS Contribution 346.66 15.07 5.22 5.22 Total: 0.00 -9.43 346.66 -8.73 -18.16 By element: Atomic # 1 Polarization: -6.72 SS G_CDS: -5.74 Total: -12.45 kcal Atomic # 6 Polarization: 2.15 SS G_CDS: -1.68 Total: 0.47 kcal Atomic # 7 Polarization: 0.45 SS G_CDS: -0.32 Total: 0.12 kcal Atomic # 8 Polarization: -4.29 SS G_CDS: -0.76 Total: -5.05 kcal Atomic # 14 Polarization: -1.02 SS G_CDS: -5.45 Total: -6.47 kcal Total LS contribution 5.22 Total: 5.22 kcal Total: -9.43 -8.73 -18.16 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_13456056.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -101.015 kcal (2) G-P(sol) polarization free energy of solvation -9.432 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -110.447 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.728 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.160 kcal (6) G-S(sol) free energy of system = (1) + (5) -119.175 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds