Wall clock time and date at job start Sun Mar 7 2021 02:01:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86299 * 109.47176 * 2 1 4 4 C 1.50703 * 109.46788 * 240.00544 * 2 1 3 5 5 C 1.31110 * 118.54730 * 119.97981 * 4 2 1 6 6 N 1.38926 * 121.84985 * 179.60984 * 5 4 2 7 7 C 1.47034 * 118.88063 * 13.32321 * 6 5 4 8 8 C 1.50704 * 109.82085 * 196.79473 * 7 6 5 9 9 O 1.21280 * 119.99632 * 18.20229 * 8 7 6 10 10 N 1.34775 * 120.00032 * 198.20537 * 8 7 6 11 11 C 1.46496 * 120.00104 * 179.97438 * 10 8 7 12 12 C 1.52999 * 109.47342 * 180.02562 * 11 10 8 13 13 H 1.09007 * 109.46895 * 55.00001 * 12 11 10 14 14 C 1.52998 * 109.47197 * 175.00124 * 12 11 10 15 15 C 1.52999 * 109.46860 * 180.02562 * 14 12 11 16 16 C 1.52998 * 109.47147 * 299.99580 * 15 14 12 17 17 H 1.09000 * 109.47513 * 300.00527 * 16 15 14 18 18 C 1.52999 * 109.47117 * 180.02562 * 16 15 14 19 19 O 1.42903 * 109.47256 * 175.00473 * 18 16 15 20 20 C 1.52998 * 109.46898 * 60.00444 * 16 15 14 21 21 C 1.52998 * 109.47110 * 295.00289 * 12 11 10 22 22 C 1.53546 * 107.65522 * 316.32993 * 7 6 5 23 23 C 1.50209 * 118.54570 * 299.99665 * 4 2 1 24 24 H 0.96699 * 114.00019 * 59.99548 * 1 2 3 25 25 H 1.08998 * 109.47143 * 120.00872 * 2 1 3 26 26 H 1.48506 * 109.99724 * 60.00423 * 3 2 1 27 27 H 1.48502 * 109.99789 * 181.31726 * 3 2 1 28 28 H 1.08005 * 119.07961 * 359.63972 * 5 4 2 29 29 H 0.96996 * 120.56228 * 193.33521 * 6 5 4 30 30 H 1.08997 * 109.87876 * 75.90319 * 7 6 5 31 31 H 0.97003 * 119.99572 * 359.97438 * 10 8 7 32 32 H 1.09000 * 109.47063 * 60.00171 * 11 10 8 33 33 H 1.09005 * 109.47060 * 300.00259 * 11 10 8 34 34 H 1.08994 * 109.47318 * 59.99874 * 14 12 11 35 35 H 1.09002 * 109.47117 * 299.99807 * 14 12 11 36 36 H 1.09004 * 109.46910 * 180.02562 * 15 14 12 37 37 H 1.09003 * 109.47848 * 60.00170 * 15 14 12 38 38 H 1.08997 * 109.47286 * 55.00033 * 18 16 15 39 39 H 1.09008 * 109.47201 * 294.99814 * 18 16 15 40 40 H 0.96700 * 114.00311 * 180.02562 * 19 18 16 41 41 H 1.08994 * 109.47318 * 60.00029 * 20 16 15 42 42 H 1.09002 * 109.47117 * 180.02562 * 20 16 15 43 43 H 1.09007 * 109.47007 * 299.99643 * 21 12 11 44 44 H 1.08996 * 109.47207 * 59.99604 * 21 12 11 45 45 H 1.09001 * 109.61810 * 180.67406 * 22 7 6 46 46 H 1.08998 * 109.62010 * 301.03963 * 22 7 6 47 47 H 1.08999 * 109.32663 * 79.77506 * 23 4 2 48 48 H 1.08994 * 109.32738 * 320.29282 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7103 -1.2306 5 6 2.6826 -0.0458 -2.0748 6 7 3.1892 -0.6351 -3.2264 7 6 2.6444 -1.9301 -3.6600 8 6 3.5806 -2.5723 -4.6511 9 8 4.7319 -2.1986 -4.7277 10 7 3.1385 -3.5618 -5.4523 11 6 4.0485 -4.1857 -6.4161 12 6 3.3014 -5.2706 -7.1943 13 1 2.4107 -4.8408 -7.6528 14 6 4.2139 -5.8361 -8.2845 15 6 3.4666 -6.9206 -9.0631 16 6 3.0567 -8.0434 -8.1080 17 1 3.9471 -8.4735 -7.6495 18 6 2.3099 -9.1282 -8.8868 19 8 2.0293 -10.2291 -8.0200 20 6 2.1442 -7.4779 -7.0179 21 6 2.8920 -6.3932 -6.2389 22 6 2.5130 -2.8201 -2.4158 23 6 1.5485 -2.1483 -1.4358 24 1 -0.3933 0.4418 -0.7650 25 1 1.7923 -0.5140 0.8899 26 1 1.5615 2.4678 1.2086 27 1 3.5346 1.7702 -0.0321 28 1 2.9148 0.9888 -1.8690 29 1 3.8905 -0.1997 -3.7358 30 1 1.6652 -1.7861 -4.1166 31 1 2.2178 -3.8608 -5.3907 32 1 4.8892 -4.6324 -5.8854 33 1 4.4169 -3.4298 -7.1098 34 1 5.1045 -6.2658 -7.8261 35 1 4.5055 -5.0363 -8.9652 36 1 4.1168 -7.3238 -9.8395 37 1 2.5761 -6.4905 -9.5217 38 1 2.9270 -9.4685 -9.7183 39 1 1.3747 -8.7209 -9.2712 40 1 1.5564 -10.9560 -8.4479 41 1 1.2538 -7.0478 -7.4763 42 1 1.8526 -8.2777 -6.3372 43 1 3.7827 -6.8231 -5.7804 44 1 2.2420 -5.9904 -5.4622 45 1 2.1216 -3.7960 -2.7035 46 1 3.4898 -2.9411 -1.9475 47 1 0.5355 -2.1985 -1.8350 48 1 1.5832 -2.6708 -0.4799 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14939082_15413834.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:01:56 Heat of formation + Delta-G solvation = -119.795923 kcal Electronic energy + Delta-G solvation = -26302.030572 eV Core-core repulsion = 22550.374722 eV Total energy + Delta-G solvation = -3751.655851 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 311.193 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -41.44005 -40.31832 -39.39486 -37.73086 -37.28442 -35.85730 -33.45081 -33.18080 -32.49013 -31.85045 -28.68133 -27.11541 -25.40993 -24.73391 -23.93603 -23.48616 -21.81108 -21.64934 -20.86087 -19.35326 -19.13655 -18.29826 -17.96718 -17.24214 -16.78393 -16.68280 -16.26708 -16.07955 -15.83702 -15.77033 -15.38163 -15.19555 -15.11227 -14.90090 -14.62505 -14.48467 -14.20406 -13.98726 -13.84460 -13.52077 -13.24674 -13.01086 -12.95927 -12.87305 -12.62037 -12.20062 -12.11502 -12.03730 -11.95260 -11.78243 -11.54577 -11.29568 -11.25137 -11.19496 -10.90768 -10.80903 -10.18711 -10.12491 -8.46325 -4.97789 1.32611 1.44749 1.50611 1.68439 1.87649 2.07064 2.61381 3.12971 3.46730 3.49206 3.59230 3.61289 3.65319 3.76180 3.83486 3.94993 3.96712 4.05684 4.16853 4.27360 4.30407 4.33845 4.36206 4.37739 4.43628 4.51539 4.57290 4.58957 4.64611 4.68608 4.71897 4.74903 4.81152 4.94358 4.98089 5.00946 5.06927 5.10654 5.15820 5.19231 5.26626 5.30465 5.33953 5.42434 5.54701 6.20071 6.38116 6.62572 6.76618 6.83166 7.07358 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.042 4.042 3 Si 0.670 3.330 4 C -0.280 4.280 5 C 0.142 3.858 6 N -0.732 5.732 7 C 0.137 3.863 8 C 0.511 3.489 9 O -0.531 6.531 10 N -0.724 5.724 11 C 0.123 3.877 12 C -0.099 4.099 13 H 0.079 0.921 14 C -0.110 4.110 15 C -0.112 4.112 16 C -0.089 4.089 17 H 0.078 0.922 18 C 0.078 3.922 19 O -0.574 6.574 20 C -0.110 4.110 21 C -0.116 4.116 22 C -0.128 4.128 23 C -0.050 4.050 24 H 0.375 0.625 25 H 0.103 0.897 26 H -0.258 1.258 27 H -0.261 1.261 28 H 0.132 0.868 29 H 0.409 0.591 30 H 0.092 0.908 31 H 0.403 0.597 32 H 0.070 0.930 33 H 0.070 0.930 34 H 0.068 0.932 35 H 0.069 0.931 36 H 0.067 0.933 37 H 0.065 0.935 38 H 0.045 0.955 39 H 0.045 0.955 40 H 0.380 0.620 41 H 0.060 0.940 42 H 0.071 0.929 43 H 0.066 0.934 44 H 0.062 0.938 45 H 0.078 0.922 46 H 0.075 0.925 47 H 0.069 0.931 48 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.584 -1.404 -5.797 6.958 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.155 4.155 3 Si 0.573 3.427 4 C -0.290 4.290 5 C 0.021 3.979 6 N -0.365 5.365 7 C 0.028 3.972 8 C 0.296 3.704 9 O -0.407 6.407 10 N -0.377 5.377 11 C -0.001 4.001 12 C -0.118 4.118 13 H 0.097 0.903 14 C -0.148 4.148 15 C -0.150 4.150 16 C -0.107 4.107 17 H 0.096 0.904 18 C 0.000 4.000 19 O -0.379 6.379 20 C -0.148 4.148 21 C -0.153 4.153 22 C -0.166 4.166 23 C -0.087 4.087 24 H 0.222 0.778 25 H 0.121 0.879 26 H -0.183 1.183 27 H -0.187 1.187 28 H 0.149 0.851 29 H 0.246 0.754 30 H 0.109 0.891 31 H 0.237 0.763 32 H 0.088 0.912 33 H 0.088 0.912 34 H 0.087 0.913 35 H 0.088 0.912 36 H 0.086 0.914 37 H 0.084 0.916 38 H 0.063 0.937 39 H 0.063 0.937 40 H 0.227 0.773 41 H 0.079 0.921 42 H 0.090 0.910 43 H 0.085 0.915 44 H 0.081 0.919 45 H 0.097 0.903 46 H 0.093 0.907 47 H 0.088 0.912 48 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -1.913 -0.566 -4.485 4.909 hybrid contribution -0.284 -0.945 -0.464 1.090 sum -2.197 -1.511 -4.950 5.622 Atomic orbital electron populations 1.86468 1.18009 1.81608 1.49106 1.24705 0.84648 1.08357 0.97743 0.95197 0.80834 0.79138 0.87498 1.20976 1.11154 0.97408 0.99492 1.20351 0.95396 0.95522 0.86607 1.44277 1.43748 1.20736 1.27744 1.20986 0.96007 0.85792 0.94434 1.20613 0.88698 0.79988 0.81120 1.90741 1.18635 1.62452 1.68888 1.45954 1.15302 1.37679 1.38744 1.21471 0.92602 0.95015 0.90985 1.21444 0.99172 0.95004 0.96198 0.90293 1.21468 0.98214 0.98236 0.96901 1.21502 1.00530 0.95375 0.97593 1.21173 0.99089 0.94160 0.96306 0.90383 1.22244 0.98360 0.87305 0.92062 1.86472 1.80395 1.30292 1.40771 1.21522 0.97756 0.98002 0.97478 1.21641 1.00697 0.95549 0.97443 1.21879 1.01785 0.97901 0.95083 1.19892 0.98001 0.91880 0.98906 0.77831 0.87915 1.18307 1.18672 0.85083 0.75404 0.89065 0.76259 0.91174 0.91177 0.91334 0.91247 0.91443 0.91588 0.93670 0.93672 0.77274 0.92091 0.91015 0.91540 0.91917 0.90328 0.90673 0.91210 0.90924 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.45 12.78 -35.23 -0.45 -0.90 16 2 C -0.04 -0.02 2.83 36.01 0.10 0.08 16 3 Si 0.67 -0.19 29.68 -169.99 -5.05 -5.24 16 4 C -0.28 -0.05 5.44 -101.33 -0.55 -0.60 16 5 C 0.14 -0.02 9.63 -16.08 -0.15 -0.18 16 6 N -0.73 -0.14 5.47 -55.33 -0.30 -0.44 16 7 C 0.14 -0.11 3.36 -68.51 -0.23 -0.34 16 8 C 0.51 0.39 7.10 -10.98 -0.08 0.31 16 9 O -0.53 -2.58 16.06 5.56 0.09 -2.49 16 10 N -0.72 1.29 5.28 -60.29 -0.32 0.97 16 11 C 0.12 -0.16 5.06 -4.04 -0.02 -0.18 16 12 C -0.10 0.28 2.22 -90.62 -0.20 0.08 16 13 H 0.08 -0.25 8.14 -51.92 -0.42 -0.67 16 14 C -0.11 0.27 5.20 -26.73 -0.14 0.13 16 15 C -0.11 0.27 5.20 -26.73 -0.14 0.13 16 16 C -0.09 0.11 2.43 -90.62 -0.22 -0.11 16 17 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 18 C 0.08 -0.10 6.43 37.16 0.24 0.14 16 19 O -0.57 -0.08 13.20 -35.23 -0.46 -0.54 16 20 C -0.11 0.16 5.10 -26.71 -0.14 0.02 16 21 C -0.12 0.26 5.08 -26.71 -0.14 0.13 16 22 C -0.13 0.10 5.47 -26.43 -0.14 -0.05 16 23 C -0.05 0.01 5.75 -28.10 -0.16 -0.15 16 24 H 0.37 -1.16 8.70 45.56 0.40 -0.77 16 25 H 0.10 0.15 7.96 -51.93 -0.41 -0.26 16 26 H -0.26 -0.84 7.11 56.52 0.40 -0.43 16 27 H -0.26 -0.58 7.10 56.52 0.40 -0.18 16 28 H 0.13 -0.21 4.37 -52.48 -0.23 -0.44 16 29 H 0.41 0.20 8.08 -40.82 -0.33 -0.13 16 30 H 0.09 -0.23 8.14 -51.93 -0.42 -0.66 16 31 H 0.40 -1.69 7.65 -40.82 -0.31 -2.00 16 32 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 33 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 34 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 35 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 36 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 37 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 38 H 0.05 -0.08 8.14 -51.93 -0.42 -0.51 16 39 H 0.05 -0.09 8.14 -51.92 -0.42 -0.51 16 40 H 0.38 -1.46 9.12 45.56 0.42 -1.04 16 41 H 0.06 -0.11 8.14 -51.93 -0.42 -0.53 16 42 H 0.07 0.01 7.82 -51.93 -0.41 -0.40 16 43 H 0.07 -0.08 8.14 -51.92 -0.42 -0.50 16 44 H 0.06 -0.19 7.18 -51.93 -0.37 -0.56 16 45 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 46 H 0.07 0.10 8.14 -51.93 -0.42 -0.33 16 47 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 48 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 LS Contribution 372.29 15.07 5.61 5.61 Total: 0.00 -8.17 372.29 -10.49 -18.66 By element: Atomic # 1 Polarization: -7.41 SS G_CDS: -7.64 Total: -15.04 kcal Atomic # 6 Polarization: 1.38 SS G_CDS: -1.97 Total: -0.59 kcal Atomic # 7 Polarization: 1.16 SS G_CDS: -0.62 Total: 0.54 kcal Atomic # 8 Polarization: -3.11 SS G_CDS: -0.83 Total: -3.94 kcal Atomic # 14 Polarization: -0.19 SS G_CDS: -5.05 Total: -5.24 kcal Total LS contribution 5.61 Total: 5.61 kcal Total: -8.17 -10.49 -18.66 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_15413834.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -101.133 kcal (2) G-P(sol) polarization free energy of solvation -8.172 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -109.305 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.491 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.663 kcal (6) G-S(sol) free energy of system = (1) + (5) -119.796 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds