Wall clock time and date at job start Sun Mar 7 2021 02:02:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86298 * 109.47089 * 2 1 4 4 C 1.50700 * 109.47101 * 119.99960 * 2 1 3 5 5 C 1.38269 * 119.94344 * 64.99735 * 4 2 1 6 6 C 1.38139 * 120.05748 * 180.02562 * 5 4 2 7 7 C 1.38739 * 119.94199 * 359.97438 * 6 5 4 8 8 O 1.35903 * 120.05087 * 180.02562 * 7 6 5 9 9 C 1.42910 * 116.99507 * 179.97438 * 8 7 6 10 10 C 1.52999 * 109.46729 * 180.02562 * 9 8 7 11 11 C 1.50700 * 109.46732 * 180.02562 * 10 9 8 12 12 O 1.21283 * 120.00451 * 0.02562 * 11 10 9 13 13 N 1.34774 * 119.99975 * 180.02562 * 11 10 9 14 14 C 1.46504 * 120.00039 * 180.02562 * 13 11 10 15 15 C 1.53002 * 109.47145 * 179.97438 * 14 13 11 16 16 H 1.09000 * 109.47312 * 305.00041 * 15 14 13 17 17 C 1.52997 * 109.47092 * 65.00161 * 15 14 13 18 18 C 1.52999 * 109.47592 * 180.02562 * 17 15 14 19 19 C 1.53006 * 109.46626 * 300.00035 * 18 17 15 20 20 H 1.09000 * 109.47050 * 299.99699 * 19 18 17 21 21 C 1.52999 * 109.46623 * 179.97438 * 19 18 17 22 22 O 1.42910 * 109.46729 * 174.99698 * 21 19 18 23 23 C 1.52997 * 109.47164 * 59.99702 * 19 18 17 24 24 C 1.52996 * 109.46969 * 185.00102 * 15 14 13 25 25 C 1.38728 * 119.89110 * 0.27692 * 7 6 5 26 26 C 1.38154 * 119.94006 * 359.47275 * 25 7 6 27 27 H 0.96696 * 113.99791 * 59.99623 * 1 2 3 28 28 H 1.08997 * 109.47019 * 239.99987 * 2 1 3 29 29 H 1.48498 * 110.00231 * 60.00381 * 3 2 1 30 30 H 1.48505 * 109.99767 * 181.31917 * 3 2 1 31 31 H 1.08004 * 119.97317 * 359.97438 * 5 4 2 32 32 H 1.07996 * 120.03140 * 179.97438 * 6 5 4 33 33 H 1.09001 * 109.46600 * 60.00352 * 9 8 7 34 34 H 1.08997 * 109.46901 * 300.00432 * 9 8 7 35 35 H 1.09001 * 109.47317 * 60.00760 * 10 9 8 36 36 H 1.08995 * 109.47075 * 300.00175 * 10 9 8 37 37 H 0.96997 * 120.00061 * 359.97438 * 13 11 10 38 38 H 1.09005 * 109.47220 * 60.00135 * 14 13 11 39 39 H 1.08999 * 109.47205 * 300.00241 * 14 13 11 40 40 H 1.09000 * 109.47140 * 59.99774 * 17 15 14 41 41 H 1.09002 * 109.47045 * 299.99867 * 17 15 14 42 42 H 1.08993 * 109.47839 * 180.02562 * 18 17 15 43 43 H 1.09000 * 109.47160 * 59.99666 * 18 17 15 44 44 H 1.08997 * 109.47756 * 294.99575 * 21 19 18 45 45 H 1.09001 * 109.47317 * 55.00458 * 21 19 18 46 46 H 0.96696 * 113.99442 * 179.97438 * 22 21 19 47 47 H 1.09000 * 109.47140 * 60.00051 * 23 19 18 48 48 H 1.09001 * 109.47230 * 179.97438 * 23 19 18 49 49 H 1.08992 * 109.47534 * 60.00418 * 24 15 14 50 50 H 1.08996 * 109.47134 * 299.99612 * 24 15 14 51 51 H 1.07991 * 120.02923 * 179.71599 * 25 7 6 52 52 H 1.07997 * 119.96943 * 180.23068 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.6840 -2.0605 1.3973 6 6 2.1429 -2.7139 2.5245 7 6 2.8530 -2.0144 3.4895 8 8 3.3060 -2.6552 4.5991 9 6 4.0302 -1.8720 5.5502 10 6 4.4563 -2.7587 6.7220 11 6 5.2194 -1.9328 7.7253 12 8 5.4038 -0.7512 7.5232 13 7 5.6970 -2.5071 8.8471 14 6 6.4383 -1.7040 9.8227 15 6 6.8646 -2.5907 10.9945 16 1 5.9881 -3.0844 11.4142 17 6 7.8568 -3.6457 10.5011 18 6 8.2827 -4.5328 11.6727 19 6 8.9469 -3.6718 12.7491 20 1 9.8235 -3.1781 12.3297 21 6 9.3722 -4.5588 13.9209 22 8 10.0952 -3.7758 14.8730 23 6 7.9547 -2.6168 13.2424 24 6 7.5289 -1.7294 12.0704 25 6 3.0955 -0.6587 3.3223 26 6 2.6388 -0.0110 2.1907 27 1 -0.3933 0.4417 -0.7650 28 1 1.7924 -0.5138 -0.8900 29 1 1.5616 2.4679 1.2085 30 1 3.5347 1.7702 -0.0321 31 1 1.1308 -2.6046 0.6460 32 1 1.9491 -3.7684 2.6545 33 1 3.3943 -1.0660 5.9164 34 1 4.9149 -1.4493 5.0743 35 1 5.0923 -3.5645 6.3554 36 1 3.5717 -3.1818 7.1979 37 1 5.5492 -3.4520 9.0089 38 1 5.8015 -0.8990 10.1896 39 1 7.3226 -1.2797 9.3471 40 1 8.7333 -3.1520 10.0814 41 1 7.3835 -4.2593 9.7346 42 1 8.9899 -5.2840 11.3214 43 1 7.4060 -5.0264 12.0920 44 1 8.4873 -4.9824 14.3959 45 1 10.0087 -5.3642 13.5546 46 1 10.3963 -4.2746 15.6447 47 1 7.0780 -3.1105 13.6618 48 1 8.4277 -2.0037 14.0096 49 1 6.8222 -0.9778 12.4219 50 1 8.4054 -1.2358 11.6507 51 1 3.6440 -0.1111 4.0743 52 1 2.8305 1.0435 2.0583 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14939082_4549602.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:02:12 Heat of formation + Delta-G solvation = -151.813551 kcal Electronic energy + Delta-G solvation = -29661.397214 eV Core-core repulsion = 25398.644413 eV Total energy + Delta-G solvation = -4262.752801 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.197 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -41.37611 -40.92026 -40.03936 -39.02528 -37.71049 -37.19781 -35.83161 -33.62184 -32.78723 -32.00689 -31.79915 -31.45515 -28.39408 -26.50732 -25.63880 -24.55378 -23.87829 -23.31331 -22.00924 -21.78807 -21.42460 -20.80637 -19.49454 -18.36489 -18.30771 -17.92091 -17.51626 -17.38830 -16.89064 -16.64975 -16.53177 -16.14004 -15.97994 -15.67516 -15.44465 -15.26292 -15.15926 -14.93062 -14.64361 -14.60051 -14.31185 -14.20911 -13.82620 -13.66526 -13.61304 -13.51859 -13.29013 -13.16225 -12.94469 -12.78824 -12.46124 -12.32358 -12.19494 -12.03338 -11.91339 -11.80244 -11.70648 -11.54300 -11.33136 -11.20660 -10.96219 -10.88614 -10.27464 -10.17401 -9.98743 -9.14203 -4.95001 0.32745 0.36689 1.32047 1.52928 1.66778 1.69374 2.00762 2.46846 2.68115 3.12554 3.45071 3.46388 3.51530 3.57641 3.69412 3.75817 3.80839 3.83382 3.88008 3.89190 4.02938 4.09502 4.18870 4.26061 4.30110 4.30904 4.35494 4.37021 4.38758 4.44910 4.45397 4.48594 4.53456 4.57658 4.63555 4.65708 4.76059 4.78428 4.81541 4.93284 4.97663 4.97963 5.06922 5.11573 5.19781 5.22724 5.29390 5.32105 5.35277 5.42824 5.54502 5.74420 6.32124 6.38614 6.62722 6.66117 7.08912 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.065 4.065 3 Si 0.679 3.321 4 C -0.114 4.114 5 C -0.050 4.050 6 C -0.149 4.149 7 C 0.138 3.862 8 O -0.315 6.315 9 C 0.073 3.927 10 C -0.141 4.141 11 C 0.519 3.481 12 O -0.539 6.539 13 N -0.727 5.727 14 C 0.122 3.878 15 C -0.099 4.099 16 H 0.078 0.922 17 C -0.114 4.114 18 C -0.113 4.113 19 C -0.089 4.089 20 H 0.078 0.922 21 C 0.078 3.922 22 O -0.574 6.574 23 C -0.109 4.109 24 C -0.113 4.113 25 C -0.201 4.201 26 C -0.082 4.082 27 H 0.381 0.619 28 H 0.073 0.927 29 H -0.251 1.251 30 H -0.255 1.255 31 H 0.135 0.865 32 H 0.136 0.864 33 H 0.073 0.927 34 H 0.073 0.927 35 H 0.107 0.893 36 H 0.107 0.893 37 H 0.403 0.597 38 H 0.070 0.930 39 H 0.070 0.930 40 H 0.067 0.933 41 H 0.064 0.936 42 H 0.066 0.934 43 H 0.065 0.935 44 H 0.045 0.955 45 H 0.045 0.955 46 H 0.380 0.620 47 H 0.060 0.940 48 H 0.072 0.928 49 H 0.067 0.933 50 H 0.067 0.933 51 H 0.134 0.866 52 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.183 -3.928 -0.161 3.936 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.176 4.176 3 Si 0.581 3.419 4 C -0.114 4.114 5 C -0.068 4.068 6 C -0.167 4.167 7 C 0.092 3.908 8 O -0.229 6.229 9 C -0.002 4.002 10 C -0.181 4.181 11 C 0.305 3.695 12 O -0.416 6.416 13 N -0.380 5.380 14 C -0.001 4.001 15 C -0.118 4.118 16 H 0.097 0.903 17 C -0.151 4.151 18 C -0.151 4.151 19 C -0.108 4.108 20 H 0.096 0.904 21 C 0.001 3.999 22 O -0.379 6.379 23 C -0.147 4.147 24 C -0.151 4.151 25 C -0.220 4.220 26 C -0.100 4.100 27 H 0.229 0.771 28 H 0.091 0.909 29 H -0.176 1.176 30 H -0.180 1.180 31 H 0.153 0.847 32 H 0.154 0.846 33 H 0.091 0.909 34 H 0.091 0.909 35 H 0.126 0.874 36 H 0.126 0.874 37 H 0.237 0.763 38 H 0.088 0.912 39 H 0.089 0.911 40 H 0.086 0.914 41 H 0.082 0.918 42 H 0.084 0.916 43 H 0.084 0.916 44 H 0.063 0.937 45 H 0.063 0.937 46 H 0.227 0.773 47 H 0.079 0.921 48 H 0.091 0.909 49 H 0.086 0.914 50 H 0.086 0.914 51 H 0.152 0.848 52 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges 0.765 -2.507 0.312 2.640 hybrid contribution 0.229 -1.325 0.800 1.565 sum 0.995 -3.832 1.112 4.112 Atomic orbital electron populations 1.86501 1.17351 1.81758 1.49646 1.24594 0.85577 1.10087 0.97350 0.95453 0.80807 0.78316 0.87326 1.19242 1.01572 0.94482 0.96123 1.20821 0.96228 0.93344 0.96435 1.20506 1.01643 1.00881 0.93703 1.18958 0.94209 0.90779 0.86812 1.85975 1.69103 1.38456 1.29336 1.22434 0.96366 0.93358 0.88087 1.21464 1.02227 0.99583 0.94822 1.20282 0.79128 0.87997 0.82113 1.90760 1.58043 1.16095 1.76654 1.45975 1.57044 1.13651 1.21312 1.21477 0.96289 0.93817 0.88559 1.21444 0.98988 0.96412 0.94983 0.90315 1.21589 0.99177 0.96944 0.97402 1.21515 1.00569 0.97696 0.95320 1.21177 0.98984 0.96332 0.94256 0.90360 1.22242 0.94726 0.93063 0.89917 1.86476 1.75843 1.40395 1.35194 1.21511 0.98469 0.97119 0.97555 1.21524 1.00676 0.97700 0.95167 1.21216 1.06400 0.94032 1.00307 1.20688 0.97335 0.98673 0.93257 0.77128 0.90890 1.17621 1.18022 0.84710 0.84611 0.90896 0.90914 0.87444 0.87436 0.76268 0.91163 0.91146 0.91417 0.91762 0.91559 0.91624 0.93671 0.93693 0.77278 0.92084 0.90895 0.91409 0.91435 0.84818 0.86247 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.50 12.81 -35.23 -0.45 -0.95 16 2 C -0.07 -0.05 2.79 36.01 0.10 0.05 16 3 Si 0.68 -0.07 29.85 -169.99 -5.07 -5.15 16 4 C -0.11 -0.38 5.39 -104.60 -0.56 -0.94 16 5 C -0.05 -0.13 9.68 -39.61 -0.38 -0.52 16 6 C -0.15 -0.41 9.99 -39.43 -0.39 -0.80 16 7 C 0.14 0.49 6.69 -39.22 -0.26 0.22 16 8 O -0.31 -0.85 10.14 -19.44 -0.20 -1.04 16 9 C 0.07 0.09 4.03 37.16 0.15 0.24 16 10 C -0.14 0.16 6.07 -27.88 -0.17 -0.01 16 11 C 0.52 0.50 7.83 -10.99 -0.09 0.41 16 12 O -0.54 -2.82 15.98 5.55 0.09 -2.73 16 13 N -0.73 1.05 5.28 -60.29 -0.32 0.73 16 14 C 0.12 -0.10 5.06 -4.04 -0.02 -0.12 16 15 C -0.10 0.23 2.22 -90.62 -0.20 0.03 16 16 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 17 C -0.11 0.29 5.08 -26.73 -0.14 0.15 16 18 C -0.11 0.27 5.20 -26.73 -0.14 0.13 16 19 C -0.09 0.08 2.43 -90.62 -0.22 -0.14 16 20 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 21 C 0.08 -0.08 6.43 37.16 0.24 0.16 16 22 O -0.57 -0.24 13.19 -35.23 -0.46 -0.71 16 23 C -0.11 0.08 5.10 -26.71 -0.14 -0.05 16 24 C -0.11 0.16 5.21 -26.71 -0.14 0.02 16 25 C -0.20 -0.72 9.04 -39.43 -0.36 -1.08 16 26 C -0.08 -0.31 8.66 -39.60 -0.34 -0.66 16 27 H 0.38 -1.61 8.74 45.56 0.40 -1.21 16 28 H 0.07 -0.07 7.96 -51.93 -0.41 -0.49 16 29 H -0.25 -0.80 7.05 56.52 0.40 -0.40 16 30 H -0.26 -0.62 7.11 56.52 0.40 -0.22 16 31 H 0.14 0.12 8.06 -52.48 -0.42 -0.30 16 32 H 0.14 0.14 8.06 -52.49 -0.42 -0.29 16 33 H 0.07 0.13 7.61 -51.93 -0.39 -0.26 16 34 H 0.07 0.12 7.63 -51.93 -0.40 -0.27 16 35 H 0.11 -0.29 8.14 -51.93 -0.42 -0.72 16 36 H 0.11 -0.28 8.14 -51.93 -0.42 -0.71 16 37 H 0.40 -1.64 7.66 -40.82 -0.31 -1.95 16 38 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 39 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 40 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 41 H 0.06 -0.22 7.18 -51.93 -0.37 -0.59 16 42 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 43 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 44 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 45 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 46 H 0.38 -1.36 9.12 45.56 0.42 -0.95 16 47 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 48 H 0.07 0.05 7.82 -51.93 -0.41 -0.35 16 49 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 50 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 51 H 0.13 0.33 6.30 -52.49 -0.33 0.00 16 52 H 0.12 0.39 4.86 -52.49 -0.26 0.14 16 LS Contribution 413.27 15.07 6.23 6.23 Total: 0.00 -9.80 413.27 -11.28 -21.08 By element: Atomic # 1 Polarization: -6.55 SS G_CDS: -8.03 Total: -14.58 kcal Atomic # 6 Polarization: 0.17 SS G_CDS: -3.06 Total: -2.89 kcal Atomic # 7 Polarization: 1.05 SS G_CDS: -0.32 Total: 0.73 kcal Atomic # 8 Polarization: -4.40 SS G_CDS: -1.02 Total: -5.43 kcal Atomic # 14 Polarization: -0.07 SS G_CDS: -5.07 Total: -5.15 kcal Total LS contribution 6.23 Total: 6.23 kcal Total: -9.80 -11.28 -21.08 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_4549602.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -130.734 kcal (2) G-P(sol) polarization free energy of solvation -9.797 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -140.531 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.283 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.080 kcal (6) G-S(sol) free energy of system = (1) + (5) -151.814 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds