Wall clock time and date at job start Sun Mar 7 2021 02:02:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86301 * 109.47222 * 2 1 4 4 C 1.50704 * 109.47123 * 119.99875 * 2 1 3 5 5 C 1.38250 * 119.96871 * 245.02490 * 4 2 1 6 6 C 1.38290 * 120.11062 * 180.02562 * 5 4 2 7 7 C 1.38131 * 120.04957 * 359.67603 * 6 5 4 8 8 C 1.38746 * 119.94707 * 0.59675 * 7 6 5 9 9 O 1.35900 * 120.05467 * 179.69741 * 8 7 6 10 10 C 1.42898 * 117.00172 * 359.72752 * 9 8 7 11 11 C 1.52997 * 109.47319 * 179.97438 * 10 9 8 12 12 C 1.50697 * 109.47466 * 180.02562 * 11 10 9 13 13 O 1.21288 * 120.00038 * 0.02562 * 12 11 10 14 14 N 1.34777 * 120.00369 * 180.02562 * 12 11 10 15 15 C 1.46505 * 120.00115 * 180.02562 * 14 12 11 16 16 C 1.53005 * 109.46784 * 179.97438 * 15 14 12 17 17 H 1.08998 * 109.47101 * 55.00078 * 16 15 14 18 18 C 1.53002 * 109.46544 * 174.99644 * 16 15 14 19 19 C 1.53001 * 109.46779 * 179.97438 * 18 16 15 20 20 C 1.52991 * 109.47600 * 300.00674 * 19 18 16 21 21 H 1.09008 * 109.46753 * 299.99750 * 20 19 18 22 22 C 1.53001 * 109.47600 * 180.02562 * 20 19 18 23 23 O 1.42899 * 109.47364 * 174.99899 * 22 20 19 24 24 C 1.52997 * 109.47685 * 59.99484 * 20 19 18 25 25 C 1.52992 * 109.47321 * 294.99783 * 16 15 14 26 26 C 1.38162 * 119.97406 * 64.99928 * 4 2 1 27 27 H 0.96698 * 114.00529 * 299.99692 * 1 2 3 28 28 H 1.08996 * 109.47925 * 239.99665 * 2 1 3 29 29 H 1.48499 * 110.00183 * 178.67925 * 3 2 1 30 30 H 1.48503 * 109.99550 * 300.00031 * 3 2 1 31 31 H 1.07997 * 119.94730 * 359.97411 * 5 4 2 32 32 H 1.07993 * 119.97407 * 179.97438 * 6 5 4 33 33 H 1.08010 * 120.02317 * 180.32125 * 7 6 5 34 34 H 1.09002 * 109.47259 * 300.00149 * 10 9 8 35 35 H 1.09001 * 109.47074 * 60.00171 * 10 9 8 36 36 H 1.09002 * 109.47153 * 300.00307 * 11 10 9 37 37 H 1.08998 * 109.47533 * 59.99936 * 11 10 9 38 38 H 0.97003 * 119.99640 * 0.02562 * 14 12 11 39 39 H 1.09002 * 109.46801 * 299.99526 * 15 14 12 40 40 H 1.08992 * 109.46823 * 59.99976 * 15 14 12 41 41 H 1.09000 * 109.47280 * 300.00321 * 18 16 15 42 42 H 1.08998 * 109.47067 * 60.00413 * 18 16 15 43 43 H 1.09008 * 109.46864 * 60.00356 * 19 18 16 44 44 H 1.08998 * 109.46991 * 180.02562 * 19 18 16 45 45 H 1.09002 * 109.46783 * 294.99663 * 22 20 19 46 46 H 1.09005 * 109.46990 * 54.99798 * 22 20 19 47 47 H 0.96697 * 113.99511 * 180.02562 * 23 22 20 48 48 H 1.09008 * 109.46808 * 60.00299 * 24 20 19 49 49 H 1.09000 * 109.47820 * 180.02562 * 24 20 19 50 50 H 1.08998 * 109.47273 * 300.00189 * 25 16 15 51 51 H 1.09006 * 109.47048 * 59.99993 * 25 16 15 52 52 H 1.07998 * 120.02891 * 0.04929 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6382 -0.0114 2.1912 6 6 3.1010 -0.6605 3.3212 7 6 2.8520 -2.0079 3.4958 8 6 2.1476 -2.7128 2.5304 9 8 1.9067 -4.0399 2.6969 10 6 2.4130 -4.6468 3.8875 11 6 2.0458 -6.1320 3.8988 12 6 2.5792 -6.7719 5.1545 13 8 3.1923 -6.1055 5.9614 14 7 2.3749 -8.0846 5.3811 15 6 2.8930 -8.7066 6.6023 16 6 2.5258 -10.1918 6.6134 17 1 2.8871 -10.6623 5.6990 18 6 3.1719 -10.8677 7.8245 19 6 2.8042 -12.3529 7.8360 20 6 1.2838 -12.5013 7.9199 21 1 0.9227 -12.0305 8.8344 22 6 0.9161 -13.9864 7.9321 23 8 -0.4925 -14.1268 8.1275 24 6 0.6377 -11.8253 6.7090 25 6 1.0054 -10.3407 6.6971 26 6 1.6845 -2.0595 1.3978 27 1 -0.3934 0.4416 0.7650 28 1 1.7924 -0.5138 -0.8899 29 1 3.5346 1.7703 0.0322 30 1 1.5614 2.4678 -1.2085 31 1 2.8302 1.0430 2.0586 32 1 3.6534 -0.1124 4.0701 33 1 3.2092 -2.5133 4.3810 34 1 3.4974 -4.5400 3.9168 35 1 1.9761 -4.1582 4.7584 36 1 0.9613 -6.2383 3.8696 37 1 2.4822 -6.6209 3.0279 38 1 1.8848 -8.6177 4.7356 39 1 3.9773 -8.5998 6.6324 40 1 2.4553 -8.2179 7.4726 41 1 4.2551 -10.7616 7.7648 42 1 2.8105 -10.3973 8.7389 43 1 3.1652 -12.8237 6.9216 44 1 3.2641 -12.8343 8.6990 45 1 1.1978 -14.4382 6.9810 46 1 1.4469 -14.4854 8.7429 47 1 -0.7973 -15.0443 8.1464 48 1 0.9987 -12.2961 5.7945 49 1 -0.4456 -11.9307 6.7689 50 1 0.6440 -9.8702 7.6115 51 1 0.5451 -9.8591 5.8343 52 1 1.1325 -2.6051 0.6468 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14939082_4549614.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:02:15 Heat of formation + Delta-G solvation = -154.094932 kcal Electronic energy + Delta-G solvation = -29716.639046 eV Core-core repulsion = 25453.787316 eV Total energy + Delta-G solvation = -4262.851729 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.197 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -41.36908 -40.91971 -40.03945 -39.05695 -37.70591 -37.21927 -35.83318 -33.55875 -32.65630 -32.40820 -31.85123 -30.79036 -28.33620 -26.95363 -25.61218 -24.39048 -23.75326 -23.61249 -22.02071 -21.79866 -21.36913 -20.81114 -19.30639 -18.30448 -18.13421 -17.63812 -17.50554 -17.20517 -17.02916 -16.71731 -16.61091 -16.15832 -16.02603 -15.94519 -15.34691 -15.32679 -15.03186 -14.86044 -14.83935 -14.55374 -14.34102 -14.23876 -14.09475 -13.80809 -13.49856 -13.24266 -13.22269 -12.98537 -12.87351 -12.79061 -12.60254 -12.33630 -12.19280 -12.02407 -11.93969 -11.78540 -11.58453 -11.53952 -11.30368 -11.19038 -10.96974 -10.88663 -10.44848 -10.16116 -9.87831 -9.19496 -5.00129 0.26502 0.45725 1.30228 1.54167 1.66960 1.71754 2.00085 2.49027 2.72779 3.13241 3.48397 3.49186 3.52756 3.59316 3.62941 3.68359 3.82889 3.85410 3.92921 3.96128 4.07187 4.09361 4.17413 4.24718 4.30545 4.31577 4.34632 4.36420 4.38195 4.44337 4.52302 4.53475 4.57082 4.59918 4.62263 4.65989 4.73794 4.74281 4.81706 4.95004 5.01743 5.02135 5.07412 5.11335 5.16998 5.30891 5.31681 5.34667 5.42674 5.43068 5.48956 5.73312 6.33847 6.42167 6.59364 6.62659 7.10014 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.069 4.069 3 Si 0.691 3.309 4 C -0.083 4.083 5 C -0.154 4.154 6 C -0.073 4.073 7 C -0.202 4.202 8 C 0.133 3.867 9 O -0.316 6.316 10 C 0.075 3.925 11 C -0.142 4.142 12 C 0.519 3.481 13 O -0.539 6.539 14 N -0.727 5.727 15 C 0.122 3.878 16 C -0.100 4.100 17 H 0.078 0.922 18 C -0.110 4.110 19 C -0.112 4.112 20 C -0.089 4.089 21 H 0.078 0.922 22 C 0.078 3.922 23 O -0.574 6.574 24 C -0.110 4.110 25 C -0.116 4.116 26 C -0.126 4.126 27 H 0.380 0.620 28 H 0.114 0.886 29 H -0.258 1.258 30 H -0.255 1.255 31 H 0.128 0.872 32 H 0.131 0.869 33 H 0.133 0.867 34 H 0.072 0.928 35 H 0.073 0.927 36 H 0.107 0.893 37 H 0.107 0.893 38 H 0.403 0.597 39 H 0.070 0.930 40 H 0.070 0.930 41 H 0.069 0.931 42 H 0.068 0.932 43 H 0.065 0.935 44 H 0.067 0.933 45 H 0.045 0.955 46 H 0.045 0.955 47 H 0.380 0.620 48 H 0.060 0.940 49 H 0.071 0.929 50 H 0.066 0.934 51 H 0.062 0.938 52 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.212 -3.532 1.720 3.934 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.180 4.180 3 Si 0.592 3.408 4 C -0.083 4.083 5 C -0.172 4.172 6 C -0.091 4.091 7 C -0.221 4.221 8 C 0.087 3.913 9 O -0.230 6.230 10 C -0.001 4.001 11 C -0.182 4.182 12 C 0.305 3.695 13 O -0.416 6.416 14 N -0.380 5.380 15 C -0.001 4.001 16 C -0.119 4.119 17 H 0.097 0.903 18 C -0.148 4.148 19 C -0.150 4.150 20 C -0.107 4.107 21 H 0.096 0.904 22 C 0.000 4.000 23 O -0.379 6.379 24 C -0.148 4.148 25 C -0.153 4.153 26 C -0.144 4.144 27 H 0.227 0.773 28 H 0.132 0.868 29 H -0.182 1.182 30 H -0.180 1.180 31 H 0.146 0.854 32 H 0.149 0.851 33 H 0.150 0.850 34 H 0.091 0.909 35 H 0.091 0.909 36 H 0.126 0.874 37 H 0.125 0.875 38 H 0.238 0.762 39 H 0.088 0.912 40 H 0.089 0.911 41 H 0.088 0.912 42 H 0.087 0.913 43 H 0.084 0.916 44 H 0.086 0.914 45 H 0.063 0.937 46 H 0.063 0.937 47 H 0.227 0.773 48 H 0.079 0.921 49 H 0.090 0.910 50 H 0.085 0.915 51 H 0.081 0.919 52 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 0.748 -2.256 1.225 2.674 hybrid contribution 0.037 -1.662 -0.221 1.677 sum 0.784 -3.918 1.004 4.120 Atomic orbital electron populations 1.86510 1.16944 1.81738 1.49217 1.25105 0.85345 1.10225 0.97309 0.94647 0.81114 0.77915 0.87088 1.20127 0.98002 0.93705 0.96479 1.20907 1.01631 0.99450 0.95191 1.20935 0.97496 0.93710 0.96973 1.21401 1.04220 0.95984 1.00500 1.18961 0.95139 0.82661 0.94502 1.85976 1.74461 1.20258 1.42329 1.22414 0.99657 0.91840 0.86173 1.21468 1.04286 0.95059 0.97362 1.20279 0.79613 0.82091 0.87482 1.90756 1.40856 1.62462 1.47531 1.45977 1.58254 1.09631 1.24116 1.21468 0.99397 0.92300 0.86943 1.21445 0.96496 0.93957 0.99961 0.90334 1.21470 1.00501 0.95117 0.97728 1.21501 0.94582 0.96496 1.02426 1.21175 0.95316 0.94279 0.99971 0.90363 1.22244 0.81674 0.96710 0.99338 1.86471 1.23085 1.32142 1.96228 1.21506 1.01191 0.94643 0.97417 1.21622 0.94512 0.96854 1.02345 1.20242 1.03224 0.93711 0.97246 0.77316 0.86814 1.18235 1.17968 0.85426 0.85129 0.84958 0.90948 0.90878 0.87447 0.87504 0.76239 0.91193 0.91149 0.91240 0.91321 0.91611 0.91434 0.93683 0.93661 0.77280 0.92125 0.91017 0.91533 0.91915 0.84886 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.48 12.83 -35.23 -0.45 -0.94 16 2 C -0.07 -0.03 2.80 36.01 0.10 0.07 16 3 Si 0.69 -0.40 29.80 -169.99 -5.07 -5.47 16 4 C -0.08 -0.10 5.35 -104.64 -0.56 -0.66 16 5 C -0.15 -0.05 8.67 -39.56 -0.34 -0.40 16 6 C -0.07 -0.04 10.04 -39.60 -0.40 -0.44 16 7 C -0.20 -0.31 9.04 -39.43 -0.36 -0.67 16 8 C 0.13 0.34 6.69 -39.22 -0.26 0.08 16 9 O -0.32 -0.71 10.14 -19.43 -0.20 -0.91 16 10 C 0.07 0.05 4.03 37.16 0.15 0.20 16 11 C -0.14 0.20 6.07 -27.89 -0.17 0.03 16 12 C 0.52 0.33 7.83 -10.99 -0.09 0.25 16 13 O -0.54 -2.54 15.98 5.55 0.09 -2.45 16 14 N -0.73 1.16 5.28 -60.29 -0.32 0.84 16 15 C 0.12 -0.14 5.07 -4.04 -0.02 -0.16 16 16 C -0.10 0.25 2.23 -90.62 -0.20 0.05 16 17 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 18 C -0.11 0.25 5.20 -26.73 -0.14 0.12 16 19 C -0.11 0.25 5.20 -26.74 -0.14 0.11 16 20 C -0.09 0.10 2.43 -90.63 -0.22 -0.12 16 21 H 0.08 0.01 8.14 -51.92 -0.42 -0.41 16 22 C 0.08 -0.09 6.43 37.16 0.24 0.15 16 23 O -0.57 -0.14 13.20 -35.23 -0.46 -0.60 16 24 C -0.11 0.13 5.10 -26.76 -0.14 0.00 16 25 C -0.12 0.24 5.07 -26.76 -0.14 0.10 16 26 C -0.13 -0.30 9.62 -39.43 -0.38 -0.68 16 27 H 0.38 -1.13 8.70 45.56 0.40 -0.74 16 28 H 0.11 0.10 7.96 -51.93 -0.41 -0.32 16 29 H -0.26 -0.47 7.11 56.52 0.40 -0.06 16 30 H -0.25 -0.65 7.11 56.52 0.40 -0.25 16 31 H 0.13 -0.22 4.90 -52.49 -0.26 -0.48 16 32 H 0.13 -0.21 8.06 -52.49 -0.42 -0.63 16 33 H 0.13 0.08 6.30 -52.48 -0.33 -0.25 16 34 H 0.07 0.08 7.63 -51.93 -0.40 -0.32 16 35 H 0.07 0.07 7.61 -51.93 -0.39 -0.32 16 36 H 0.11 -0.30 8.14 -51.93 -0.42 -0.72 16 37 H 0.11 -0.30 8.14 -51.93 -0.42 -0.72 16 38 H 0.40 -1.62 7.66 -40.82 -0.31 -1.93 16 39 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 40 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 41 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 42 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 43 H 0.07 -0.16 8.14 -51.92 -0.42 -0.58 16 44 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 45 H 0.04 -0.08 8.14 -51.93 -0.42 -0.51 16 46 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 47 H 0.38 -1.42 9.12 45.56 0.42 -1.00 16 48 H 0.06 -0.09 8.14 -51.92 -0.42 -0.51 16 49 H 0.07 0.02 7.82 -51.93 -0.41 -0.38 16 50 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 51 H 0.06 -0.17 7.18 -51.93 -0.37 -0.54 16 52 H 0.13 0.30 8.06 -52.49 -0.42 -0.12 16 LS Contribution 413.29 15.07 6.23 6.23 Total: 0.00 -9.01 413.29 -11.27 -20.29 By element: Atomic # 1 Polarization: -6.99 SS G_CDS: -8.03 Total: -15.02 kcal Atomic # 6 Polarization: 1.09 SS G_CDS: -3.06 Total: -1.96 kcal Atomic # 7 Polarization: 1.16 SS G_CDS: -0.32 Total: 0.84 kcal Atomic # 8 Polarization: -3.88 SS G_CDS: -1.03 Total: -4.90 kcal Atomic # 14 Polarization: -0.40 SS G_CDS: -5.07 Total: -5.47 kcal Total LS contribution 6.23 Total: 6.23 kcal Total: -9.01 -11.27 -20.29 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_4549614.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -133.808 kcal (2) G-P(sol) polarization free energy of solvation -9.015 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -142.823 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.272 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.287 kcal (6) G-S(sol) free energy of system = (1) + (5) -154.095 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds