Wall clock time and date at job start Sun Mar 7 2021 02:02:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86298 * 109.47310 * 2 1 4 4 C 1.50703 * 109.47203 * 239.99841 * 2 1 3 5 5 C 1.38244 * 119.94435 * 120.02176 * 4 2 1 6 6 C 1.38164 * 120.05549 * 179.72932 * 5 4 2 7 7 C 1.38708 * 119.94430 * 0.52196 * 6 5 4 8 8 O 1.35901 * 120.05836 * 179.74815 * 7 6 5 9 9 C 1.42899 * 116.99988 * 359.72927 * 8 7 6 10 10 C 1.50700 * 109.47143 * 179.97438 * 9 8 7 11 11 O 1.21283 * 119.99803 * 359.97438 * 10 9 8 12 12 N 1.34777 * 119.99675 * 180.27800 * 10 9 8 13 13 C 1.46497 * 119.99525 * 179.72583 * 12 10 9 14 14 C 1.52999 * 109.46992 * 179.97438 * 13 12 10 15 15 H 1.08999 * 109.47090 * 54.99784 * 14 13 12 16 16 C 1.52999 * 109.47323 * 175.00101 * 14 13 12 17 17 C 1.52999 * 109.47323 * 179.97438 * 16 14 13 18 18 C 1.52996 * 109.47227 * 299.99913 * 17 16 14 19 19 H 1.09007 * 109.47232 * 299.99913 * 18 17 16 20 20 C 1.53005 * 109.47347 * 179.97438 * 18 17 16 21 21 O 1.42895 * 109.46888 * 174.99923 * 20 18 17 22 22 C 1.53005 * 109.47365 * 59.99951 * 18 17 16 23 23 C 1.53005 * 109.47116 * 294.99847 * 14 13 12 24 24 C 1.38755 * 119.88691 * 359.48177 * 7 6 5 25 25 N 1.48002 * 120.03008 * 180.23018 * 24 7 6 26 26 O 1.21798 * 120.00206 * 179.97438 * 25 24 7 27 27 O 1.21807 * 119.99946 * 359.97438 * 25 24 7 28 28 C 1.38126 * 119.94520 * 0.24370 * 24 7 6 29 29 H 0.96704 * 113.99657 * 59.99743 * 1 2 3 30 30 H 1.09005 * 109.47417 * 119.99590 * 2 1 3 31 31 H 1.48510 * 109.99986 * 298.68146 * 3 2 1 32 32 H 1.48502 * 110.00089 * 59.99686 * 3 2 1 33 33 H 1.07998 * 119.97421 * 359.97425 * 5 4 2 34 34 H 1.07999 * 120.03109 * 180.25858 * 6 5 4 35 35 H 1.09009 * 109.46798 * 59.99543 * 9 8 7 36 36 H 1.08998 * 109.46844 * 300.00048 * 9 8 7 37 37 H 0.97000 * 119.99894 * 359.71837 * 12 10 9 38 38 H 1.08995 * 109.47421 * 299.99467 * 13 12 10 39 39 H 1.09001 * 109.47621 * 60.00103 * 13 12 10 40 40 H 1.08998 * 109.47063 * 300.00207 * 16 14 13 41 41 H 1.08999 * 109.47296 * 59.99809 * 16 14 13 42 42 H 1.08999 * 109.47090 * 59.99683 * 17 16 14 43 43 H 1.09001 * 109.47114 * 179.97438 * 17 16 14 44 44 H 1.08991 * 109.46855 * 294.99902 * 20 18 17 45 45 H 1.08996 * 109.46830 * 55.00150 * 20 18 17 46 46 H 0.96703 * 114.00002 * 180.02562 * 21 20 18 47 47 H 1.09000 * 109.46810 * 59.99411 * 22 18 17 48 48 H 1.08993 * 109.47342 * 180.02562 * 22 18 17 49 49 H 1.08999 * 109.47089 * 299.99937 * 23 14 13 50 50 H 1.09001 * 109.46783 * 60.00198 * 23 14 13 51 51 H 1.07997 * 119.97254 * 180.02562 * 28 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2305 5 6 2.7265 -0.0376 -2.1395 6 6 3.1929 -0.6884 -3.2655 7 6 2.8539 -2.0147 -3.4890 8 8 3.3072 -2.6555 -4.5984 9 6 4.1240 -1.9004 -5.4955 10 6 4.5298 -2.7696 -6.6578 11 8 4.1566 -3.9223 -6.7123 12 7 5.3124 -2.2677 -7.6336 13 6 5.7117 -3.1144 -8.7604 14 6 6.5904 -2.3075 -9.7183 15 1 7.4336 -1.8866 -9.1707 16 6 7.1093 -3.2235 -10.8285 17 6 7.9875 -2.4164 -11.7868 18 6 7.1630 -1.2845 -12.4033 19 1 6.3198 -1.7058 -12.9507 20 6 8.0414 -0.4770 -13.3612 21 8 7.2440 0.5062 -14.0242 22 6 6.6440 -0.3684 -11.2932 23 6 5.7664 -1.1753 -10.3349 24 6 2.0557 -2.6877 -2.5751 25 7 1.6962 -4.1044 -2.8079 26 8 0.9959 -4.6949 -2.0052 27 8 2.1007 -4.6799 -3.8023 28 6 1.5966 -2.0344 -1.4481 29 1 -0.3933 0.4418 -0.7651 30 1 1.7924 -0.5138 0.8900 31 1 1.5879 2.4586 -1.2243 32 1 1.5615 2.4679 1.2085 33 1 2.9865 0.9963 -1.9673 34 1 3.8175 -0.1636 -3.9732 35 1 5.0155 -1.5551 -4.9718 36 1 3.5625 -1.0413 -5.8624 37 1 5.6111 -1.3459 -7.5897 38 1 6.2715 -3.9729 -8.3893 39 1 4.8228 -3.4607 -9.2877 40 1 7.6963 -4.0301 -10.3893 41 1 6.2661 -3.6444 -11.3762 42 1 8.8307 -1.9951 -11.2395 43 1 8.3576 -3.0691 -12.5775 44 1 8.8337 0.0167 -12.7987 45 1 8.4828 -1.1455 -14.1003 46 1 7.7366 1.0562 -14.6487 47 1 7.4873 0.0527 -10.7458 48 1 6.0563 0.4376 -11.7323 49 1 4.9232 -1.5962 -10.8826 50 1 5.3967 -0.5227 -9.5440 51 1 0.9756 -2.5579 -0.7363 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14939082_4549638.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:02:43 Heat of formation + Delta-G solvation = -135.917419 kcal Electronic energy + Delta-G solvation = -34766.025437 eV Core-core repulsion = 29828.483127 eV Total energy + Delta-G solvation = -4937.542310 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.176 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -43.01577 -41.76102 -40.94459 -40.15849 -39.41026 -37.75670 -37.58779 -37.11725 -35.85206 -33.55493 -33.04603 -32.38216 -31.88275 -30.31838 -27.95067 -27.58265 -26.69085 -24.93452 -24.08818 -23.72862 -22.80685 -21.84469 -21.70408 -20.88620 -20.46748 -19.44555 -19.25339 -18.55549 -18.34471 -18.33472 -18.29106 -17.69264 -17.25294 -16.93122 -16.65426 -16.53480 -16.28053 -16.04555 -15.93481 -15.75312 -15.26620 -15.21131 -15.02696 -14.90035 -14.70483 -14.24350 -14.09885 -13.87649 -13.82906 -13.52122 -13.30383 -13.26462 -12.97084 -12.66411 -12.54738 -12.53378 -12.21808 -12.19296 -12.05219 -12.01839 -11.84572 -11.72770 -11.56698 -11.32253 -11.21846 -10.97726 -10.96015 -10.90838 -10.89554 -10.22340 -9.91653 -5.22675 -1.12999 -0.38378 0.38348 0.53696 1.00013 1.09551 1.32589 1.43398 1.75101 1.92914 2.22206 2.96774 3.02276 3.10966 3.15525 3.22130 3.40367 3.46406 3.52784 3.56333 3.57290 3.60213 3.63821 3.70017 3.93108 4.03280 4.14085 4.15388 4.17533 4.28552 4.31754 4.33389 4.35845 4.41207 4.43063 4.49262 4.55670 4.63243 4.67208 4.71542 4.78648 4.92432 4.93336 4.98713 5.04838 5.08437 5.12781 5.23940 5.30902 5.39664 5.44413 5.70907 6.15195 6.25196 6.60270 6.94255 7.04160 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.525 6.525 2 C -0.072 4.072 3 Si 0.687 3.313 4 C -0.156 4.156 5 C -0.024 4.024 6 C -0.210 4.210 7 C 0.200 3.800 8 O -0.253 6.253 9 C 0.031 3.969 10 C 0.512 3.488 11 O -0.496 6.496 12 N -0.726 5.726 13 C 0.125 3.875 14 C -0.099 4.099 15 H 0.079 0.921 16 C -0.111 4.111 17 C -0.112 4.112 18 C -0.089 4.089 19 H 0.078 0.922 20 C 0.078 3.922 21 O -0.574 6.574 22 C -0.110 4.110 23 C -0.116 4.116 24 C -0.076 4.076 25 N 0.028 4.972 26 O -0.177 6.177 27 O -0.118 6.118 28 C 0.009 3.991 29 H 0.378 0.622 30 H 0.126 0.874 31 H -0.256 1.256 32 H -0.251 1.251 33 H 0.149 0.851 34 H 0.157 0.843 35 H 0.102 0.898 36 H 0.101 0.899 37 H 0.401 0.599 38 H 0.073 0.927 39 H 0.072 0.928 40 H 0.070 0.930 41 H 0.069 0.931 42 H 0.065 0.935 43 H 0.067 0.933 44 H 0.045 0.955 45 H 0.045 0.955 46 H 0.380 0.620 47 H 0.060 0.940 48 H 0.071 0.929 49 H 0.067 0.933 50 H 0.061 0.939 51 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.039 9.799 -2.284 12.879 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.331 6.331 2 C -0.182 4.182 3 Si 0.587 3.413 4 C -0.158 4.158 5 C -0.042 4.042 6 C -0.229 4.229 7 C 0.150 3.850 8 O -0.162 6.162 9 C -0.048 4.048 10 C 0.295 3.705 11 O -0.368 6.368 12 N -0.381 5.381 13 C 0.002 3.998 14 C -0.118 4.118 15 H 0.097 0.903 16 C -0.149 4.149 17 C -0.150 4.150 18 C -0.108 4.108 19 H 0.097 0.903 20 C 0.000 4.000 21 O -0.380 6.380 22 C -0.147 4.147 23 C -0.154 4.154 24 C -0.160 4.160 25 N 0.548 4.452 26 O -0.386 6.386 27 O -0.342 6.342 28 C -0.010 4.010 29 H 0.226 0.774 30 H 0.144 0.856 31 H -0.181 1.181 32 H -0.175 1.175 33 H 0.166 0.834 34 H 0.174 0.826 35 H 0.120 0.880 36 H 0.119 0.881 37 H 0.236 0.764 38 H 0.091 0.909 39 H 0.091 0.909 40 H 0.089 0.911 41 H 0.088 0.912 42 H 0.084 0.916 43 H 0.086 0.914 44 H 0.063 0.937 45 H 0.064 0.936 46 H 0.227 0.773 47 H 0.079 0.921 48 H 0.089 0.911 49 H 0.085 0.915 50 H 0.080 0.920 51 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges 7.268 9.638 -1.309 12.142 hybrid contribution -0.401 0.399 -0.979 1.131 sum 6.867 10.038 -2.288 12.375 Atomic orbital electron populations 1.86659 1.17226 1.79837 1.49412 1.25074 0.84346 1.11168 0.97583 0.95183 0.91250 0.73767 0.81053 1.20252 1.02310 0.93897 0.99310 1.21260 0.91765 0.99922 0.91241 1.21268 1.07087 0.92685 1.01829 1.18702 0.89866 0.90795 0.85598 1.86506 1.62790 1.37512 1.29430 1.22739 0.96315 0.94924 0.90807 1.19796 0.79471 0.88167 0.83047 1.90873 1.52434 1.17087 1.76439 1.45798 1.52599 1.16137 1.23595 1.21493 0.99116 0.93274 0.85949 1.21445 0.98077 0.96304 0.95959 0.90289 1.21472 0.99919 0.97554 0.95928 1.21500 0.98062 0.96637 0.98797 1.21180 0.98646 0.95304 0.95628 0.90333 1.22243 0.92947 0.90251 0.94532 1.86470 1.39932 1.50679 1.60870 1.21506 0.99490 0.97938 0.95812 1.21631 0.98377 0.96646 0.98702 1.20588 1.10589 0.84067 1.00761 1.43342 0.99191 1.02283 1.00351 1.94556 1.35252 1.66676 1.42081 1.94703 1.54720 1.67569 1.17168 1.20840 0.93478 0.93560 0.93079 0.77416 0.85615 1.18114 1.17498 0.83358 0.82594 0.87984 0.88118 0.76442 0.90906 0.90922 0.91134 0.91244 0.91615 0.91397 0.93692 0.93642 0.77273 0.92136 0.91051 0.91463 0.92024 0.81809 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.32 12.77 -35.23 -0.45 -0.13 16 2 C -0.07 0.19 2.82 36.01 0.10 0.29 16 3 Si 0.69 -2.56 29.78 -169.99 -5.06 -7.62 16 4 C -0.16 0.33 5.39 -104.60 -0.56 -0.23 16 5 C -0.02 0.09 8.66 -39.61 -0.34 -0.25 16 6 C -0.21 0.71 9.04 -39.44 -0.36 0.35 16 7 C 0.20 0.14 6.67 -39.22 -0.26 -0.12 16 8 O -0.25 -0.57 7.68 -49.78 -0.38 -0.95 16 9 C 0.03 -0.08 5.22 36.01 0.19 0.11 16 10 C 0.51 0.34 7.91 -10.98 -0.09 0.25 16 11 O -0.50 -3.19 16.50 -14.36 -0.24 -3.42 16 12 N -0.73 1.86 5.28 -60.30 -0.32 1.54 16 13 C 0.12 -0.20 5.06 -4.04 -0.02 -0.22 16 14 C -0.10 0.32 2.23 -90.62 -0.20 0.12 16 15 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 16 C -0.11 0.30 5.20 -26.73 -0.14 0.16 16 17 C -0.11 0.30 5.20 -26.73 -0.14 0.16 16 18 C -0.09 0.14 2.43 -90.62 -0.22 -0.08 16 19 H 0.08 -0.02 8.14 -51.93 -0.42 -0.45 16 20 C 0.08 -0.12 6.43 37.16 0.24 0.12 16 21 O -0.57 0.11 13.19 -35.23 -0.46 -0.35 16 22 C -0.11 0.22 5.10 -26.75 -0.14 0.08 16 23 C -0.12 0.34 5.07 -26.75 -0.14 0.20 16 24 C -0.08 -0.21 6.87 -79.81 -0.55 -0.76 16 25 N 0.03 0.19 4.45 34.03 0.15 0.34 16 26 O -0.18 -1.30 18.45 -29.46 -0.54 -1.85 16 27 O -0.12 -1.03 17.24 -36.49 -0.63 -1.66 16 28 C 0.01 0.00 9.12 -39.61 -0.36 -0.36 16 29 H 0.38 -1.34 8.70 45.56 0.40 -0.94 16 30 H 0.13 -0.41 7.96 -51.93 -0.41 -0.82 16 31 H -0.26 0.57 7.11 56.52 0.40 0.97 16 32 H -0.25 -0.03 7.11 56.52 0.40 0.37 16 33 H 0.15 -0.98 4.87 -52.49 -0.26 -1.23 16 34 H 0.16 -1.09 6.30 -52.49 -0.33 -1.42 16 35 H 0.10 -0.60 7.65 -51.92 -0.40 -1.00 16 36 H 0.10 -0.57 7.67 -51.93 -0.40 -0.97 16 37 H 0.40 -2.33 7.66 -40.82 -0.31 -2.64 16 38 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 39 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 40 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 41 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 42 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 43 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 44 H 0.04 -0.11 8.14 -51.93 -0.42 -0.53 16 45 H 0.05 -0.10 8.14 -51.93 -0.42 -0.52 16 46 H 0.38 -1.58 9.12 45.56 0.42 -1.16 16 47 H 0.06 -0.14 8.14 -51.93 -0.42 -0.56 16 48 H 0.07 -0.03 7.82 -51.93 -0.41 -0.44 16 49 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 50 H 0.06 -0.24 7.18 -51.93 -0.37 -0.61 16 51 H 0.16 0.09 7.61 -52.49 -0.40 -0.31 16 LS Contribution 418.23 15.07 6.30 6.30 Total: 0.00 -13.45 418.23 -11.36 -24.81 By element: Atomic # 1 Polarization: -10.09 SS G_CDS: -6.75 Total: -16.84 kcal Atomic # 6 Polarization: 2.81 SS G_CDS: -2.99 Total: -0.17 kcal Atomic # 7 Polarization: 2.05 SS G_CDS: -0.17 Total: 1.88 kcal Atomic # 8 Polarization: -5.65 SS G_CDS: -2.71 Total: -8.36 kcal Atomic # 14 Polarization: -2.56 SS G_CDS: -5.06 Total: -7.62 kcal Total LS contribution 6.30 Total: 6.30 kcal Total: -13.45 -11.36 -24.81 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_4549638.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -111.108 kcal (2) G-P(sol) polarization free energy of solvation -13.445 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -124.553 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.364 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.810 kcal (6) G-S(sol) free energy of system = (1) + (5) -135.917 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds