Wall clock time and date at job start Sun Mar 7 2021 02:02:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86297 * 109.47114 * 2 1 4 4 C 1.50701 * 109.47101 * 119.99474 * 2 1 3 5 5 C 1.38239 * 119.97685 * 245.02113 * 4 2 1 6 6 C 1.38288 * 120.11592 * 179.97438 * 5 4 2 7 7 C 1.38121 * 120.05209 * 0.02562 * 6 5 4 8 8 C 1.38755 * 119.94685 * 0.02562 * 7 6 5 9 9 O 1.35898 * 120.05301 * 180.02562 * 8 7 6 10 10 C 1.42899 * 117.00413 * 0.02562 * 9 8 7 11 11 C 1.50698 * 109.47248 * 179.97438 * 10 9 8 12 12 O 1.21281 * 120.00227 * 0.02562 * 11 10 9 13 13 N 1.34773 * 120.00068 * 179.97438 * 11 10 9 14 14 C 1.46505 * 119.99938 * 179.97438 * 13 11 10 15 15 C 1.53002 * 109.47022 * 180.02562 * 14 13 11 16 16 H 1.08999 * 109.47134 * 55.00429 * 15 14 13 17 17 C 1.52998 * 109.47377 * 175.00253 * 15 14 13 18 18 C 1.52997 * 109.47725 * 180.02562 * 17 15 14 19 19 C 1.53005 * 109.46712 * 300.00273 * 18 17 15 20 20 H 1.08999 * 109.46979 * 299.99250 * 19 18 17 21 21 C 1.53002 * 109.46844 * 179.97438 * 19 18 17 22 22 O 1.42902 * 109.46914 * 174.99441 * 21 19 18 23 23 C 1.52998 * 109.47248 * 59.99435 * 19 18 17 24 24 C 1.52993 * 109.47211 * 299.99898 * 23 19 18 25 25 C 1.38170 * 119.97133 * 65.00303 * 4 2 1 26 26 H 0.96695 * 114.00073 * 300.00025 * 1 2 3 27 27 H 1.08998 * 109.47353 * 239.99764 * 2 1 3 28 28 H 1.48501 * 109.99802 * 299.99927 * 3 2 1 29 29 H 1.48501 * 110.00347 * 61.31377 * 3 2 1 30 30 H 1.08000 * 119.94311 * 359.97438 * 5 4 2 31 31 H 1.08001 * 119.97262 * 180.02562 * 6 5 4 32 32 H 1.08002 * 120.02567 * 180.26919 * 7 6 5 33 33 H 1.09007 * 109.46508 * 299.99479 * 10 9 8 34 34 H 1.08993 * 109.47492 * 59.99803 * 10 9 8 35 35 H 0.96994 * 120.00330 * 0.02562 * 13 11 10 36 36 H 1.08998 * 109.47525 * 300.00261 * 14 13 11 37 37 H 1.09001 * 109.47031 * 60.00956 * 14 13 11 38 38 H 1.09007 * 109.46935 * 300.00264 * 17 15 14 39 39 H 1.09006 * 109.47070 * 59.99642 * 17 15 14 40 40 H 1.09006 * 109.46964 * 59.99256 * 18 17 15 41 41 H 1.08993 * 109.47226 * 179.97438 * 18 17 15 42 42 H 1.08994 * 109.47315 * 294.99590 * 21 19 18 43 43 H 1.09006 * 109.46985 * 55.00100 * 21 19 18 44 44 H 0.96700 * 114.00134 * 180.02562 * 22 21 19 45 45 H 1.08999 * 109.46845 * 60.00311 * 23 19 18 46 46 H 1.09007 * 109.46935 * 180.02562 * 23 19 18 47 47 H 1.08999 * 109.47553 * 299.99979 * 24 23 19 48 48 H 1.09006 * 109.46647 * 179.97438 * 24 23 19 49 49 H 1.08005 * 120.02538 * 0.04389 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 2.6383 -0.0115 2.1912 6 6 3.1001 -0.6603 3.3217 7 6 2.8564 -2.0090 3.4934 8 6 2.1479 -2.7129 2.5302 9 8 1.9064 -4.0398 2.6972 10 6 2.4107 -4.6462 3.8888 11 6 2.0485 -6.1089 3.9002 12 8 1.4207 -6.5854 2.9784 13 7 2.4230 -6.8879 4.9343 14 6 2.0704 -8.3098 4.9455 15 6 2.6104 -8.9591 6.2214 16 1 2.2430 -8.4133 7.0904 17 6 2.1369 -10.4121 6.2941 18 6 2.6764 -11.0612 7.5702 19 6 4.2059 -11.0234 7.5542 20 1 4.5737 -11.5694 6.6854 21 6 4.7454 -11.6720 8.8306 22 8 6.1711 -11.7420 8.7633 23 6 4.6794 -9.5704 7.4814 24 6 4.1399 -8.9214 6.2053 25 6 1.6845 -2.0594 1.3978 26 1 -0.3933 0.4417 0.7650 27 1 1.7924 -0.5139 -0.8899 28 1 1.5614 2.4678 -1.2085 29 1 1.5878 2.4586 1.2242 30 1 2.8303 1.0430 2.0586 31 1 3.6519 -0.1120 4.0710 32 1 3.2135 -2.5143 4.3786 33 1 3.4951 -4.5397 3.9196 34 1 1.9727 -4.1570 4.7588 35 1 2.9254 -6.5070 5.6714 36 1 0.9859 -8.4155 4.9155 37 1 2.5075 -8.7995 4.0753 38 1 1.0472 -10.4389 6.3059 39 1 2.5043 -10.9579 5.4250 40 1 2.3086 -10.5152 8.4390 41 1 2.3386 -12.0962 7.6221 42 1 4.4513 -11.0750 9.6938 43 1 4.3364 -12.6777 8.9279 44 1 6.5823 -12.1435 9.5410 45 1 4.3116 -9.0245 8.3503 46 1 5.7691 -9.5436 7.4696 47 1 4.5077 -9.4673 5.3365 48 1 4.4770 -7.8861 6.1539 49 1 1.1325 -2.6051 0.6468 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14939082_4860298.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:02:55 Heat of formation + Delta-G solvation = -143.001071 kcal Electronic energy + Delta-G solvation = -28157.315197 eV Core-core repulsion = 24050.482153 eV Total energy + Delta-G solvation = -4106.833044 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.182 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -41.55133 -40.80043 -40.00523 -38.93845 -37.68940 -37.27806 -35.81458 -33.07458 -32.50270 -31.86126 -31.64746 -29.72445 -27.76190 -26.75882 -24.78967 -23.86083 -23.69946 -22.52725 -21.81449 -21.48218 -20.84165 -19.34341 -18.56420 -18.29024 -17.78771 -17.52053 -17.28147 -16.98500 -16.59822 -16.55852 -16.16994 -15.97992 -15.81591 -15.42210 -15.18538 -15.01397 -14.93386 -14.75527 -14.56982 -14.11215 -14.07585 -13.92710 -13.62514 -13.39493 -13.24776 -13.00982 -12.92379 -12.62888 -12.57082 -12.20014 -12.16469 -12.02879 -11.97801 -11.57077 -11.54718 -11.29749 -11.19725 -10.91947 -10.86397 -10.61849 -10.18830 -9.95806 -9.27818 -4.94741 0.18655 0.39352 1.25793 1.47151 1.50143 1.60484 1.97225 2.56127 2.64925 3.12665 3.39513 3.45388 3.49093 3.58911 3.62470 3.62744 3.75383 3.86653 3.87832 3.95149 4.00245 4.05606 4.16828 4.18211 4.30419 4.33809 4.35328 4.37617 4.43357 4.51359 4.53607 4.57355 4.64136 4.64934 4.73396 4.80785 4.94720 4.95647 5.00860 5.06869 5.10481 5.15463 5.22157 5.28118 5.33277 5.33968 5.41980 5.42788 5.63764 6.23078 6.37632 6.42217 6.61999 7.09357 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.527 6.527 2 C -0.078 4.078 3 Si 0.692 3.308 4 C -0.078 4.078 5 C -0.155 4.155 6 C -0.073 4.073 7 C -0.206 4.206 8 C 0.129 3.871 9 O -0.288 6.288 10 C 0.041 3.959 11 C 0.514 3.486 12 O -0.512 6.512 13 N -0.726 5.726 14 C 0.124 3.876 15 C -0.099 4.099 16 H 0.079 0.921 17 C -0.110 4.110 18 C -0.112 4.112 19 C -0.089 4.089 20 H 0.078 0.922 21 C 0.078 3.922 22 O -0.574 6.574 23 C -0.110 4.110 24 C -0.116 4.116 25 C -0.120 4.120 26 H 0.376 0.624 27 H 0.121 0.879 28 H -0.257 1.257 29 H -0.260 1.260 30 H 0.130 0.870 31 H 0.131 0.869 32 H 0.130 0.870 33 H 0.095 0.905 34 H 0.094 0.906 35 H 0.402 0.598 36 H 0.071 0.929 37 H 0.072 0.928 38 H 0.069 0.931 39 H 0.069 0.931 40 H 0.065 0.935 41 H 0.067 0.933 42 H 0.045 0.955 43 H 0.045 0.955 44 H 0.380 0.620 45 H 0.060 0.940 46 H 0.071 0.929 47 H 0.067 0.933 48 H 0.062 0.938 49 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.259 0.128 7.150 8.323 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.187 4.187 3 Si 0.593 3.407 4 C -0.078 4.078 5 C -0.173 4.173 6 C -0.091 4.091 7 C -0.224 4.224 8 C 0.084 3.916 9 O -0.200 6.200 10 C -0.038 4.038 11 C 0.299 3.701 12 O -0.386 6.386 13 N -0.381 5.381 14 C 0.001 3.999 15 C -0.118 4.118 16 H 0.097 0.903 17 C -0.148 4.148 18 C -0.150 4.150 19 C -0.108 4.108 20 H 0.097 0.903 21 C 0.000 4.000 22 O -0.379 6.379 23 C -0.147 4.147 24 C -0.154 4.154 25 C -0.139 4.139 26 H 0.224 0.776 27 H 0.138 0.862 28 H -0.182 1.182 29 H -0.185 1.185 30 H 0.147 0.853 31 H 0.149 0.851 32 H 0.148 0.852 33 H 0.113 0.887 34 H 0.112 0.888 35 H 0.236 0.764 36 H 0.089 0.911 37 H 0.090 0.910 38 H 0.088 0.912 39 H 0.087 0.913 40 H 0.084 0.916 41 H 0.086 0.914 42 H 0.063 0.937 43 H 0.063 0.937 44 H 0.227 0.773 45 H 0.079 0.921 46 H 0.090 0.910 47 H 0.085 0.915 48 H 0.080 0.920 49 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 3.441 0.444 5.189 6.242 hybrid contribution -0.591 -0.316 1.839 1.958 sum 2.850 0.128 7.028 7.585 Atomic orbital electron populations 1.86624 1.17485 1.79985 1.49247 1.25107 0.84133 1.11180 0.98306 0.94874 0.91614 0.74101 0.80096 1.20088 0.97791 0.93504 0.96436 1.20990 1.01292 1.00001 0.95028 1.20903 0.97603 0.93562 0.97018 1.21302 1.04728 0.96062 1.00349 1.19047 0.95329 0.82468 0.94794 1.86175 1.73813 1.20078 1.39973 1.22463 1.00693 0.91962 0.88691 1.20018 0.80013 0.87468 0.82640 1.90795 1.38073 1.74734 1.34982 1.45825 1.58636 1.10360 1.23289 1.21481 1.00618 0.79320 0.98452 1.21447 0.96252 0.96932 0.97191 0.90296 1.21472 1.00795 0.94195 0.98387 1.21501 0.94125 1.01182 0.98185 1.21180 0.94993 0.96783 0.97808 0.90332 1.22244 0.81052 0.99036 0.97631 1.86472 1.19777 1.85178 1.46508 1.21514 1.01257 0.94572 0.97400 1.21638 0.94145 1.00823 0.98758 1.20285 1.02787 0.93649 0.97173 0.77627 0.86166 1.18204 1.18530 0.85304 0.85107 0.85247 0.88719 0.88829 0.76364 0.91055 0.90997 0.91194 0.91262 0.91615 0.91411 0.93688 0.93655 0.77280 0.92128 0.91018 0.91460 0.91959 0.84626 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.09 12.83 -35.23 -0.45 -1.54 16 2 C -0.08 -0.03 2.80 36.01 0.10 0.07 16 3 Si 0.69 -0.53 29.88 -169.99 -5.08 -5.61 16 4 C -0.08 -0.07 5.35 -104.65 -0.56 -0.63 16 5 C -0.16 0.04 8.67 -39.56 -0.34 -0.31 16 6 C -0.07 0.05 10.04 -39.61 -0.40 -0.34 16 7 C -0.21 0.04 9.04 -39.43 -0.36 -0.32 16 8 C 0.13 0.28 6.69 -39.22 -0.26 0.02 16 9 O -0.29 -0.97 9.67 -39.33 -0.38 -1.35 16 10 C 0.04 -0.03 5.22 36.00 0.19 0.16 16 11 C 0.51 0.90 7.91 -10.99 -0.09 0.81 16 12 O -0.51 -3.58 16.50 -14.35 -0.24 -3.81 16 13 N -0.73 1.10 5.28 -60.29 -0.32 0.79 16 14 C 0.12 -0.12 5.07 -4.04 -0.02 -0.14 16 15 C -0.10 0.27 2.22 -90.62 -0.20 0.07 16 16 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 17 C -0.11 0.26 5.20 -26.73 -0.14 0.12 16 18 C -0.11 0.26 5.20 -26.73 -0.14 0.12 16 19 C -0.09 0.11 2.43 -90.62 -0.22 -0.11 16 20 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 21 C 0.08 -0.10 6.43 37.16 0.24 0.14 16 22 O -0.57 -0.04 13.19 -35.23 -0.46 -0.51 16 23 C -0.11 0.16 5.10 -26.74 -0.14 0.03 16 24 C -0.12 0.27 5.08 -26.73 -0.14 0.13 16 25 C -0.12 -0.30 9.62 -39.43 -0.38 -0.68 16 26 H 0.38 -0.33 8.70 45.56 0.40 0.07 16 27 H 0.12 -0.02 7.96 -51.93 -0.41 -0.43 16 28 H -0.26 -0.66 7.11 56.52 0.40 -0.25 16 29 H -0.26 -0.25 7.01 56.52 0.40 0.15 16 30 H 0.13 -0.25 4.84 -52.49 -0.25 -0.50 16 31 H 0.13 -0.40 8.06 -52.49 -0.42 -0.82 16 32 H 0.13 -0.37 6.30 -52.49 -0.33 -0.70 16 33 H 0.09 -0.31 7.66 -51.93 -0.40 -0.70 16 34 H 0.09 -0.30 7.66 -51.93 -0.40 -0.69 16 35 H 0.40 -1.83 7.65 -40.82 -0.31 -2.14 16 36 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 37 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 38 H 0.07 -0.17 8.14 -51.92 -0.42 -0.60 16 39 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 40 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 41 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 42 H 0.04 -0.09 8.14 -51.93 -0.42 -0.51 16 43 H 0.05 -0.08 8.14 -51.93 -0.42 -0.51 16 44 H 0.38 -1.48 9.12 45.56 0.42 -1.07 16 45 H 0.06 -0.11 8.14 -51.93 -0.42 -0.53 16 46 H 0.07 0.00 7.82 -51.92 -0.41 -0.40 16 47 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 48 H 0.06 -0.20 7.18 -51.93 -0.37 -0.57 16 49 H 0.14 0.43 8.06 -52.48 -0.42 0.01 16 LS Contribution 392.25 15.07 5.91 5.91 Total: 0.00 -10.30 392.25 -11.07 -21.36 By element: Atomic # 1 Polarization: -7.17 SS G_CDS: -7.20 Total: -14.37 kcal Atomic # 6 Polarization: 1.99 SS G_CDS: -2.85 Total: -0.86 kcal Atomic # 7 Polarization: 1.10 SS G_CDS: -0.32 Total: 0.79 kcal Atomic # 8 Polarization: -5.68 SS G_CDS: -1.53 Total: -7.22 kcal Atomic # 14 Polarization: -0.53 SS G_CDS: -5.08 Total: -5.61 kcal Total LS contribution 5.91 Total: 5.91 kcal Total: -10.30 -11.07 -21.36 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_4860298.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -121.638 kcal (2) G-P(sol) polarization free energy of solvation -10.297 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -131.935 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.066 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.363 kcal (6) G-S(sol) free energy of system = (1) + (5) -143.001 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds