Wall clock time and date at job start Sun Mar 7 2021 02:03:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46508 * 1 3 3 C 1.37640 * 125.67560 * 2 1 4 4 C 1.46670 * 126.22624 * 0.02562 * 3 2 1 5 5 O 1.21695 * 120.00021 * 355.07168 * 4 3 2 6 6 N 1.34774 * 120.00330 * 175.08173 * 4 3 2 7 7 C 1.46495 * 120.00405 * 184.75626 * 6 4 3 8 8 C 1.52999 * 109.47302 * 179.97438 * 7 6 4 9 9 H 1.08999 * 109.47080 * 305.00013 * 8 7 6 10 10 C 1.53003 * 109.46892 * 65.00102 * 8 7 6 11 11 C 1.52999 * 109.46892 * 179.97438 * 10 8 7 12 12 C 1.53003 * 109.47167 * 299.99417 * 11 10 8 13 13 H 1.08994 * 109.47102 * 300.00047 * 12 11 10 14 14 C 1.52999 * 109.46793 * 179.97438 * 12 11 10 15 15 O 1.42895 * 109.47105 * 65.00449 * 14 12 11 16 16 C 1.53003 * 109.46739 * 60.00489 * 12 11 10 17 17 C 1.52999 * 109.46892 * 299.99680 * 16 12 11 18 18 C 1.37883 * 107.54958 * 179.97438 * 3 2 1 19 19 C 1.39884 * 107.08895 * 359.76963 * 18 3 2 20 20 Br 1.89099 * 126.07086 * 180.23977 * 19 18 3 21 21 C 1.35501 * 107.85522 * 0.37793 * 19 18 3 22 22 C 1.50694 * 125.57055 * 179.87867 * 21 19 18 23 23 O 1.42900 * 109.47061 * 119.10053 * 22 21 19 24 24 Si 1.86305 * 109.47138 * 239.09584 * 22 21 19 25 25 H 1.09000 * 109.46794 * 276.07531 * 1 2 3 26 26 H 1.09000 * 109.47256 * 36.07524 * 1 2 3 27 27 H 1.09003 * 109.46872 * 156.07675 * 1 2 3 28 28 H 0.97003 * 119.99461 * 4.74794 * 6 4 3 29 29 H 1.09005 * 109.46819 * 299.99659 * 7 6 4 30 30 H 1.09000 * 109.47095 * 59.99266 * 7 6 4 31 31 H 1.08994 * 109.46804 * 299.99584 * 10 8 7 32 32 H 1.08999 * 109.47331 * 60.00065 * 10 8 7 33 33 H 1.09002 * 109.47011 * 179.97438 * 11 10 8 34 34 H 1.09005 * 109.47465 * 59.99766 * 11 10 8 35 35 H 1.09007 * 109.46947 * 185.00533 * 14 12 11 36 36 H 1.08999 * 109.47489 * 305.00214 * 14 12 11 37 37 H 0.96704 * 113.99901 * 179.97438 * 15 14 12 38 38 H 1.08998 * 109.46782 * 179.97438 * 16 12 11 39 39 H 1.08999 * 109.47331 * 59.99615 * 16 12 11 40 40 H 1.08999 * 109.47080 * 300.00089 * 17 16 12 41 41 H 1.09002 * 109.47011 * 180.02562 * 17 16 12 42 42 H 1.08001 * 126.45692 * 179.97438 * 18 3 2 43 43 H 1.08996 * 109.47262 * 359.09963 * 22 21 19 44 44 H 0.96704 * 114.00426 * 59.99926 * 23 22 21 45 45 H 1.48495 * 109.99654 * 56.13830 * 24 22 21 46 46 H 1.48506 * 109.99977 * 177.45313 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2678 1.1181 0.0000 4 6 1.8122 2.5122 0.0005 5 8 0.6250 2.7644 -0.0895 6 7 2.7082 3.5140 0.1005 7 6 2.2478 4.9008 0.2061 8 6 3.4566 5.8332 0.3070 9 1 4.0882 5.5205 1.1385 10 6 4.2588 5.7709 -0.9944 11 6 5.4673 6.7038 -0.8936 12 6 4.9868 8.1374 -0.6589 13 1 4.3551 8.4496 -1.4904 14 6 6.1953 9.0701 -0.5575 15 8 6.8794 9.1013 -1.8117 16 6 4.1846 8.1996 0.6425 17 6 2.9761 7.2667 0.5418 18 6 3.5782 0.6891 0.0006 19 6 3.5529 -0.7095 0.0063 20 35 5.0609 -1.8503 0.0160 21 6 2.2558 -1.1016 0.0006 22 6 1.7714 -2.5285 0.0012 23 8 0.9918 -2.7664 1.1750 24 14 0.7252 -2.8298 -1.5106 25 1 -0.3633 0.1088 1.0219 26 1 -0.3634 0.8306 -0.6051 27 1 -0.3633 -0.9394 -0.4167 28 1 3.6579 3.3168 0.1027 29 1 1.6631 5.1577 -0.6773 30 1 1.6287 5.0113 1.0963 31 1 4.6007 4.7496 -1.1618 32 1 3.6272 6.0836 -1.8258 33 1 6.0390 6.6591 -1.8206 34 1 6.0991 6.3916 -0.0620 35 1 5.8584 10.0749 -0.3022 36 1 6.8714 8.7061 0.2161 37 1 7.6581 9.6746 -1.8208 38 1 3.8427 9.2209 0.8100 39 1 4.8163 7.8873 1.4740 40 1 2.3444 7.5790 -0.2898 41 1 2.4044 7.3114 1.4687 42 1 4.4584 1.3150 0.0004 43 1 2.6276 -3.2029 -0.0091 44 1 0.2116 -2.2001 1.2504 45 1 1.4953 -2.4964 -2.7357 46 1 0.2920 -4.2496 -1.5537 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14939082_5000100.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:03:05 Heat of formation + Delta-G solvation = -83.851801 kcal Electronic energy + Delta-G solvation = -27952.365237 eV Core-core repulsion = 23889.761516 eV Total energy + Delta-G solvation = -4062.603721 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 387.088 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -42.90423 -40.71270 -39.77582 -37.92329 -37.60398 -35.93322 -34.48090 -33.10650 -31.98101 -31.67862 -30.98164 -28.49777 -27.36754 -26.69957 -24.65833 -23.75782 -22.95654 -21.71724 -21.58260 -20.85538 -20.46351 -19.00253 -18.20461 -18.11686 -17.29859 -17.13273 -16.69802 -16.47229 -16.03601 -15.99232 -15.76748 -15.35550 -15.07913 -14.87166 -14.65487 -14.57161 -14.42698 -14.33482 -14.23914 -13.92337 -13.72558 -13.43979 -13.21128 -13.07296 -12.94922 -12.80201 -12.49356 -12.37691 -12.02177 -11.95011 -11.88592 -11.40845 -11.37793 -11.18718 -11.05178 -11.02758 -10.86060 -10.76679 -10.21543 -9.82033 -9.29739 -5.24072 0.13073 0.59454 0.89117 1.17286 1.42801 1.53926 1.81292 2.16358 2.28257 3.16795 3.32111 3.39426 3.53304 3.64160 3.72767 3.76355 3.79158 3.87997 4.11075 4.19893 4.25453 4.31336 4.32323 4.39899 4.47076 4.51408 4.53164 4.60972 4.61305 4.67301 4.70332 4.71736 4.79167 4.84249 4.97683 5.11086 5.18002 5.20845 5.24604 5.26614 5.31547 5.38816 5.47737 5.54458 5.58491 5.81694 6.39051 6.42726 6.88842 7.04292 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.050 3.950 2 N -0.394 5.394 3 C -0.043 4.043 4 C 0.591 3.409 5 O -0.571 6.571 6 N -0.704 5.704 7 C 0.129 3.871 8 C -0.088 4.088 9 H 0.090 0.910 10 C -0.113 4.113 11 C -0.107 4.107 12 C -0.090 4.090 13 H 0.061 0.939 14 C 0.075 3.925 15 O -0.597 6.597 16 C -0.108 4.108 17 C -0.110 4.110 18 C -0.108 4.108 19 C -0.183 4.183 20 Br -0.028 7.028 21 C 0.048 3.952 22 C -0.054 4.054 23 O -0.540 6.540 24 Si 0.756 3.244 25 H 0.108 0.892 26 H 0.108 0.892 27 H 0.111 0.889 28 H 0.414 0.586 29 H 0.062 0.938 30 H 0.069 0.931 31 H 0.069 0.931 32 H 0.055 0.945 33 H 0.053 0.947 34 H 0.067 0.933 35 H 0.051 0.949 36 H 0.054 0.946 37 H 0.395 0.605 38 H 0.070 0.930 39 H 0.073 0.927 40 H 0.063 0.937 41 H 0.076 0.924 42 H 0.175 0.825 43 H 0.127 0.873 44 H 0.390 0.610 45 H -0.285 1.285 46 H -0.266 1.266 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.698 4.188 1.910 4.656 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 N -0.068 5.068 3 C -0.157 4.157 4 C 0.378 3.622 5 O -0.452 6.452 6 N -0.356 5.356 7 C 0.006 3.994 8 C -0.107 4.107 9 H 0.108 0.892 10 C -0.151 4.151 11 C -0.144 4.144 12 C -0.108 4.108 13 H 0.080 0.920 14 C -0.003 4.003 15 O -0.405 6.405 16 C -0.145 4.145 17 C -0.148 4.148 18 C -0.134 4.134 19 C -0.269 4.269 20 Br 0.056 6.944 21 C -0.073 4.073 22 C -0.164 4.164 23 O -0.347 6.347 24 Si 0.657 3.343 25 H 0.126 0.874 26 H 0.126 0.874 27 H 0.129 0.871 28 H 0.251 0.749 29 H 0.080 0.920 30 H 0.087 0.913 31 H 0.087 0.913 32 H 0.074 0.926 33 H 0.071 0.929 34 H 0.086 0.914 35 H 0.069 0.931 36 H 0.072 0.928 37 H 0.244 0.756 38 H 0.089 0.911 39 H 0.091 0.909 40 H 0.081 0.919 41 H 0.095 0.905 42 H 0.192 0.808 43 H 0.144 0.856 44 H 0.239 0.761 45 H -0.211 1.211 46 H -0.192 1.192 Dipole moment (debyes) X Y Z Total from point charges -1.499 2.727 1.089 3.297 hybrid contribution 1.424 0.538 0.225 1.539 sum -0.075 3.265 1.315 3.520 Atomic orbital electron populations 1.22773 0.73676 1.05788 1.06565 1.43887 1.07941 1.03479 1.51447 1.20049 0.89982 0.87828 1.17875 1.16890 0.85501 0.83552 0.76229 1.90806 1.17242 1.85094 1.52029 1.45596 1.10210 1.06125 1.73639 1.21470 0.97039 0.78786 1.02074 1.21355 0.95424 0.94955 0.98982 0.89184 1.21601 0.96655 0.99808 0.97019 1.21463 0.97355 0.93849 1.01754 1.21183 0.95604 0.95267 0.98769 0.92001 1.22334 0.93845 0.98847 0.85252 1.86435 1.46803 1.72049 1.35208 1.21468 0.96559 1.00154 0.96355 1.21469 0.97610 0.93026 1.02662 1.21483 0.95874 0.92762 1.03326 1.20977 0.91430 0.94977 1.19487 1.96654 1.36161 1.63321 1.98258 1.20838 0.89867 0.90291 1.06330 1.25003 1.01181 0.90173 1.00050 1.86594 1.42010 1.63921 1.42203 0.94408 0.84676 0.82630 0.72596 0.87388 0.87356 0.87104 0.74875 0.91962 0.91293 0.91255 0.92577 0.92852 0.91400 0.93074 0.92798 0.75606 0.91138 0.90857 0.91871 0.90514 0.80760 0.85621 0.76053 1.21094 1.19194 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.29 8.81 127.77 1.13 0.83 16 2 N -0.39 -0.20 3.11 -519.60 -1.62 -1.82 16 3 C -0.04 -0.09 6.88 40.35 0.28 0.19 16 4 C 0.59 1.72 7.77 86.45 0.67 2.39 16 5 O -0.57 -4.69 14.79 -4.33 -0.06 -4.75 16 6 N -0.70 1.68 5.27 -467.10 -2.46 -0.78 16 7 C 0.13 -0.37 5.07 86.38 0.44 0.07 16 8 C -0.09 0.52 2.23 -10.79 -0.02 0.49 16 9 H 0.09 -0.65 8.14 -2.39 -0.02 -0.67 16 10 C -0.11 0.45 5.08 30.59 0.16 0.61 16 11 C -0.11 0.23 5.10 30.59 0.16 0.39 16 12 C -0.09 0.19 2.43 -10.79 -0.03 0.16 16 13 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 14 C 0.07 -0.17 6.42 71.98 0.46 0.30 16 15 O -0.60 -0.59 13.20 -148.98 -1.97 -2.56 16 16 C -0.11 0.57 5.20 30.59 0.16 0.73 16 17 C -0.11 0.60 5.20 30.59 0.16 0.76 16 18 C -0.11 -0.13 10.34 22.58 0.23 0.10 16 19 C -0.18 -0.76 6.53 22.04 0.14 -0.62 16 20 Br -0.03 -0.13 33.05 -20.37 -0.67 -0.80 16 21 C 0.05 0.12 5.22 41.34 0.22 0.33 16 22 C -0.05 -0.05 2.88 71.23 0.20 0.16 16 23 O -0.54 -0.01 12.88 -148.98 -1.92 -1.92 16 24 Si 0.76 -1.10 29.68 68.60 2.04 0.93 16 25 H 0.11 -0.92 8.14 -2.39 -0.02 -0.94 16 26 H 0.11 -0.34 6.57 -2.39 -0.02 -0.36 16 27 H 0.11 -1.29 3.99 -2.39 -0.01 -1.30 16 28 H 0.41 -2.75 6.55 -92.71 -0.61 -3.36 16 29 H 0.06 -0.01 8.14 -2.38 -0.02 -0.03 16 30 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 31 H 0.07 -0.36 7.18 -2.39 -0.02 -0.38 16 32 H 0.06 -0.08 8.14 -2.39 -0.02 -0.10 16 33 H 0.05 0.09 7.82 -2.39 -0.02 0.08 16 34 H 0.07 -0.23 8.14 -2.38 -0.02 -0.25 16 35 H 0.05 -0.19 8.14 -2.38 -0.02 -0.21 16 36 H 0.05 -0.22 8.14 -2.39 -0.02 -0.24 16 37 H 0.39 -2.80 9.12 -74.05 -0.68 -3.47 16 38 H 0.07 -0.39 8.14 -2.39 -0.02 -0.41 16 39 H 0.07 -0.46 8.14 -2.39 -0.02 -0.48 16 40 H 0.06 -0.26 8.14 -2.39 -0.02 -0.27 16 41 H 0.08 -0.50 8.14 -2.39 -0.02 -0.52 16 42 H 0.18 -0.72 7.45 -2.91 -0.02 -0.74 16 43 H 0.13 0.37 6.94 -2.39 -0.02 0.35 16 44 H 0.39 -3.21 6.98 -74.05 -0.52 -3.73 16 45 H -0.28 -1.52 7.11 99.48 0.71 -0.81 16 46 H -0.27 -0.91 7.11 99.48 0.71 -0.20 16 Total: 0.00 -19.92 379.79 -3.05 -22.96 By element: Atomic # 1 Polarization: -17.42 SS G_CDS: -0.74 Total: -18.15 kcal Atomic # 6 Polarization: 2.54 SS G_CDS: 4.35 Total: 6.89 kcal Atomic # 7 Polarization: 1.48 SS G_CDS: -4.08 Total: -2.60 kcal Atomic # 8 Polarization: -5.29 SS G_CDS: -3.95 Total: -9.23 kcal Atomic # 14 Polarization: -1.10 SS G_CDS: 2.04 Total: 0.93 kcal Atomic # 35 Polarization: -0.13 SS G_CDS: -0.67 Total: -0.80 kcal Total: -19.92 -3.05 -22.96 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_5000100.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.889 kcal (2) G-P(sol) polarization free energy of solvation -19.916 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.805 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.047 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.963 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.852 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds