Wall clock time and date at job start Sun Mar 7 2021 02:03:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35965 * 117.00220 * 2 1 4 4 C 1.39446 * 120.12109 * 180.02562 * 3 2 1 5 5 O 1.34776 * 133.24203 * 0.03803 * 4 3 2 6 6 C 1.34931 * 110.84041 * 179.97438 * 5 4 3 7 7 C 1.46995 * 125.14111 * 179.97438 * 6 5 4 8 8 O 1.21649 * 120.00330 * 180.02562 * 7 6 5 9 9 N 1.34777 * 119.99780 * 0.02562 * 7 6 5 10 10 C 1.46503 * 120.00000 * 179.97438 * 9 7 6 11 11 C 1.53002 * 109.46922 * 180.02562 * 10 9 7 12 12 H 1.09002 * 109.47070 * 55.00389 * 11 10 9 13 13 C 1.52997 * 109.46817 * 175.00209 * 11 10 9 14 14 C 1.52999 * 109.47317 * 179.97438 * 13 11 10 15 15 C 1.53005 * 109.47159 * 300.00546 * 14 13 11 16 16 H 1.09002 * 109.46935 * 299.99411 * 15 14 13 17 17 C 1.53002 * 109.46982 * 179.97438 * 15 14 13 18 18 O 1.42899 * 109.47262 * 174.99741 * 17 15 14 19 19 C 1.52997 * 109.47452 * 59.99536 * 15 14 13 20 20 C 1.53000 * 109.47233 * 295.00015 * 11 10 9 21 21 C 1.35806 * 109.72132 * 0.22971 * 6 5 4 22 22 C 1.40611 * 119.13807 * 180.02562 * 4 3 2 23 23 C 1.39775 * 120.11896 * 0.02562 * 22 4 3 24 24 C 1.50699 * 120.09492 * 179.97438 * 23 22 4 25 25 O 1.42903 * 109.46951 * 285.02534 * 24 23 22 26 26 Si 1.86302 * 109.47271 * 165.02715 * 24 23 22 27 27 C 1.36629 * 119.81299 * 359.97438 * 23 22 4 28 28 C 1.38258 * 120.11911 * 0.02562 * 3 2 1 29 29 H 1.09008 * 109.46596 * 60.00067 * 1 2 3 30 30 H 1.08992 * 109.47112 * 179.97438 * 1 2 3 31 31 H 1.08997 * 109.46847 * 300.00579 * 1 2 3 32 32 H 0.96999 * 120.00330 * 0.02562 * 9 7 6 33 33 H 1.09000 * 109.46911 * 60.00372 * 10 9 7 34 34 H 1.08996 * 109.47513 * 300.00100 * 10 9 7 35 35 H 1.08996 * 109.47853 * 300.00202 * 13 11 10 36 36 H 1.09002 * 109.47153 * 60.00231 * 13 11 10 37 37 H 1.09002 * 109.46716 * 60.00091 * 14 13 11 38 38 H 1.09000 * 109.47486 * 180.02562 * 14 13 11 39 39 H 1.08997 * 109.47011 * 294.99798 * 17 15 14 40 40 H 1.08999 * 109.47369 * 54.99905 * 17 15 14 41 41 H 0.96697 * 114.00727 * 179.97438 * 18 17 15 42 42 H 1.09002 * 109.46695 * 59.99734 * 19 15 14 43 43 H 1.08993 * 109.47194 * 179.97438 * 19 15 14 44 44 H 1.08992 * 109.47399 * 300.00166 * 20 11 10 45 45 H 1.09004 * 109.46724 * 60.00652 * 20 11 10 46 46 H 1.07999 * 126.95926 * 179.72763 * 21 6 5 47 47 H 1.08997 * 109.47099 * 45.02257 * 24 23 22 48 48 H 0.96704 * 113.99895 * 180.02562 * 25 24 23 49 49 H 1.48498 * 110.00008 * 59.99677 * 26 24 23 50 50 H 1.48492 * 110.00076 * 181.31839 * 26 24 23 51 51 H 1.08001 * 119.75617 * 179.97438 * 27 23 22 52 52 H 1.07993 * 119.66543 * 359.97438 * 28 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4387 1.2873 -0.0005 5 8 4.4141 0.3572 -0.0018 6 6 5.6318 0.9385 -0.0024 7 6 6.9132 0.2183 -0.0032 8 8 7.9596 0.8386 -0.0032 9 7 6.9287 -1.1294 -0.0039 10 6 8.2058 -1.8473 -0.0053 11 6 7.9435 -3.3546 -0.0065 12 1 7.3000 -3.6108 -0.8482 13 6 9.2717 -4.1032 -0.1336 14 6 9.0096 -5.6106 -0.1342 15 6 8.3225 -6.0093 1.1735 16 1 8.9661 -5.7528 2.0150 17 6 8.0598 -7.5166 1.1725 18 8 7.5251 -7.9077 2.4387 19 6 6.9942 -5.2607 1.3005 20 6 7.2562 -3.7538 1.3009 21 6 5.4945 2.2896 0.0036 22 6 4.0555 2.5509 0.0000 23 6 3.2767 3.7116 0.0016 24 6 3.9384 5.0655 0.0028 25 8 4.4619 5.3387 1.3041 26 14 2.6863 6.3690 -0.4490 27 6 1.9138 3.6151 0.0022 28 6 1.2958 2.3726 0.0005 29 1 -0.3633 0.5139 -0.8901 30 1 -0.3633 -1.0276 -0.0005 31 1 -0.3633 0.5139 0.8899 32 1 6.0943 -1.6241 -0.0042 33 1 8.7749 -1.5779 0.8845 34 1 8.7736 -1.5769 -0.8955 35 1 9.7615 -3.8189 -1.0649 36 1 9.9152 -3.8471 0.7082 37 1 8.3660 -5.8671 -0.9757 38 1 9.9559 -6.1440 -0.2243 39 1 7.3460 -7.7605 0.3857 40 1 8.9943 -8.0482 0.9930 41 1 7.3335 -8.8529 2.5098 42 1 6.3507 -5.5172 0.4590 43 1 6.5045 -5.5451 2.2318 44 1 7.8995 -3.4977 2.1425 45 1 6.3098 -3.2204 1.3913 46 1 6.2875 3.0228 0.0088 47 1 4.7502 5.0739 -0.7245 48 1 4.9026 6.1962 1.3787 49 1 1.5742 6.3678 0.5351 50 1 3.3335 7.7051 -0.4824 51 1 1.3130 4.5125 0.0038 52 1 0.2175 2.3120 0.0005 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14939082_6672420.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:03:26 Heat of formation + Delta-G solvation = -132.152151 kcal Electronic energy + Delta-G solvation = -34408.632396 eV Core-core repulsion = 29727.135323 eV Total energy + Delta-G solvation = -4681.497073 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.181 amu Computer time = 1.63 seconds Orbital eigenvalues (eV) -43.59841 -40.99398 -40.50427 -39.83481 -38.96324 -37.65933 -37.15925 -35.85408 -33.51542 -32.96401 -31.92189 -31.78461 -30.96388 -28.88064 -28.09303 -26.27340 -25.40878 -24.16018 -23.89419 -23.58670 -21.78368 -21.74230 -21.50668 -20.83003 -19.64926 -18.79269 -18.54473 -18.41990 -18.24237 -17.59640 -17.08682 -16.94578 -16.71948 -16.47031 -16.28710 -16.06244 -15.86650 -15.62458 -15.47762 -15.15808 -14.87662 -14.75538 -14.53770 -14.42430 -14.08571 -14.00252 -13.97792 -13.85028 -13.50095 -13.36543 -13.20460 -13.17530 -12.89564 -12.64589 -12.57424 -12.41335 -12.13036 -12.05504 -11.97152 -11.70802 -11.48312 -11.42692 -11.14733 -11.13367 -10.88515 -10.84253 -10.48706 -10.20035 -9.69713 -8.92722 -5.00331 -0.52369 0.18946 0.77725 1.21936 1.35702 1.54819 1.89438 2.01594 2.11624 2.13183 2.43091 3.18128 3.23524 3.40055 3.54241 3.60887 3.65614 3.69356 3.69945 3.89489 4.00209 4.01170 4.03310 4.11763 4.13617 4.15096 4.20648 4.22577 4.36098 4.36908 4.40756 4.43440 4.49484 4.51088 4.52222 4.57901 4.62683 4.70218 4.76378 4.86483 4.89675 4.94831 5.00218 5.08160 5.12359 5.13595 5.16628 5.21646 5.28590 5.32069 5.38467 5.40687 5.48799 5.68688 6.20948 6.38892 6.44027 6.67156 6.99387 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.310 6.310 3 C 0.150 3.850 4 C 0.046 3.954 5 O -0.174 6.174 6 C -0.023 4.023 7 C 0.601 3.399 8 O -0.511 6.511 9 N -0.715 5.715 10 C 0.121 3.879 11 C -0.100 4.100 12 H 0.080 0.920 13 C -0.110 4.110 14 C -0.112 4.112 15 C -0.089 4.089 16 H 0.078 0.922 17 C 0.078 3.922 18 O -0.574 6.574 19 C -0.110 4.110 20 C -0.117 4.117 21 C -0.105 4.105 22 C -0.082 4.082 23 C -0.051 4.051 24 C -0.075 4.075 25 O -0.533 6.533 26 Si 0.688 3.312 27 C -0.090 4.090 28 C -0.177 4.177 29 H 0.061 0.939 30 H 0.105 0.895 31 H 0.060 0.940 32 H 0.408 0.592 33 H 0.075 0.925 34 H 0.075 0.925 35 H 0.070 0.930 36 H 0.069 0.931 37 H 0.065 0.935 38 H 0.067 0.933 39 H 0.045 0.955 40 H 0.045 0.955 41 H 0.380 0.620 42 H 0.060 0.940 43 H 0.071 0.929 44 H 0.067 0.933 45 H 0.063 0.937 46 H 0.172 0.828 47 H 0.077 0.923 48 H 0.380 0.620 49 H -0.253 1.253 50 H -0.259 1.259 51 H 0.140 0.860 52 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.789 -2.261 -3.871 5.870 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.224 6.224 3 C 0.104 3.896 4 C -0.002 4.002 5 O -0.075 6.075 6 C -0.073 4.073 7 C 0.386 3.614 8 O -0.388 6.388 9 N -0.367 5.367 10 C -0.002 4.002 11 C -0.119 4.119 12 H 0.098 0.902 13 C -0.148 4.148 14 C -0.150 4.150 15 C -0.107 4.107 16 H 0.096 0.904 17 C 0.001 3.999 18 O -0.379 6.379 19 C -0.147 4.147 20 C -0.155 4.155 21 C -0.125 4.125 22 C -0.083 4.083 23 C -0.051 4.051 24 C -0.184 4.184 25 O -0.340 6.340 26 Si 0.589 3.411 27 C -0.108 4.108 28 C -0.196 4.196 29 H 0.080 0.920 30 H 0.123 0.877 31 H 0.079 0.921 32 H 0.244 0.756 33 H 0.093 0.907 34 H 0.093 0.907 35 H 0.088 0.912 36 H 0.087 0.913 37 H 0.084 0.916 38 H 0.086 0.914 39 H 0.063 0.937 40 H 0.063 0.937 41 H 0.227 0.773 42 H 0.079 0.921 43 H 0.090 0.910 44 H 0.085 0.915 45 H 0.082 0.918 46 H 0.190 0.810 47 H 0.095 0.905 48 H 0.228 0.772 49 H -0.178 1.178 50 H -0.184 1.184 51 H 0.157 0.843 52 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -3.570 -1.556 -3.386 5.161 hybrid contribution 0.160 -0.313 0.678 0.763 sum -3.411 -1.869 -2.709 4.739 Atomic orbital electron populations 1.23188 0.77355 1.04715 1.01809 1.86169 1.22128 1.25672 1.88405 1.17724 0.86477 0.85863 0.99492 1.18734 0.87443 0.86873 1.07169 1.84049 1.12641 1.34693 1.76141 1.21971 0.83920 0.92592 1.08861 1.16605 0.85394 0.82143 0.77238 1.90916 1.30343 1.67515 1.50032 1.45926 1.10808 1.05678 1.74253 1.21563 0.84732 0.90769 1.03101 1.21453 0.98314 0.92901 0.99235 0.90183 1.21465 0.96077 0.94490 1.02720 1.21501 1.00650 0.95892 0.96944 1.21180 0.97770 0.93108 0.98673 0.90355 1.22244 0.97013 0.95445 0.85246 1.86475 1.86328 1.29970 1.35139 1.21501 0.96570 0.94094 1.02564 1.21636 1.00570 0.96277 0.97014 1.22689 0.94673 0.94319 1.00851 1.19400 0.92654 0.92102 1.04165 1.18335 0.92359 0.92007 1.02404 1.24783 1.04873 1.00600 0.88163 1.86625 1.76765 1.41084 1.29545 0.94984 0.79631 0.76929 0.89541 1.20525 0.93354 0.97794 0.99152 1.20950 1.00369 0.90437 1.07848 0.92023 0.87672 0.92147 0.75600 0.90713 0.90709 0.91162 0.91267 0.91589 0.91428 0.93682 0.93681 0.77322 0.92098 0.91022 0.91465 0.91845 0.81012 0.90510 0.77200 1.17763 1.18409 0.84263 0.83409 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.31 -0.60 10.50 -19.63 -0.21 -0.81 16 3 C 0.15 0.37 6.70 -39.12 -0.26 0.10 16 4 C 0.05 0.18 7.35 -38.24 -0.28 -0.10 16 5 O -0.17 -0.69 10.28 2.65 0.03 -0.66 16 6 C -0.02 -0.09 7.07 -36.91 -0.26 -0.35 16 7 C 0.60 2.25 7.80 -12.71 -0.10 2.15 16 8 O -0.51 -3.33 16.83 5.23 0.09 -3.24 16 9 N -0.72 -0.72 5.28 -61.52 -0.32 -1.05 16 10 C 0.12 0.00 5.06 -4.04 -0.02 -0.02 16 11 C -0.10 0.15 2.23 -90.62 -0.20 -0.05 16 12 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 13 C -0.11 0.19 5.20 -26.73 -0.14 0.05 16 14 C -0.11 0.19 5.20 -26.73 -0.14 0.05 16 15 C -0.09 0.04 2.43 -90.62 -0.22 -0.18 16 16 H 0.08 0.06 8.14 -51.93 -0.42 -0.37 16 17 C 0.08 -0.04 6.43 37.16 0.24 0.19 16 18 O -0.57 -0.45 13.19 -35.23 -0.46 -0.92 16 19 C -0.11 0.02 5.10 -26.76 -0.14 -0.11 16 20 C -0.12 0.09 5.07 -26.76 -0.14 -0.05 16 21 C -0.10 -0.38 10.68 -37.23 -0.40 -0.77 16 22 C -0.08 -0.29 6.16 -105.21 -0.65 -0.94 16 23 C -0.05 -0.11 5.30 -104.63 -0.55 -0.66 16 24 C -0.07 -0.03 2.70 36.01 0.10 0.06 16 25 O -0.53 -0.94 12.86 -35.23 -0.45 -1.39 16 26 Si 0.69 -0.77 30.20 -169.99 -5.13 -5.91 16 27 C -0.09 -0.06 8.62 -39.96 -0.34 -0.40 16 28 C -0.18 -0.06 9.03 -39.37 -0.36 -0.41 16 29 H 0.06 -0.22 7.66 -51.92 -0.40 -0.62 16 30 H 0.10 -0.38 8.14 -51.93 -0.42 -0.81 16 31 H 0.06 -0.19 7.66 -51.93 -0.40 -0.59 16 32 H 0.41 -0.14 7.37 -40.82 -0.30 -0.44 16 33 H 0.07 0.06 8.14 -51.93 -0.42 -0.37 16 34 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 35 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 36 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 37 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 38 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 39 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 40 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 41 H 0.38 -1.24 9.12 45.56 0.42 -0.82 16 42 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 43 H 0.07 0.09 7.82 -51.93 -0.41 -0.31 16 44 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 45 H 0.06 -0.04 7.18 -51.93 -0.37 -0.42 16 46 H 0.17 0.44 8.06 -52.49 -0.42 0.01 16 47 H 0.08 -0.07 7.96 -51.93 -0.41 -0.48 16 48 H 0.38 -0.88 8.74 45.56 0.40 -0.48 16 49 H -0.25 -0.33 6.75 56.52 0.38 0.05 16 50 H -0.26 -0.24 7.11 56.52 0.40 0.16 16 51 H 0.14 -0.17 4.85 -52.49 -0.25 -0.43 16 52 H 0.15 -0.39 6.26 -52.49 -0.33 -0.72 16 LS Contribution 419.45 15.07 6.32 6.32 Total: 0.00 -9.56 419.45 -10.21 -19.77 By element: Atomic # 1 Polarization: -4.41 SS G_CDS: -7.19 Total: -11.60 kcal Atomic # 6 Polarization: 2.37 SS G_CDS: -2.87 Total: -0.50 kcal Atomic # 7 Polarization: -0.72 SS G_CDS: -0.32 Total: -1.05 kcal Atomic # 8 Polarization: -6.02 SS G_CDS: -1.01 Total: -7.03 kcal Atomic # 14 Polarization: -0.77 SS G_CDS: -5.13 Total: -5.91 kcal Total LS contribution 6.32 Total: 6.32 kcal Total: -9.56 -10.21 -19.77 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_6672420.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -112.384 kcal (2) G-P(sol) polarization free energy of solvation -9.559 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.943 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.209 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.768 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.152 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.63 seconds