Wall clock time and date at job start Sun Mar 7 2021 02:03:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86305 * 109.47174 * 2 1 4 4 C 1.50702 * 109.46951 * 239.99882 * 2 1 3 5 5 C 1.34234 * 126.49984 * 105.02446 * 4 2 1 6 6 N 1.36833 * 109.93968 * 179.97438 * 5 4 2 7 7 C 1.46499 * 125.06343 * 180.02562 * 6 5 4 8 8 C 1.50699 * 109.47361 * 265.02803 * 7 6 5 9 9 O 1.21286 * 119.99957 * 359.97438 * 8 7 6 10 10 N 1.34773 * 120.00279 * 180.02562 * 8 7 6 11 11 C 1.46501 * 120.00023 * 179.97438 * 10 8 7 12 12 C 1.53004 * 109.47145 * 179.97438 * 11 10 8 13 13 H 1.08995 * 109.47239 * 54.99691 * 12 11 10 14 14 C 1.52998 * 109.47086 * 175.00199 * 12 11 10 15 15 C 1.53004 * 109.47086 * 180.02562 * 14 12 11 16 16 C 1.52999 * 109.46742 * 299.99754 * 15 14 12 17 17 H 1.09008 * 109.47027 * 299.99707 * 16 15 14 18 18 C 1.53002 * 109.47082 * 180.02562 * 16 15 14 19 19 O 1.42898 * 109.46989 * 174.99424 * 18 16 15 20 20 C 1.52991 * 109.47396 * 59.99874 * 16 15 14 21 21 C 1.52996 * 109.46785 * 294.99581 * 12 11 10 22 22 C 1.37685 * 109.87352 * 0.02562 * 6 5 4 23 23 C 1.39088 * 133.51510 * 179.97438 * 22 6 5 24 24 C 1.37785 * 119.78038 * 180.02562 * 23 22 6 25 25 C 1.38798 * 120.66545 * 0.02562 * 24 23 22 26 26 C 1.36656 * 120.52612 * 359.97438 * 25 24 23 27 27 C 1.39593 * 119.76666 * 0.02562 * 26 25 24 28 28 H 0.96705 * 113.99427 * 299.99746 * 1 2 3 29 29 H 1.08998 * 109.47267 * 119.99891 * 2 1 3 30 30 H 1.48500 * 110.00112 * 178.68548 * 3 2 1 31 31 H 1.48501 * 109.99614 * 299.99959 * 3 2 1 32 32 H 1.08005 * 125.03160 * 359.69843 * 5 4 2 33 33 H 1.09003 * 109.46996 * 25.02642 * 7 6 5 34 34 H 1.09000 * 109.46996 * 145.02583 * 7 6 5 35 35 H 0.96998 * 120.00039 * 359.97438 * 10 8 7 36 36 H 1.09003 * 109.47144 * 299.99503 * 11 10 8 37 37 H 1.09000 * 109.47291 * 59.99715 * 11 10 8 38 38 H 1.09004 * 109.46696 * 299.99248 * 14 12 11 39 39 H 1.08995 * 109.47497 * 59.99650 * 14 12 11 40 40 H 1.08995 * 109.47239 * 59.99492 * 15 14 12 41 41 H 1.08997 * 109.47345 * 179.97438 * 15 14 12 42 42 H 1.08997 * 109.46826 * 294.99702 * 18 16 15 43 43 H 1.09008 * 109.47064 * 54.99739 * 18 16 15 44 44 H 0.96703 * 114.00038 * 179.97438 * 19 18 16 45 45 H 1.09001 * 109.47445 * 60.00099 * 20 16 15 46 46 H 1.09007 * 109.47419 * 180.02562 * 20 16 15 47 47 H 1.09003 * 109.47606 * 300.00222 * 21 12 11 48 48 H 1.09006 * 109.47029 * 60.00204 * 21 12 11 49 49 H 1.07996 * 120.10921 * 0.02562 * 23 22 6 50 50 H 1.07995 * 119.67135 * 180.02562 * 24 23 22 51 51 H 1.08001 * 119.73109 * 179.97438 * 25 24 23 52 52 H 1.07999 * 120.11680 * 179.97438 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.4612 -0.1377 -2.3228 6 7 2.8035 -1.0991 -3.2343 7 6 3.4093 -0.8406 -4.5429 8 6 2.3303 -0.7830 -5.5934 9 8 1.1696 -0.9428 -5.2799 10 7 2.6552 -0.5551 -6.8813 11 6 1.6063 -0.4998 -7.9026 12 6 2.2389 -0.2296 -9.2693 13 1 3.0026 -0.9806 -9.4710 14 6 1.1603 -0.2954 -10.3525 15 6 1.7930 -0.0258 -11.7192 16 6 2.4325 1.3641 -11.7200 17 1 1.6688 2.1155 -11.5185 18 6 3.0646 1.6340 -13.0869 19 8 3.5592 2.9741 -13.1268 20 6 3.5109 1.4300 -10.6368 21 6 2.8778 1.1606 -9.2696 22 6 2.4939 -2.3457 -2.7384 23 6 2.6285 -3.6362 -3.2394 24 6 2.2136 -4.7106 -2.4832 25 6 1.6611 -4.5191 -1.2244 26 6 1.5195 -3.2599 -0.7128 27 6 1.9332 -2.1569 -1.4618 28 1 -0.3932 0.4417 0.7651 29 1 1.7924 -0.5138 0.8900 30 1 3.5346 1.7703 0.0320 31 1 1.5615 2.4678 -1.2085 32 1 2.5933 0.9250 -2.4634 33 1 3.9409 0.1107 -4.5156 34 1 4.1088 -1.6410 -4.7839 35 1 3.5835 -0.4277 -7.1321 36 1 1.0748 -1.4511 -7.9295 37 1 0.9066 0.3006 -7.6619 38 1 0.7051 -1.2858 -10.3522 39 1 0.3965 0.4556 -10.1508 40 1 2.5566 -0.7771 -11.9207 41 1 1.0248 -0.0731 -12.4910 42 1 3.8874 0.9380 -13.2504 43 1 2.3149 1.5000 -13.8668 44 1 3.9747 3.2152 -13.9660 45 1 4.2746 0.6787 -10.8382 46 1 3.9662 2.4204 -10.6370 47 1 2.1140 1.9116 -9.0679 48 1 3.6462 1.2074 -8.4979 49 1 3.0568 -3.7955 -4.2179 50 1 2.3193 -5.7119 -2.8737 51 1 1.3405 -5.3721 -0.6447 52 1 1.0884 -3.1184 0.2673 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14939082_9818708.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:03:45 Heat of formation + Delta-G solvation = -64.424645 kcal Electronic energy + Delta-G solvation = -31907.317886 eV Core-core repulsion = 27645.158553 eV Total energy + Delta-G solvation = -4262.159334 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.193 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -42.46342 -40.91070 -39.97735 -37.96901 -37.73180 -37.44580 -35.84889 -34.17083 -32.95832 -31.87958 -31.35249 -30.16809 -29.33750 -27.86372 -25.70869 -24.69710 -23.90083 -23.54907 -22.53156 -21.83916 -21.56504 -20.87525 -20.42151 -18.61439 -18.31772 -18.21241 -18.11094 -17.64698 -16.86862 -16.66785 -16.32891 -16.28842 -16.05467 -15.62134 -15.43261 -15.35245 -15.00931 -14.94055 -14.71836 -14.69348 -14.61385 -14.31158 -14.12966 -13.99900 -13.64389 -13.46674 -13.31164 -13.27022 -12.93918 -12.65006 -12.60923 -12.43097 -12.34297 -12.22478 -12.05514 -11.88956 -11.62485 -11.57079 -11.33421 -11.21884 -11.04356 -10.91883 -10.40967 -10.21349 -10.08055 -9.01296 -8.52170 -4.95506 0.28152 0.80808 1.37866 1.40069 1.43963 1.68247 1.77499 2.04240 2.14028 3.10900 3.11278 3.45134 3.47437 3.49268 3.57110 3.60819 3.69864 3.77531 3.83451 3.86965 3.93032 4.03484 4.11452 4.14972 4.28208 4.31456 4.33018 4.35551 4.37881 4.40791 4.47106 4.49253 4.55375 4.62547 4.70805 4.71756 4.78289 4.79577 4.91563 4.92563 4.98359 5.00195 5.04366 5.08144 5.13117 5.25580 5.26705 5.31002 5.39822 5.65573 5.81274 5.86831 5.90400 6.16262 6.32143 6.38455 6.60542 6.84942 7.04442 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.032 4.032 3 Si 0.682 3.318 4 C -0.151 4.151 5 C 0.065 3.935 6 N -0.465 5.465 7 C 0.091 3.909 8 C 0.489 3.511 9 O -0.511 6.511 10 N -0.727 5.727 11 C 0.124 3.876 12 C -0.099 4.099 13 H 0.078 0.922 14 C -0.110 4.110 15 C -0.112 4.112 16 C -0.089 4.089 17 H 0.078 0.922 18 C 0.078 3.922 19 O -0.574 6.574 20 C -0.110 4.110 21 C -0.116 4.116 22 C 0.109 3.891 23 C -0.127 4.127 24 C -0.096 4.096 25 C -0.145 4.145 26 C -0.063 4.063 27 C -0.085 4.085 28 H 0.377 0.623 29 H 0.070 0.930 30 H -0.256 1.256 31 H -0.254 1.254 32 H 0.162 0.838 33 H 0.120 0.880 34 H 0.119 0.881 35 H 0.401 0.599 36 H 0.070 0.930 37 H 0.070 0.930 38 H 0.069 0.931 39 H 0.068 0.932 40 H 0.065 0.935 41 H 0.067 0.933 42 H 0.045 0.955 43 H 0.045 0.955 44 H 0.380 0.620 45 H 0.060 0.940 46 H 0.071 0.929 47 H 0.066 0.934 48 H 0.061 0.939 49 H 0.115 0.885 50 H 0.126 0.874 51 H 0.124 0.876 52 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.398 1.088 -2.155 5.017 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.144 4.144 3 Si 0.583 3.417 4 C -0.159 4.159 5 C -0.060 4.060 6 N -0.149 5.149 7 C -0.035 4.035 8 C 0.272 3.728 9 O -0.385 6.385 10 N -0.381 5.381 11 C 0.000 4.000 12 C -0.118 4.118 13 H 0.097 0.903 14 C -0.148 4.148 15 C -0.150 4.150 16 C -0.107 4.107 17 H 0.096 0.904 18 C 0.000 4.000 19 O -0.379 6.379 20 C -0.147 4.147 21 C -0.153 4.153 22 C 0.005 3.995 23 C -0.148 4.148 24 C -0.115 4.115 25 C -0.164 4.164 26 C -0.082 4.082 27 C -0.089 4.089 28 H 0.224 0.776 29 H 0.088 0.912 30 H -0.181 1.181 31 H -0.179 1.179 32 H 0.179 0.821 33 H 0.138 0.862 34 H 0.137 0.863 35 H 0.236 0.764 36 H 0.088 0.912 37 H 0.088 0.912 38 H 0.088 0.912 39 H 0.087 0.913 40 H 0.084 0.916 41 H 0.086 0.914 42 H 0.063 0.937 43 H 0.064 0.936 44 H 0.227 0.773 45 H 0.079 0.921 46 H 0.090 0.910 47 H 0.085 0.915 48 H 0.080 0.920 49 H 0.133 0.867 50 H 0.144 0.856 51 H 0.142 0.858 52 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 4.012 1.342 -2.592 4.961 hybrid contribution 0.735 -0.435 -1.188 1.463 sum 4.747 0.907 -3.780 6.136 Atomic orbital electron populations 1.86579 1.17603 1.81649 1.49232 1.23938 0.85275 1.09022 0.96143 0.95303 0.80709 0.77844 0.87805 1.19530 1.08390 0.91758 0.96192 1.21403 1.01969 0.93550 0.89103 1.43157 1.53890 1.04613 1.13207 1.21590 0.94652 1.05885 0.81361 1.20971 0.90770 0.77490 0.83559 1.90834 1.19813 1.47069 1.80786 1.45962 1.11211 1.73920 1.07028 1.21466 0.90017 1.02460 0.86027 1.21439 0.98521 0.98269 0.93525 0.90323 1.21471 0.97359 1.02470 0.93545 1.21500 1.00134 0.96041 0.97308 1.21173 0.98120 0.97603 0.93831 0.90363 1.22243 0.97063 0.83438 0.97219 1.86471 1.80110 1.30224 1.41135 1.21522 0.97338 1.02358 0.93519 1.21641 1.00085 0.96193 0.97389 1.18171 1.01407 0.85828 0.94109 1.19953 1.05339 0.89171 1.00312 1.20827 0.98323 0.97916 0.94456 1.20669 1.02424 0.96904 0.96449 1.20279 0.97792 0.90840 0.99259 1.18926 1.03199 0.92593 0.94215 0.77578 0.91242 1.18059 1.17903 0.82094 0.86161 0.86316 0.76418 0.91184 0.91205 0.91217 0.91310 0.91602 0.91388 0.93677 0.93627 0.77263 0.92110 0.91025 0.91538 0.92037 0.86689 0.85636 0.85802 0.85876 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.50 12.86 -35.23 -0.45 -1.95 16 2 C -0.03 -0.07 3.05 36.01 0.11 0.04 16 3 Si 0.68 -0.02 30.79 -169.99 -5.23 -5.25 16 4 C -0.15 -0.77 5.61 -102.71 -0.58 -1.34 16 5 C 0.06 0.27 9.89 -16.73 -0.17 0.11 16 6 N -0.47 -1.70 2.27 -115.71 -0.26 -1.96 16 7 C 0.09 -0.04 6.48 -5.19 -0.03 -0.08 16 8 C 0.49 0.93 7.90 -10.99 -0.09 0.84 16 9 O -0.51 -3.78 16.42 5.55 0.09 -3.68 16 10 N -0.73 0.90 5.28 -60.29 -0.32 0.58 16 11 C 0.12 -0.06 5.06 -4.04 -0.02 -0.08 16 12 C -0.10 0.23 2.22 -90.62 -0.20 0.02 16 13 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 14 C -0.11 0.21 5.20 -26.73 -0.14 0.07 16 15 C -0.11 0.23 5.20 -26.73 -0.14 0.09 16 16 C -0.09 0.09 2.43 -90.62 -0.22 -0.13 16 17 H 0.08 0.02 8.14 -51.92 -0.42 -0.40 16 18 C 0.08 -0.08 6.43 37.16 0.24 0.16 16 19 O -0.57 -0.16 13.20 -35.23 -0.46 -0.63 16 20 C -0.11 0.13 5.10 -26.71 -0.14 -0.01 16 21 C -0.12 0.22 5.08 -26.70 -0.14 0.09 16 22 C 0.11 0.57 6.80 -83.99 -0.57 0.00 16 23 C -0.13 -0.48 10.00 -39.43 -0.39 -0.87 16 24 C -0.10 -0.29 10.01 -39.54 -0.40 -0.68 16 25 C -0.15 -0.48 9.97 -39.95 -0.40 -0.87 16 26 C -0.06 -0.29 10.05 -39.65 -0.40 -0.68 16 27 C -0.09 -0.51 6.35 -105.14 -0.67 -1.17 16 28 H 0.38 -1.05 8.74 45.56 0.40 -0.65 16 29 H 0.07 0.04 7.96 -51.93 -0.41 -0.38 16 30 H -0.26 -0.53 7.11 56.52 0.40 -0.13 16 31 H -0.25 -0.74 7.04 56.52 0.40 -0.34 16 32 H 0.16 0.38 6.30 -52.48 -0.33 0.04 16 33 H 0.12 -0.43 8.12 -51.93 -0.42 -0.85 16 34 H 0.12 -0.36 8.14 -51.93 -0.42 -0.79 16 35 H 0.40 -1.71 7.66 -40.82 -0.31 -2.02 16 36 H 0.07 0.06 8.14 -51.93 -0.42 -0.37 16 37 H 0.07 0.08 8.14 -51.93 -0.42 -0.35 16 38 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 39 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 40 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 41 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 42 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 43 H 0.05 -0.08 8.14 -51.92 -0.42 -0.50 16 44 H 0.38 -1.41 9.12 45.56 0.42 -1.00 16 45 H 0.06 -0.09 8.14 -51.93 -0.42 -0.52 16 46 H 0.07 0.02 7.82 -51.93 -0.41 -0.38 16 47 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 48 H 0.06 -0.17 7.18 -51.93 -0.37 -0.54 16 49 H 0.12 0.19 8.06 -52.49 -0.42 -0.23 16 50 H 0.13 0.07 8.06 -52.49 -0.42 -0.35 16 51 H 0.12 0.13 8.06 -52.49 -0.42 -0.30 16 52 H 0.12 0.37 8.06 -52.49 -0.42 -0.06 16 LS Contribution 418.79 15.07 6.31 6.31 Total: 0.00 -12.53 418.79 -12.50 -25.02 By element: Atomic # 1 Polarization: -6.10 SS G_CDS: -7.83 Total: -13.93 kcal Atomic # 6 Polarization: -0.17 SS G_CDS: -4.33 Total: -4.50 kcal Atomic # 7 Polarization: -0.80 SS G_CDS: -0.58 Total: -1.38 kcal Atomic # 8 Polarization: -5.44 SS G_CDS: -0.83 Total: -6.27 kcal Atomic # 14 Polarization: -0.02 SS G_CDS: -5.23 Total: -5.25 kcal Total LS contribution 6.31 Total: 6.31 kcal Total: -12.53 -12.50 -25.02 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14939082_9818708.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.400 kcal (2) G-P(sol) polarization free energy of solvation -12.530 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.930 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.495 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.025 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.425 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds