Wall clock time and date at job start Sun Mar 7 2021 02:46:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17395 * 1 3 3 C 1.47203 * 179.97438 * 2 1 4 4 O 1.42899 * 109.47221 * 43.58944 * 3 2 1 5 5 C 1.42906 * 113.99554 * 180.02562 * 4 3 2 6 6 H 1.08998 * 109.47029 * 329.99306 * 5 4 3 7 7 C 1.52996 * 109.47268 * 90.00060 * 5 4 3 8 8 C 1.52997 * 109.46822 * 179.97438 * 7 5 4 9 9 C 1.53001 * 109.46976 * 299.99435 * 8 7 5 10 10 H 1.08998 * 109.47139 * 300.00017 * 9 8 7 11 11 N 1.46500 * 109.47049 * 180.02562 * 9 8 7 12 12 C 1.34781 * 120.00150 * 84.99859 * 11 9 8 13 13 O 1.21691 * 120.00076 * 5.15816 * 12 11 9 14 14 C 1.46682 * 119.99875 * 185.15845 * 12 11 9 15 15 C 1.37871 * 126.23379 * 354.31218 * 14 12 11 16 16 C 1.39837 * 107.08521 * 179.97438 * 15 14 12 17 17 C 1.50696 * 126.06643 * 180.02562 * 16 15 14 18 18 O 1.42904 * 109.47149 * 65.00218 * 17 16 15 19 19 Si 1.86308 * 109.46810 * 184.99720 * 17 16 15 20 20 C 1.35452 * 107.86111 * 0.25950 * 16 15 14 21 21 N 1.35534 * 108.87722 * 359.57426 * 20 16 15 22 22 C 1.46497 * 125.68299 * 180.16945 * 21 20 16 23 23 C 1.52991 * 109.47110 * 60.00354 * 9 8 7 24 24 C 1.52997 * 109.47116 * 300.00017 * 23 9 8 25 25 H 4.38446 * 5.44431 * 180.02562 * 4 1 2 26 26 H 1.08993 * 109.46965 * 283.58443 * 3 2 1 27 27 H 1.08999 * 109.46555 * 163.58516 * 3 2 1 28 28 H 1.09003 * 109.46520 * 299.99303 * 7 5 4 29 29 H 1.09001 * 109.47388 * 59.99252 * 7 5 4 30 30 H 1.09008 * 109.47138 * 179.97438 * 8 7 5 31 31 H 1.09001 * 109.47609 * 60.00055 * 8 7 5 32 32 H 0.97003 * 120.00107 * 265.00479 * 11 9 8 33 33 H 1.08002 * 126.45913 * 359.97438 * 15 14 12 34 34 H 1.08995 * 109.47436 * 304.99866 * 17 16 15 35 35 H 0.96701 * 114.00216 * 60.00152 * 18 17 16 36 36 H 1.48499 * 109.99600 * 179.97438 * 19 17 16 37 37 H 1.48500 * 110.00133 * 301.32099 * 19 17 16 38 38 H 1.08006 * 125.55919 * 179.73327 * 20 16 15 39 39 H 1.09004 * 109.47095 * 274.25939 * 22 21 20 40 40 H 1.09003 * 109.46989 * 34.25693 * 22 21 20 41 41 H 1.08997 * 109.47058 * 154.25693 * 22 21 20 42 42 H 1.09001 * 109.47071 * 60.00232 * 23 9 8 43 43 H 1.08999 * 109.47096 * 179.97438 * 23 9 8 44 44 H 1.08998 * 109.47009 * 180.02562 * 24 23 9 45 45 H 1.09001 * 109.47235 * 299.99510 * 24 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1739 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 8 3.1228 -0.9749 -0.9289 5 6 4.5474 -1.0563 -1.0062 6 1 4.9795 -0.0802 -0.7862 7 6 5.0557 -2.0801 0.0108 8 6 6.5809 -2.1676 -0.0724 9 6 6.9906 -2.6016 -1.4812 10 1 6.5581 -3.5777 -1.7009 11 7 8.4510 -2.6860 -1.5608 12 6 9.0834 -3.8104 -1.1703 13 8 8.4382 -4.7881 -0.8406 14 6 10.5492 -3.8555 -1.1427 15 6 11.4035 -2.8700 -1.5898 16 6 12.7072 -3.3273 -1.3737 17 6 13.9748 -2.5838 -1.7072 18 8 14.0618 -1.4057 -0.9030 19 14 15.4441 -3.6777 -1.3671 20 6 12.6283 -4.5592 -0.8161 21 7 11.3225 -4.8894 -0.6651 22 6 10.8180 -6.1407 -0.0943 23 6 6.4823 -1.5780 -2.4983 24 6 4.9571 -1.4903 -2.4150 25 1 -1.0499 -0.0001 -0.0003 26 1 3.0094 -0.2405 0.9989 27 1 3.0088 0.9866 -0.2904 28 1 4.7634 -1.7711 1.0144 29 1 4.6235 -3.0563 -0.2091 30 1 6.9431 -2.8967 0.6525 31 1 7.0135 -1.1916 0.1473 32 1 8.9629 -1.9327 -1.8945 33 1 11.1193 -1.9233 -2.0250 34 1 13.9658 -2.3046 -2.7608 35 1 14.0745 -1.5789 0.0483 36 1 16.7005 -2.9562 -1.6926 37 1 15.4501 -4.0912 0.0592 38 1 13.4689 -5.1764 -0.5351 39 1 10.7642 -6.9002 -0.8743 40 1 11.4905 -6.4773 0.6947 41 1 9.8240 -5.9757 0.3214 42 1 6.9149 -0.6019 -2.2786 43 1 6.7746 -1.8869 -3.5019 44 1 4.5950 -0.7614 -3.1399 45 1 4.5246 -2.4664 -2.6348 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14940684_10803934.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:46:58 Heat of formation + Delta-G solvation = -9.622317 kcal Electronic energy + Delta-G solvation = -26402.235446 eV Core-core repulsion = 22581.753898 eV Total energy + Delta-G solvation = -3820.481548 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.162 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -42.56476 -40.91103 -39.73028 -37.95838 -37.67994 -35.16908 -34.07720 -33.69093 -31.96657 -31.31463 -29.54034 -28.35541 -27.65326 -25.73360 -24.31898 -23.85520 -22.61372 -21.40681 -21.08173 -20.39153 -19.35961 -18.86094 -17.92645 -17.75912 -17.24680 -16.86265 -16.80357 -16.51428 -16.25575 -15.92417 -15.57308 -15.49408 -15.08246 -15.01332 -14.85869 -14.41531 -14.28079 -14.00904 -13.82555 -13.54980 -13.48370 -13.34117 -13.28368 -13.18982 -12.69415 -12.39739 -12.36475 -12.24613 -11.86252 -11.77768 -11.70163 -11.35151 -11.26652 -11.01880 -10.45580 -10.44961 -10.12390 -9.71703 -9.27597 -4.94509 0.44212 1.32581 1.50651 1.53514 1.57491 1.62462 1.87405 1.99622 2.27689 2.36921 2.86281 3.47021 3.48191 3.50439 3.64810 3.70941 3.77767 3.90170 3.94453 4.04006 4.06031 4.15239 4.16881 4.24128 4.25046 4.30773 4.35167 4.35509 4.40387 4.54920 4.64184 4.69501 4.70472 4.76032 4.86849 4.93840 4.99343 5.02785 5.06955 5.14400 5.19404 5.23600 5.42935 5.65835 5.88764 6.10382 6.14613 6.44930 6.51217 6.63681 7.16850 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.199 4.199 3 C 0.173 3.827 4 O -0.375 6.375 5 C 0.089 3.911 6 H 0.066 0.934 7 C -0.139 4.139 8 C -0.126 4.126 9 C 0.145 3.855 10 H 0.095 0.905 11 N -0.716 5.716 12 C 0.592 3.408 13 O -0.546 6.546 14 C -0.054 4.054 15 C -0.113 4.113 16 C -0.205 4.205 17 C -0.037 4.037 18 O -0.532 6.532 19 Si 0.680 3.320 20 C 0.027 3.973 21 N -0.404 5.404 22 C 0.062 3.938 23 C -0.124 4.124 24 C -0.112 4.112 25 H 0.222 0.778 26 H 0.074 0.926 27 H 0.075 0.925 28 H 0.069 0.931 29 H 0.076 0.924 30 H 0.071 0.929 31 H 0.067 0.933 32 H 0.403 0.597 33 H 0.145 0.855 34 H 0.115 0.885 35 H 0.374 0.626 36 H -0.258 1.258 37 H -0.261 1.261 38 H 0.173 0.827 39 H 0.081 0.919 40 H 0.084 0.916 41 H 0.105 0.895 42 H 0.072 0.928 43 H 0.079 0.921 44 H 0.078 0.922 45 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.366 0.225 -0.267 1.410 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.186 4.186 2 C -0.199 4.199 3 C 0.097 3.903 4 O -0.295 6.295 5 C 0.032 3.968 6 H 0.084 0.916 7 C -0.178 4.178 8 C -0.165 4.165 9 C 0.041 3.959 10 H 0.113 0.887 11 N -0.367 5.367 12 C 0.381 3.619 13 O -0.425 6.425 14 C -0.167 4.167 15 C -0.139 4.139 16 C -0.212 4.212 17 C -0.148 4.148 18 O -0.338 6.338 19 Si 0.581 3.419 20 C -0.110 4.110 21 N -0.075 5.075 22 C -0.079 4.079 23 C -0.162 4.162 24 C -0.150 4.150 25 H 0.239 0.761 26 H 0.092 0.908 27 H 0.092 0.908 28 H 0.088 0.912 29 H 0.095 0.905 30 H 0.090 0.910 31 H 0.086 0.914 32 H 0.238 0.762 33 H 0.163 0.837 34 H 0.133 0.867 35 H 0.221 0.779 36 H -0.183 1.183 37 H -0.186 1.186 38 H 0.190 0.810 39 H 0.099 0.901 40 H 0.103 0.897 41 H 0.124 0.876 42 H 0.091 0.909 43 H 0.098 0.902 44 H 0.097 0.903 45 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 1.356 -0.755 -0.094 1.554 hybrid contribution -0.089 1.143 1.025 1.538 sum 1.267 0.388 0.931 1.619 Atomic orbital electron populations 1.25046 0.95980 0.98690 0.98899 1.22511 0.93899 1.01799 1.01707 1.19111 0.84830 0.92546 0.93767 1.88000 1.21268 1.58552 1.61666 1.22201 0.80339 0.98447 0.95841 0.91599 1.22006 0.95150 1.00952 0.99655 1.21884 0.95370 1.02217 0.97038 1.21070 0.78875 1.00832 0.95115 0.88739 1.45693 1.07722 1.16808 1.66463 1.16964 0.85242 0.82927 0.76805 1.90802 1.67695 1.34656 1.49304 1.20043 0.91477 0.91971 1.13199 1.21187 0.91571 0.98301 1.02849 1.19721 0.95758 0.96136 1.09568 1.24269 1.00643 0.91547 0.98353 1.86588 1.95452 1.30483 1.21274 0.95290 0.76942 0.85358 0.84273 1.21886 0.85903 0.97913 1.05306 1.43816 1.05265 1.14354 1.44112 1.22376 1.02674 0.83262 0.99555 1.21772 0.95518 0.99278 0.99589 1.21507 0.94432 1.03508 0.95589 0.76079 0.90837 0.90763 0.91240 0.90499 0.90983 0.91422 0.76151 0.83713 0.86750 0.77857 1.18270 1.18573 0.81035 0.90053 0.89748 0.87627 0.90893 0.90193 0.90338 0.90424 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.24 19.25 29.55 0.57 0.33 16 2 C -0.20 -0.50 13.73 -37.12 -0.51 -1.01 16 3 C 0.17 0.10 6.22 34.37 0.21 0.31 16 4 O -0.38 -0.72 9.95 -35.23 -0.35 -1.07 16 5 C 0.09 -0.06 2.61 -26.73 -0.07 -0.13 16 6 H 0.07 -0.13 7.79 -51.93 -0.40 -0.54 16 7 C -0.14 0.07 5.54 -26.73 -0.15 -0.07 16 8 C -0.13 0.09 5.49 -26.73 -0.15 -0.06 16 9 C 0.15 -0.11 2.50 -67.93 -0.17 -0.28 16 10 H 0.09 0.12 7.51 -51.93 -0.39 -0.27 16 11 N -0.72 0.44 5.06 -55.12 -0.28 0.16 16 12 C 0.59 1.29 7.73 -12.85 -0.10 1.19 16 13 O -0.55 -2.74 14.29 5.20 0.07 -2.67 16 14 C -0.05 -0.08 6.88 -81.98 -0.56 -0.65 16 15 C -0.11 -0.05 10.29 -39.12 -0.40 -0.45 16 16 C -0.21 -0.02 5.43 -105.02 -0.57 -0.59 16 17 C -0.04 0.02 3.02 36.00 0.11 0.13 16 18 O -0.53 -0.58 12.88 -35.23 -0.45 -1.03 16 19 Si 0.68 -0.92 30.60 -169.99 -5.20 -6.12 16 20 C 0.03 -0.01 9.94 -16.91 -0.17 -0.18 16 21 N -0.40 -0.33 3.16 -120.23 -0.38 -0.71 16 22 C 0.06 -0.05 10.64 59.85 0.64 0.59 16 23 C -0.12 0.30 5.39 -26.74 -0.14 0.16 16 24 C -0.11 0.14 5.57 -26.73 -0.15 -0.01 16 25 H 0.22 -0.45 7.80 -54.10 -0.42 -0.87 16 26 H 0.07 -0.07 7.87 -51.93 -0.41 -0.48 16 27 H 0.07 -0.09 8.09 -51.93 -0.42 -0.51 16 28 H 0.07 -0.05 7.87 -51.93 -0.41 -0.46 16 29 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 30 H 0.07 0.08 8.14 -51.92 -0.42 -0.34 16 31 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 32 H 0.40 -1.12 7.51 -40.82 -0.31 -1.43 16 33 H 0.15 -0.19 7.45 -52.49 -0.39 -0.58 16 34 H 0.11 -0.11 7.96 -51.93 -0.41 -0.53 16 35 H 0.37 -0.58 8.70 45.56 0.40 -0.18 16 36 H -0.26 -0.56 7.11 56.52 0.40 -0.16 16 37 H -0.26 -0.11 7.11 56.52 0.40 0.29 16 38 H 0.17 -0.50 6.21 -52.48 -0.33 -0.83 16 39 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 40 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 41 H 0.11 0.10 6.23 -51.93 -0.32 -0.22 16 42 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 43 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 44 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 45 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 LS Contribution 374.64 15.07 5.65 5.65 Total: 0.00 -8.66 374.64 -9.38 -18.04 By element: Atomic # 1 Polarization: -4.70 SS G_CDS: -6.82 Total: -11.52 kcal Atomic # 6 Polarization: 0.90 SS G_CDS: -1.61 Total: -0.71 kcal Atomic # 7 Polarization: 0.11 SS G_CDS: -0.66 Total: -0.55 kcal Atomic # 8 Polarization: -4.04 SS G_CDS: -0.73 Total: -4.77 kcal Atomic # 14 Polarization: -0.92 SS G_CDS: -5.20 Total: -6.12 kcal Total LS contribution 5.65 Total: 5.65 kcal Total: -8.66 -9.38 -18.04 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_10803934.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.413 kcal (2) G-P(sol) polarization free energy of solvation -8.657 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.244 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.378 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.035 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.622 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds