Wall clock time and date at job start Sun Mar 7 2021 02:47:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17396 * 1 3 3 C 1.47202 * 179.97438 * 2 1 4 4 O 1.42899 * 109.47086 * 184.69350 * 3 2 1 5 5 C 1.42890 * 114.00407 * 180.02562 * 4 3 2 6 6 H 1.09007 * 109.47300 * 329.99862 * 5 4 3 7 7 C 1.53006 * 109.47432 * 89.99709 * 5 4 3 8 8 C 1.53000 * 109.47253 * 180.02562 * 7 5 4 9 9 C 1.52998 * 109.47115 * 300.00502 * 8 7 5 10 10 H 1.09007 * 109.46761 * 299.99624 * 9 8 7 11 11 N 1.46499 * 109.47145 * 180.02562 * 9 8 7 12 12 C 1.34777 * 120.00195 * 84.99285 * 11 9 8 13 13 O 1.21723 * 120.00037 * 0.02562 * 12 11 9 14 14 C 1.46565 * 119.99949 * 180.27569 * 12 11 9 15 15 C 1.40858 * 126.57869 * 179.72414 * 14 12 11 16 16 C 1.40081 * 132.86759 * 0.02562 * 15 14 12 17 17 C 1.36453 * 119.25493 * 180.02562 * 16 15 14 18 18 C 1.50703 * 120.29744 * 179.97438 * 17 16 15 19 19 O 1.42891 * 109.47337 * 119.97170 * 18 17 16 20 20 Si 1.86297 * 109.46956 * 239.97543 * 18 17 16 21 21 C 1.40157 * 119.40906 * 359.90696 * 17 16 15 22 22 C 1.35183 * 120.31842 * 0.03886 * 21 17 16 23 23 N 1.36244 * 120.70819 * 0.02562 * 22 21 17 24 24 N 1.40007 * 132.01277 * 179.97438 * 23 22 21 25 25 C 1.30743 * 109.60515 * 179.75205 * 24 23 22 26 26 C 1.52995 * 109.47337 * 59.99951 * 9 8 7 27 27 C 1.53000 * 109.47216 * 299.99724 * 26 9 8 28 28 H 4.38452 * 5.44509 * 179.97438 * 4 1 2 29 29 H 1.09000 * 109.47023 * 64.69489 * 3 2 1 30 30 H 1.09003 * 109.47330 * 304.69578 * 3 2 1 31 31 H 1.08993 * 109.46938 * 300.00474 * 7 5 4 32 32 H 1.08998 * 109.46585 * 60.00063 * 7 5 4 33 33 H 1.09001 * 109.46796 * 180.02562 * 8 7 5 34 34 H 1.08999 * 109.46883 * 60.00256 * 8 7 5 35 35 H 0.97000 * 120.00069 * 265.00013 * 11 9 8 36 36 H 1.08000 * 120.37520 * 359.92950 * 16 15 14 37 37 H 1.09000 * 109.46969 * 359.97066 * 18 17 16 38 38 H 0.96701 * 114.00421 * 60.00522 * 19 18 17 39 39 H 1.48505 * 110.00225 * 58.68157 * 20 18 17 40 40 H 1.48506 * 109.99924 * 179.97438 * 20 18 17 41 41 H 1.08002 * 119.84238 * 180.02562 * 21 17 16 42 42 H 1.08004 * 119.64713 * 180.02562 * 22 21 17 43 43 H 1.08001 * 125.63164 * 180.26327 * 25 24 23 44 44 H 1.08998 * 109.46913 * 60.00238 * 26 9 8 45 45 H 1.09002 * 109.46851 * 180.02562 * 26 9 8 46 46 H 1.09001 * 109.46954 * 179.97438 * 27 26 9 47 47 H 1.08999 * 109.47097 * 300.00253 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 8 3.1217 1.3436 0.1102 5 6 4.5461 1.4569 0.1189 6 1 4.9793 0.5593 0.5605 7 6 5.0539 1.6155 -1.3157 8 6 6.5791 1.7361 -1.3064 9 6 6.9891 2.9581 -0.4822 10 1 6.5563 3.8559 -0.9237 11 7 8.4494 3.0740 -0.4738 12 6 9.0813 3.7042 -1.4838 13 8 8.4385 4.1776 -2.4027 14 6 10.5428 3.8148 -1.4784 15 6 11.3413 4.4349 -2.4591 16 6 11.0385 5.0938 -3.6577 17 6 12.0541 5.6023 -4.4140 18 6 11.7552 6.3151 -5.7078 19 8 12.2407 7.6570 -5.6355 20 14 12.5932 5.4263 -7.1143 21 6 13.3776 5.4571 -3.9762 22 6 13.6462 4.8184 -2.8155 23 7 12.6392 4.3061 -2.0540 24 7 12.6438 3.6140 -0.8370 25 6 11.4161 3.3269 -0.4910 26 6 6.4813 2.7995 0.9523 27 6 4.9561 2.6789 0.9431 28 1 -1.0503 -0.0004 -0.0002 29 1 3.0095 -0.4384 -0.9291 30 1 3.0096 -0.5842 0.8449 31 1 4.7622 0.7447 -1.9027 32 1 4.6207 2.5130 -1.7572 33 1 6.9408 1.8495 -2.3284 34 1 7.0119 0.8383 -0.8650 35 1 8.9617 2.6970 0.2586 36 1 10.0130 5.1968 -3.9803 37 1 10.6783 6.3269 -5.8757 38 1 13.1940 7.7230 -5.4872 39 1 12.1203 4.0201 -7.1803 40 1 12.3057 6.1190 -8.3961 41 1 14.1867 5.8573 -4.5692 42 1 14.6701 4.7131 -2.4882 43 1 11.1216 2.8003 0.4047 44 1 6.9142 1.9017 1.3937 45 1 6.7730 3.6703 1.5394 46 1 4.5945 2.5654 1.9651 47 1 4.5234 3.5767 0.5017 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14940684_11618758.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:47:05 Heat of formation + Delta-G solvation = 45.844953 kcal Electronic energy + Delta-G solvation = -30542.576346 eV Core-core repulsion = 26274.395707 eV Total energy + Delta-G solvation = -4268.180639 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.157 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -43.31126 -40.94650 -39.82091 -39.31502 -37.75760 -37.27607 -34.89651 -34.23090 -33.81062 -32.11640 -31.90447 -30.82269 -29.44746 -27.75590 -27.13233 -25.09024 -24.09871 -23.77857 -23.17570 -22.58149 -21.35889 -20.90963 -19.38951 -19.00471 -18.58416 -17.98851 -17.87329 -17.60404 -16.99049 -16.95219 -16.69378 -16.50625 -16.24638 -15.89210 -15.62053 -15.46173 -15.17765 -14.93156 -14.72354 -14.64218 -14.25719 -14.23648 -14.04090 -13.75299 -13.56277 -13.43685 -13.26180 -13.19372 -12.65002 -12.43772 -12.32480 -12.19494 -12.17474 -11.96781 -11.80758 -11.66508 -11.52573 -11.31645 -11.22662 -10.83062 -10.74270 -10.41128 -10.34579 -9.97903 -8.78462 -5.19942 -0.57793 -0.16681 0.98452 1.05898 1.11320 1.56036 1.56542 1.86111 1.89136 2.04759 2.23817 2.60213 2.88790 3.04555 3.15639 3.31985 3.42822 3.50253 3.59013 3.63122 3.70874 3.83018 3.95105 4.01044 4.07626 4.09047 4.12831 4.20172 4.21899 4.27660 4.31649 4.38408 4.40489 4.44875 4.48251 4.62201 4.70953 4.75854 4.93831 4.98141 5.02147 5.05421 5.08574 5.12988 5.13725 5.21721 5.27613 5.31766 5.58546 5.62410 6.17938 6.29389 6.36359 6.62274 6.65405 7.40779 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.170 4.170 2 C -0.199 4.199 3 C 0.173 3.827 4 O -0.375 6.375 5 C 0.089 3.911 6 H 0.065 0.935 7 C -0.140 4.140 8 C -0.126 4.126 9 C 0.146 3.854 10 H 0.092 0.908 11 N -0.726 5.726 12 C 0.602 3.398 13 O -0.549 6.549 14 C -0.317 4.317 15 C 0.169 3.831 16 C -0.096 4.096 17 C -0.068 4.068 18 C -0.069 4.069 19 O -0.531 6.531 20 Si 0.699 3.301 21 C -0.157 4.157 22 C 0.122 3.878 23 N -0.267 5.267 24 N -0.313 5.313 25 C 0.120 3.880 26 C -0.123 4.123 27 C -0.112 4.112 28 H 0.222 0.778 29 H 0.074 0.926 30 H 0.074 0.926 31 H 0.068 0.932 32 H 0.076 0.924 33 H 0.073 0.927 34 H 0.065 0.935 35 H 0.398 0.602 36 H 0.161 0.839 37 H 0.123 0.877 38 H 0.378 0.622 39 H -0.254 1.254 40 H -0.247 1.247 41 H 0.167 0.833 42 H 0.179 0.821 43 H 0.199 0.801 44 H 0.071 0.929 45 H 0.078 0.922 46 H 0.077 0.923 47 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.567 -2.003 1.162 6.029 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.187 4.187 2 C -0.199 4.199 3 C 0.097 3.903 4 O -0.295 6.295 5 C 0.032 3.968 6 H 0.083 0.917 7 C -0.178 4.178 8 C -0.165 4.165 9 C 0.042 3.958 10 H 0.110 0.890 11 N -0.377 5.377 12 C 0.391 3.609 13 O -0.427 6.427 14 C -0.331 4.331 15 C 0.048 3.952 16 C -0.116 4.116 17 C -0.074 4.074 18 C -0.178 4.178 19 O -0.337 6.337 20 Si 0.598 3.402 21 C -0.178 4.178 22 C -0.004 4.004 23 N -0.031 5.031 24 N -0.133 5.133 25 C -0.061 4.061 26 C -0.161 4.161 27 C -0.151 4.151 28 H 0.239 0.761 29 H 0.092 0.908 30 H 0.092 0.908 31 H 0.087 0.913 32 H 0.095 0.905 33 H 0.092 0.908 34 H 0.084 0.916 35 H 0.232 0.768 36 H 0.178 0.822 37 H 0.140 0.860 38 H 0.226 0.774 39 H -0.179 1.179 40 H -0.171 1.171 41 H 0.184 0.816 42 H 0.197 0.803 43 H 0.215 0.785 44 H 0.090 0.910 45 H 0.097 0.903 46 H 0.096 0.904 47 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 5.497 -1.964 0.123 5.839 hybrid contribution -1.110 -0.416 0.625 1.340 sum 4.387 -2.381 0.748 5.047 Atomic orbital electron populations 1.25052 0.95979 0.97215 1.00434 1.22519 0.93905 1.02455 1.00997 1.19110 0.84822 0.84944 1.01377 1.87995 1.21352 1.25486 1.94681 1.22203 0.80276 0.98791 0.95528 0.91669 1.22010 0.95366 1.03436 0.96980 1.21880 0.95149 0.98019 1.01453 1.21006 0.79381 0.99506 0.95914 0.88966 1.45750 1.07477 1.59289 1.25152 1.16833 0.85313 0.77052 0.81711 1.90789 1.67420 1.48939 1.35575 1.19639 0.94027 1.19358 1.00111 1.19267 0.84351 0.96577 0.94970 1.20707 1.01614 0.97857 0.91399 1.20509 0.93185 0.96649 0.97053 1.25166 1.04577 0.87885 1.00193 1.86609 1.28483 1.23157 1.95412 0.95022 0.89517 0.78731 0.76954 1.20719 0.97395 1.03041 0.96669 1.21598 0.93256 0.95052 0.90518 1.46095 1.05502 1.35593 1.15902 1.77634 1.21230 1.18827 0.95606 1.24064 0.89253 0.94762 0.98016 1.21774 0.95443 1.03140 0.95778 1.21510 0.94561 0.98188 1.00793 0.76076 0.90840 0.90792 0.91347 0.90537 0.90803 0.91597 0.76839 0.82151 0.85988 0.77413 1.17877 1.17057 0.81569 0.80345 0.78488 0.91008 0.90315 0.90449 0.90457 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.28 19.25 29.55 0.57 0.28 16 2 C -0.20 -0.55 13.73 -37.12 -0.51 -1.06 16 3 C 0.17 0.15 6.22 34.37 0.21 0.36 16 4 O -0.38 -0.86 9.95 -35.23 -0.35 -1.21 16 5 C 0.09 -0.02 2.61 -26.73 -0.07 -0.09 16 6 H 0.07 -0.11 7.79 -51.93 -0.40 -0.52 16 7 C -0.14 -0.01 5.54 -26.73 -0.15 -0.15 16 8 C -0.13 0.01 5.49 -26.73 -0.15 -0.14 16 9 C 0.15 -0.02 2.45 -67.93 -0.17 -0.19 16 10 H 0.09 0.19 7.57 -51.92 -0.39 -0.20 16 11 N -0.73 0.19 5.07 -55.15 -0.28 -0.09 16 12 C 0.60 1.86 7.75 -12.90 -0.10 1.76 16 13 O -0.55 -3.54 15.37 5.17 0.08 -3.46 16 14 C -0.32 -0.79 6.17 -104.68 -0.65 -1.44 16 15 C 0.17 0.49 6.76 -84.07 -0.57 -0.08 16 16 C -0.10 -0.19 9.35 -39.53 -0.37 -0.56 16 17 C -0.07 0.05 4.53 -104.54 -0.47 -0.42 16 18 C -0.07 0.09 2.84 36.01 0.10 0.19 16 19 O -0.53 0.58 12.87 -35.23 -0.45 0.12 16 20 Si 0.70 -1.59 31.96 -169.99 -5.43 -7.03 16 21 C -0.16 0.53 8.38 -39.95 -0.33 0.20 16 22 C 0.12 -0.22 11.17 -16.68 -0.19 -0.41 16 23 N -0.27 -0.46 3.86 -10.55 -0.04 -0.50 16 24 N -0.31 -0.72 12.57 30.75 0.39 -0.33 16 25 C 0.12 0.06 11.44 -17.14 -0.20 -0.13 16 26 C -0.12 0.26 5.39 -26.73 -0.14 0.12 16 27 C -0.11 0.10 5.57 -26.73 -0.15 -0.05 16 28 H 0.22 -0.40 7.80 -54.08 -0.42 -0.82 16 29 H 0.07 -0.04 7.87 -51.93 -0.41 -0.45 16 30 H 0.07 -0.07 8.09 -51.93 -0.42 -0.49 16 31 H 0.07 -0.01 7.87 -51.93 -0.41 -0.42 16 32 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 33 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 34 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 35 H 0.40 -1.26 7.52 -40.82 -0.31 -1.57 16 36 H 0.16 0.46 7.01 -52.49 -0.37 0.09 16 37 H 0.12 -0.06 7.71 -51.93 -0.40 -0.46 16 38 H 0.38 -2.21 8.08 45.56 0.37 -1.84 16 39 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 40 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 41 H 0.17 -1.33 7.31 -52.49 -0.38 -1.71 16 42 H 0.18 -0.87 8.06 -52.48 -0.42 -1.30 16 43 H 0.20 -0.75 7.46 -52.49 -0.39 -1.14 16 44 H 0.07 -0.24 8.14 -51.93 -0.42 -0.67 16 45 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 46 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 47 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 LS Contribution 397.65 15.07 5.99 5.99 Total: 0.00 -12.19 397.65 -9.94 -22.13 By element: Atomic # 1 Polarization: -7.30 SS G_CDS: -6.52 Total: -13.82 kcal Atomic # 6 Polarization: 1.51 SS G_CDS: -3.32 Total: -1.81 kcal Atomic # 7 Polarization: -0.99 SS G_CDS: 0.07 Total: -0.92 kcal Atomic # 8 Polarization: -3.82 SS G_CDS: -0.72 Total: -4.55 kcal Atomic # 14 Polarization: -1.59 SS G_CDS: -5.43 Total: -7.03 kcal Total LS contribution 5.99 Total: 5.99 kcal Total: -12.19 -9.94 -22.13 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_11618758.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 67.976 kcal (2) G-P(sol) polarization free energy of solvation -12.191 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 55.785 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.940 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.131 kcal (6) G-S(sol) free energy of system = (1) + (5) 45.845 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds