Wall clock time and date at job start Sun Mar 7 2021 02:47:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17399 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 O 1.42890 * 109.47174 * 342.87820 * 3 2 1 5 5 C 1.42904 * 113.99781 * 179.97438 * 4 3 2 6 6 H 1.08997 * 109.47227 * 30.00041 * 5 4 3 7 7 C 1.53007 * 109.46984 * 150.00189 * 5 4 3 8 8 C 1.52995 * 109.46845 * 180.02562 * 7 5 4 9 9 C 1.53004 * 109.47371 * 299.99559 * 8 7 5 10 10 H 1.08997 * 109.47105 * 300.00453 * 9 8 7 11 11 N 1.46498 * 109.47243 * 180.02562 * 9 8 7 12 12 C 1.34771 * 119.99896 * 155.00584 * 11 9 8 13 13 O 1.21699 * 120.00498 * 359.97438 * 12 11 9 14 14 C 1.46678 * 120.00141 * 179.97438 * 12 11 9 15 15 C 1.37874 * 126.23754 * 179.97438 * 14 12 11 16 16 C 1.50699 * 126.45574 * 359.97438 * 15 14 12 17 17 C 1.39837 * 107.08731 * 179.97438 * 15 14 12 18 18 C 1.50699 * 126.06364 * 180.02562 * 17 15 14 19 19 O 1.42898 * 109.47127 * 67.98194 * 18 17 15 20 20 Si 1.86290 * 109.47277 * 307.97702 * 18 17 15 21 21 C 1.35451 * 107.86283 * 359.97438 * 17 15 14 22 22 C 1.50702 * 125.56266 * 179.73617 * 21 17 15 23 23 N 1.35532 * 108.87199 * 0.02562 * 21 17 15 24 24 C 1.53007 * 109.46776 * 60.00398 * 9 8 7 25 25 C 1.53001 * 109.47024 * 269.99851 * 5 4 3 26 26 H 4.38447 * 5.44350 * 179.97438 * 4 1 2 27 27 H 1.09000 * 109.46705 * 222.87473 * 3 2 1 28 28 H 1.09004 * 109.46929 * 102.88040 * 3 2 1 29 29 H 1.09005 * 109.47056 * 60.00178 * 7 5 4 30 30 H 1.08996 * 109.46781 * 300.00086 * 7 5 4 31 31 H 1.09000 * 109.47259 * 180.02562 * 8 7 5 32 32 H 1.08997 * 109.47376 * 59.99846 * 8 7 5 33 33 H 0.97002 * 119.99894 * 334.99742 * 11 9 8 34 34 H 1.08993 * 109.47039 * 269.99706 * 16 15 14 35 35 H 1.09008 * 109.47257 * 29.99918 * 16 15 14 36 36 H 1.09005 * 109.47381 * 149.99273 * 16 15 14 37 37 H 1.09005 * 109.46657 * 187.97715 * 18 17 15 38 38 H 0.96696 * 114.00494 * 299.99393 * 19 18 17 39 39 H 1.48501 * 110.00060 * 184.85825 * 20 18 17 40 40 H 1.48502 * 110.00328 * 306.17834 * 20 18 17 41 41 H 1.09000 * 109.47107 * 84.69697 * 22 21 17 42 42 H 1.08998 * 109.47547 * 204.69832 * 22 21 17 43 43 H 1.09004 * 109.46930 * 324.69439 * 22 21 17 44 44 H 0.97005 * 125.67032 * 179.97438 * 23 21 17 45 45 H 1.08997 * 109.47259 * 60.00149 * 24 9 8 46 46 H 1.08996 * 109.46781 * 179.97438 * 24 9 8 47 47 H 1.08997 * 109.47274 * 300.00162 * 25 5 4 48 48 H 1.08997 * 109.47138 * 60.00349 * 25 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 8 3.1229 -1.2866 0.3966 5 6 4.5475 -1.3939 0.4293 6 1 4.9797 -0.4220 0.6672 7 6 4.9581 -2.4100 1.4970 8 6 6.4833 -2.5244 1.5324 9 6 6.9920 -2.9873 0.1656 10 1 6.5601 -3.9593 -0.0726 11 7 8.4524 -3.0974 0.1997 12 6 9.0854 -3.9293 -0.6509 13 8 8.4439 -4.5893 -1.4471 14 6 10.5477 -4.0391 -0.6172 15 6 11.3233 -4.8450 -1.4234 16 6 10.8285 -5.7756 -2.5006 17 6 12.6555 -4.6363 -1.0532 18 6 13.8608 -5.3043 -1.6631 19 8 14.0287 -4.8489 -3.0071 20 14 13.6158 -7.1510 -1.6590 21 6 12.6702 -3.7263 -0.0500 22 6 13.9021 -3.2147 0.6513 23 7 11.3958 -3.3556 0.2244 24 6 6.5814 -1.9712 -0.9021 25 6 5.0555 -1.8571 -0.9376 26 1 -1.0499 -0.0002 0.0003 27 1 3.0089 0.7540 0.6992 28 1 3.0092 0.2299 -1.0019 29 1 4.5259 -3.3819 1.2590 30 1 4.5961 -2.0800 2.4707 31 1 6.7759 -3.2485 2.2927 32 1 6.9152 -1.5524 1.7706 33 1 8.9637 -2.5715 0.8344 34 1 10.6367 -6.7589 -2.0713 35 1 9.9071 -5.3796 -2.9278 36 1 11.5837 -5.8612 -3.2820 37 1 14.7480 -5.0542 -1.0812 38 1 13.2757 -5.0380 -3.5835 39 1 14.8437 -7.8274 -2.1491 40 1 13.2923 -7.6175 -0.2868 41 1 14.3304 -2.3916 0.0793 42 1 13.6337 -2.8638 1.6477 43 1 14.6333 -4.0189 0.7341 44 1 11.1262 -2.7154 0.9014 45 1 7.0132 -0.9992 -0.6639 46 1 6.9441 -2.3008 -1.8757 47 1 4.6233 -2.8290 -1.1756 48 1 4.7630 -1.1333 -1.6983 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14940684_12297754.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:47:09 Heat of formation + Delta-G solvation = -25.357616 kcal Electronic energy + Delta-G solvation = -28571.971522 eV Core-core repulsion = 24595.270021 eV Total energy + Delta-G solvation = -3976.701501 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.177 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -42.68277 -40.95613 -39.76707 -37.87751 -37.67969 -35.14885 -33.98866 -33.72812 -32.92841 -31.99814 -30.11005 -29.29821 -27.93821 -27.15612 -26.22868 -23.98615 -23.44057 -22.11168 -21.40847 -20.83290 -20.15028 -19.50059 -19.16835 -17.96036 -17.63834 -17.35288 -16.87153 -16.59725 -16.42682 -16.31763 -15.74774 -15.46382 -15.16658 -15.03229 -14.95035 -14.72958 -14.36901 -14.32736 -14.08710 -13.96476 -13.77617 -13.71395 -13.52477 -13.36142 -13.27057 -13.17203 -12.76181 -12.68213 -12.39788 -12.28786 -12.20956 -11.89958 -11.83930 -11.72894 -11.37728 -11.29165 -10.90087 -10.48312 -10.46512 -10.17612 -9.55117 -8.99618 -4.85683 0.40572 1.27713 1.52246 1.61368 1.83994 1.85825 1.92389 2.01323 2.12592 2.36514 2.83598 3.43702 3.46843 3.61727 3.64552 3.72167 3.76858 3.89644 3.96732 4.00966 4.02328 4.03581 4.10030 4.21085 4.27006 4.30111 4.31017 4.37447 4.38831 4.47033 4.50987 4.56839 4.65166 4.77296 4.83103 4.88989 4.91354 4.97260 4.99127 4.99704 5.05016 5.13450 5.15660 5.19301 5.33372 5.41505 5.69247 5.90616 6.11983 6.25383 6.43795 6.62161 6.71587 7.14795 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.200 4.200 3 C 0.173 3.827 4 O -0.375 6.375 5 C 0.089 3.911 6 H 0.065 0.935 7 C -0.112 4.112 8 C -0.123 4.123 9 C 0.145 3.855 10 H 0.095 0.905 11 N -0.731 5.731 12 C 0.593 3.407 13 O -0.520 6.520 14 C -0.061 4.061 15 C -0.058 4.058 16 C -0.099 4.099 17 C -0.209 4.209 18 C -0.028 4.028 19 O -0.542 6.542 20 Si 0.678 3.322 21 C 0.079 3.921 22 C -0.095 4.095 23 N -0.537 5.537 24 C -0.126 4.126 25 C -0.139 4.139 26 H 0.223 0.777 27 H 0.074 0.926 28 H 0.074 0.926 29 H 0.078 0.922 30 H 0.077 0.923 31 H 0.077 0.923 32 H 0.070 0.930 33 H 0.392 0.608 34 H 0.078 0.922 35 H 0.091 0.909 36 H 0.066 0.934 37 H 0.108 0.892 38 H 0.375 0.625 39 H -0.255 1.255 40 H -0.258 1.258 41 H 0.082 0.918 42 H 0.069 0.931 43 H 0.084 0.916 44 H 0.415 0.585 45 H 0.064 0.936 46 H 0.075 0.925 47 H 0.077 0.923 48 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.255 3.600 2.808 4.573 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.185 4.185 2 C -0.200 4.200 3 C 0.098 3.902 4 O -0.295 6.295 5 C 0.032 3.968 6 H 0.083 0.917 7 C -0.150 4.150 8 C -0.161 4.161 9 C 0.041 3.959 10 H 0.114 0.886 11 N -0.382 5.382 12 C 0.381 3.619 13 O -0.396 6.396 14 C -0.172 4.172 15 C -0.067 4.067 16 C -0.156 4.156 17 C -0.215 4.215 18 C -0.140 4.140 19 O -0.348 6.348 20 Si 0.580 3.420 21 C -0.039 4.039 22 C -0.153 4.153 23 N -0.134 5.134 24 C -0.165 4.165 25 C -0.178 4.178 26 H 0.239 0.761 27 H 0.092 0.908 28 H 0.092 0.908 29 H 0.097 0.903 30 H 0.096 0.904 31 H 0.096 0.904 32 H 0.089 0.911 33 H 0.226 0.774 34 H 0.096 0.904 35 H 0.110 0.890 36 H 0.085 0.915 37 H 0.126 0.874 38 H 0.223 0.777 39 H -0.180 1.180 40 H -0.183 1.183 41 H 0.101 0.899 42 H 0.088 0.912 43 H 0.103 0.897 44 H 0.252 0.748 45 H 0.083 0.917 46 H 0.094 0.906 47 H 0.096 0.904 48 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges 0.411 2.469 2.930 3.854 hybrid contribution 0.214 1.537 1.084 1.892 sum 0.625 4.006 4.014 5.705 Atomic orbital electron populations 1.25051 0.95982 0.97388 1.00113 1.22501 0.93889 1.02409 1.01174 1.19108 0.84852 0.86122 1.00144 1.87999 1.21219 1.31239 1.89006 1.22196 0.80387 0.98974 0.95253 0.91721 1.21506 0.94338 1.00248 0.98956 1.21776 0.95683 1.02262 0.96426 1.21069 0.78930 1.00694 0.95219 0.88649 1.45949 1.07969 1.45309 1.38946 1.16992 0.84922 0.79310 0.80695 1.90841 1.65967 1.44825 1.37933 1.20043 0.89788 1.05614 1.01749 1.19752 0.91141 0.98038 0.97759 1.20437 1.02079 0.97780 0.95293 1.19502 0.94843 1.04675 1.02490 1.24278 0.96176 1.08874 0.84669 1.86495 1.45245 1.83829 1.19213 0.94601 0.86082 0.75484 0.85815 1.20307 0.85374 0.98830 0.99367 1.20490 0.92994 1.02324 0.99471 1.41823 1.05823 1.35287 1.30491 1.21887 0.95351 0.99199 1.00055 1.22018 0.95160 1.03289 0.97318 0.76066 0.90823 0.90803 0.90337 0.90413 0.90389 0.91146 0.77434 0.90376 0.89023 0.91543 0.87436 0.77684 1.17956 1.18282 0.89891 0.91218 0.89749 0.74793 0.91696 0.90610 0.90392 0.91199 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.21 19.25 29.55 0.57 0.36 16 2 C -0.20 -0.46 13.73 -37.12 -0.51 -0.97 16 3 C 0.17 0.06 6.22 34.37 0.21 0.27 16 4 O -0.38 -0.63 9.95 -35.23 -0.35 -0.98 16 5 C 0.09 -0.09 2.61 -26.73 -0.07 -0.16 16 6 H 0.06 -0.15 7.79 -51.93 -0.40 -0.56 16 7 C -0.11 0.18 5.57 -26.73 -0.15 0.03 16 8 C -0.12 0.37 5.39 -26.73 -0.14 0.22 16 9 C 0.14 -0.18 2.45 -67.93 -0.17 -0.35 16 10 H 0.10 0.08 7.57 -51.93 -0.39 -0.31 16 11 N -0.73 1.08 5.07 -55.11 -0.28 0.80 16 12 C 0.59 0.94 7.75 -12.86 -0.10 0.84 16 13 O -0.52 -2.42 14.46 5.19 0.08 -2.34 16 14 C -0.06 -0.06 7.06 -81.98 -0.58 -0.64 16 15 C -0.06 -0.08 5.84 -104.16 -0.61 -0.69 16 16 C -0.10 0.00 7.98 36.01 0.29 0.29 16 17 C -0.21 -0.22 4.71 -105.02 -0.50 -0.72 16 18 C -0.03 -0.02 2.86 36.00 0.10 0.08 16 19 O -0.54 -0.76 12.88 -35.23 -0.45 -1.21 16 20 Si 0.68 0.40 29.57 -169.99 -5.03 -4.63 16 21 C 0.08 -0.01 7.13 -81.95 -0.58 -0.60 16 22 C -0.10 0.24 9.99 36.01 0.36 0.60 16 23 N -0.54 0.71 5.99 -5.70 -0.03 0.68 16 24 C -0.13 0.14 5.50 -26.70 -0.15 -0.01 16 25 C -0.14 0.11 5.54 -26.70 -0.15 -0.04 16 26 H 0.22 -0.49 7.80 -54.10 -0.42 -0.91 16 27 H 0.07 -0.11 8.09 -51.93 -0.42 -0.53 16 28 H 0.07 -0.09 7.87 -51.93 -0.41 -0.49 16 29 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 30 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 31 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 32 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 33 H 0.39 -1.63 7.73 -40.82 -0.32 -1.95 16 34 H 0.08 -0.04 7.65 -51.93 -0.40 -0.44 16 35 H 0.09 0.14 6.48 -51.92 -0.34 -0.20 16 36 H 0.07 -0.17 5.29 -51.93 -0.27 -0.45 16 37 H 0.11 0.04 6.66 -51.93 -0.35 -0.31 16 38 H 0.38 -0.66 6.89 45.56 0.31 -0.34 16 39 H -0.25 -0.82 7.11 56.52 0.40 -0.42 16 40 H -0.26 -0.86 7.11 56.52 0.40 -0.46 16 41 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 42 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 43 H 0.08 -0.23 7.24 -51.93 -0.38 -0.60 16 44 H 0.41 -1.88 8.19 -40.82 -0.33 -2.21 16 45 H 0.06 -0.13 8.14 -51.93 -0.42 -0.55 16 46 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 47 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 48 H 0.07 -0.07 7.87 -51.93 -0.41 -0.48 16 LS Contribution 388.11 15.07 5.85 5.85 Total: 0.00 -9.09 388.11 -9.91 -19.00 By element: Atomic # 1 Polarization: -8.17 SS G_CDS: -7.52 Total: -15.69 kcal Atomic # 6 Polarization: 0.69 SS G_CDS: -2.17 Total: -1.48 kcal Atomic # 7 Polarization: 1.80 SS G_CDS: -0.31 Total: 1.49 kcal Atomic # 8 Polarization: -3.80 SS G_CDS: -0.73 Total: -4.53 kcal Atomic # 14 Polarization: 0.40 SS G_CDS: -5.03 Total: -4.63 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -9.09 -9.91 -19.00 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14940684_12297754.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.358 kcal (2) G-P(sol) polarization free energy of solvation -9.088 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.446 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.912 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.000 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.358 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds